Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS05380 and ABZR87_RS05385 are separated by 276 nucleotides ABZR87_RS05385 and ABZR87_RS05390 are separated by 128 nucleotides
ABZR87_RS05380: ABZR87_RS05380 - chromosomal replication initiator protein DnaA, at 1,131,639 to 1,133,228
_RS05380
ABZR87_RS05385: ABZR87_RS05385 - DNA polymerase III subunit beta, at 1,133,505 to 1,134,620
_RS05385
ABZR87_RS05390: ABZR87_RS05390 - DNA topoisomerase (ATP-hydrolyzing) subunit B, at 1,134,749 to 1,137,277
_RS05390
Position (kb)
1133
1134
1135 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.326 kb on - strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1134.595 kb on - strand at 1134.685 kb on + strand at 1134.685 kb on + strand at 1134.712 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,133,325 + -0.4 1,133,325 + +0.2 1,133,325 + -0.1 1,133,325 + +0.8 1,133,326 - +0.8 1,133,331 + +1.4 1,133,331 + -1.0 1,133,331 + -1.2 1,133,331 + +0.8 1,133,331 + +0.0 1,133,331 + +0.9 1,133,331 + +3.0 1,133,331 + -1.0 1,133,331 + +1.9 1,133,331 + +0.3 1,133,332 - -0.8 1,133,332 - -2.3 1,133,332 - +0.1 1,133,332 - -0.2 1,133,332 - -0.0 1,133,332 - -0.6 1,133,332 - -0.6 1,134,595 - +1.6 1,134,685 + +1.1 1,134,685 + -0.3 1,134,712 + +0.7
Or see this region's nucleotide sequence