Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05685

Experiment: Dodecandioic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dodecandioic (C)
1,205,793	-				+0.9
1,205,802	+				-1.7
1,205,803	-				-0.6
1,205,803	-				+0.9
1,205,803	-				-0.8
1,205,992	-		ABZR87_RS05680	0.24	+1.1
1,206,002	+		ABZR87_RS05680	0.26	+0.4
1,206,003	-		ABZR87_RS05680	0.26	+1.2
1,206,003	-		ABZR87_RS05680	0.26	-1.2
1,206,036	+		ABZR87_RS05680	0.29	-0.6
1,206,109	-		ABZR87_RS05680	0.37	+0.8
1,206,109	-		ABZR87_RS05680	0.37	-0.3
1,206,369	+		ABZR87_RS05680	0.63	-0.0
1,206,369	+		ABZR87_RS05680	0.63	+1.9
1,206,369	+		ABZR87_RS05680	0.63	-1.6
1,206,369	+		ABZR87_RS05680	0.63	+0.5
1,206,369	+		ABZR87_RS05680	0.63	-0.2
1,206,369	+		ABZR87_RS05680	0.63	-0.3
1,206,370	-		ABZR87_RS05680	0.63	+0.5
1,206,370	-		ABZR87_RS05680	0.63	+0.2
1,206,370	-		ABZR87_RS05680	0.63	-1.8
1,206,370	-		ABZR87_RS05680	0.63	+0.9
1,206,370	-		ABZR87_RS05680	0.63	+0.7
1,206,370	-		ABZR87_RS05680	0.63	+0.2
1,206,370	-		ABZR87_RS05680	0.63	-0.6
1,206,370	-		ABZR87_RS05680	0.63	+0.2
1,206,405	+		ABZR87_RS05680	0.67	-0.5
1,206,405	+		ABZR87_RS05680	0.67	-1.1
1,206,406	-		ABZR87_RS05680	0.67	-0.0
1,206,406	-		ABZR87_RS05680	0.67	+0.9
1,206,406	-		ABZR87_RS05680	0.67	-1.1
1,206,415	-		ABZR87_RS05680	0.68	-1.3
1,206,415	-		ABZR87_RS05680	0.68	+0.2
1,206,499	+		ABZR87_RS05680	0.77	-0.5
1,206,499	+		ABZR87_RS05680	0.77	-0.0
1,206,499	+		ABZR87_RS05680	0.77	-0.6
1,206,708	+				+1.2
1,206,708	+				+0.5
1,206,708	+				-1.2
1,206,709	-				+0.3
1,206,709	-				-0.8
1,206,709	-				-0.3
1,206,962	+		ABZR87_RS05685	0.20	-0.8
1,206,963	-		ABZR87_RS05685	0.20	+0.3
1,206,963	-		ABZR87_RS05685	0.20	+0.1
1,207,283	+		ABZR87_RS05685	0.48	-0.2
1,207,283	+		ABZR87_RS05685	0.48	-0.1
1,207,283	+		ABZR87_RS05685	0.48	+0.4
1,207,283	+		ABZR87_RS05685	0.48	+0.2
1,207,283	+		ABZR87_RS05685	0.48	+0.7
1,207,284	-		ABZR87_RS05685	0.48	-0.6
1,207,284	-		ABZR87_RS05685	0.48	-0.1
1,207,284	-		ABZR87_RS05685	0.48	+1.3
1,207,284	-		ABZR87_RS05685	0.48	+0.2
1,207,307	+		ABZR87_RS05685	0.50	+0.3
1,207,307	+		ABZR87_RS05685	0.50	-0.4
1,207,308	-		ABZR87_RS05685	0.50	+0.3
1,207,308	-		ABZR87_RS05685	0.50	+0.5
1,207,466	+		ABZR87_RS05685	0.63	-0.8
1,207,466	+		ABZR87_RS05685	0.63	+0.8
1,207,467	-		ABZR87_RS05685	0.63	-0.8
1,207,467	-		ABZR87_RS05685	0.63	-0.1
1,207,467	-		ABZR87_RS05685	0.63	+0.2
1,207,467	-		ABZR87_RS05685	0.63	-2.0
1,207,559	+		ABZR87_RS05685	0.71	-0.3
1,207,559	+		ABZR87_RS05685	0.71	+1.5
1,207,559	+		ABZR87_RS05685	0.71	+0.7
1,207,559	+		ABZR87_RS05685	0.71	+0.4
1,207,559	+		ABZR87_RS05685	0.71	+0.9
1,207,559	+		ABZR87_RS05685	0.71	-0.2
1,207,559	+		ABZR87_RS05685	0.71	+2.0
1,207,559	+		ABZR87_RS05685	0.71	-0.3
1,207,560	-		ABZR87_RS05685	0.71	+0.0
1,207,560	-		ABZR87_RS05685	0.71	-0.2
1,207,560	-		ABZR87_RS05685	0.71	+0.6
1,207,560	-		ABZR87_RS05685	0.71	+0.5
1,207,560	-		ABZR87_RS05685	0.71	+0.0
1,207,580	-		ABZR87_RS05685	0.73	+1.9
1,207,580	-		ABZR87_RS05685	0.73	-0.5
1,207,580	-		ABZR87_RS05685	0.73	+1.0
1,207,661	+		ABZR87_RS05685	0.80	-1.2
1,207,661	+		ABZR87_RS05685	0.80	+1.3
1,207,661	+		ABZR87_RS05685	0.80	-0.6
1,207,661	+		ABZR87_RS05685	0.80	+0.7
1,207,662	-		ABZR87_RS05685	0.80	-1.9
1,207,662	-		ABZR87_RS05685	0.80	+1.2
1,207,662	-		ABZR87_RS05685	0.80	+0.1
1,207,662	-		ABZR87_RS05685	0.80	+0.8
1,207,662	-		ABZR87_RS05685	0.80	+1.1
1,207,662	-		ABZR87_RS05685	0.80	+0.1
1,207,662	-		ABZR87_RS05685	0.80	-0.8
1,207,757	+		ABZR87_RS05685	0.88	+0.7
1,207,757	+		ABZR87_RS05685	0.88	+0.4
1,207,757	+		ABZR87_RS05685	0.88	-0.4
1,207,758	-		ABZR87_RS05685	0.88	+0.5
1,207,844	-				-1.2
1,207,878	-				-2.4
1,207,878	-				+0.7
1,207,878	-				+1.3
1,207,878	-				+0.7
1,207,904	+				+0.2
1,207,904	+				+1.2
1,207,904	+				+0.2
1,207,904	+				-0.8
1,207,904	+				+0.8
1,207,905	-				+0.6
1,207,905	-				+1.7
1,207,905	-				-0.5
1,207,905	-				+0.7
1,207,905	-				-0.4
1,207,978	+				+2.7
1,207,978	+				-0.2
1,207,978	+				+1.5
1,208,054	+				-1.4
1,208,119	+		ABZR87_RS05690	0.12	+0.3
1,208,119	+		ABZR87_RS05690	0.12	+0.6
1,208,141	+		ABZR87_RS05690	0.14	+0.9
1,208,141	+		ABZR87_RS05690	0.14	-0.1
1,208,141	+		ABZR87_RS05690	0.14	+2.5
1,208,141	+		ABZR87_RS05690	0.14	-0.3
1,208,142	-		ABZR87_RS05690	0.14	+0.5
1,208,142	-		ABZR87_RS05690	0.14	-0.1
1,208,242	+		ABZR87_RS05690	0.19	-1.9
1,208,243	-		ABZR87_RS05690	0.19	-0.4
1,208,243	-		ABZR87_RS05690	0.19	-0.4
1,208,300	+		ABZR87_RS05690	0.23	+0.3
1,208,307	+		ABZR87_RS05690	0.23	-0.0
1,208,308	-		ABZR87_RS05690	0.23	-0.6
1,208,624	+		ABZR87_RS05690	0.41	+1.2
1,208,625	-		ABZR87_RS05690	0.41	+0.7
1,208,631	+		ABZR87_RS05690	0.42	+0.7
1,208,631	+		ABZR87_RS05690	0.42	-0.1
1,208,631	+		ABZR87_RS05690	0.42	-0.8
1,208,631	+		ABZR87_RS05690	0.42	-2.6
1,208,632	-		ABZR87_RS05690	0.42	+0.1
1,208,632	-		ABZR87_RS05690	0.42	-0.6
1,208,655	+		ABZR87_RS05690	0.43	+0.7
1,208,655	+		ABZR87_RS05690	0.43	+0.1
1,208,656	-		ABZR87_RS05690	0.43	-0.2
1,208,656	-		ABZR87_RS05690	0.43	-1.4
1,208,656	-		ABZR87_RS05690	0.43	-0.7
1,208,666	+		ABZR87_RS05690	0.44	+0.3
1,208,717	+		ABZR87_RS05690	0.47	+0.2
1,208,727	+		ABZR87_RS05690	0.47	+1.1
1,208,727	+		ABZR87_RS05690	0.47	-0.6
1,208,727	+		ABZR87_RS05690	0.47	-1.5
1,208,728	-		ABZR87_RS05690	0.47	+0.6