Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS05030 and ABZR87_RS05035 are separated by 491 nucleotides ABZR87_RS05035 and ABZR87_RS05040 are separated by 98 nucleotides ABZR87_RS05040 and ABZR87_RS05045 are separated by 38 nucleotides ABZR87_RS05045 and ABZR87_RS05050 overlap by 1 nucleotides
ABZR87_RS05030: ABZR87_RS05030 - rod shape-determining protein, at 1,059,770 to 1,060,813
_RS05030
ABZR87_RS05035: ABZR87_RS05035 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC, at 1,061,305 to 1,061,604
_RS05035
ABZR87_RS05040: ABZR87_RS05040 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA, at 1,061,703 to 1,063,190
_RS05040
ABZR87_RS05045: ABZR87_RS05045 - hypothetical protein, at 1,063,229 to 1,063,711
_RS05045
ABZR87_RS05050: ABZR87_RS05050 - dienelactone hydrolase family protein, at 1,063,711 to 1,064,673
_RS05050
Position (kb)
1061
1062
1063
1064 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1060.925 kb on - strand at 1061.042 kb on - strand at 1061.042 kb on - strand at 1061.042 kb on - strand at 1061.042 kb on - strand at 1061.042 kb on - strand at 1061.042 kb on - strand at 1061.089 kb on + strand at 1061.090 kb on - strand at 1061.093 kb on + strand at 1061.093 kb on + strand at 1061.093 kb on + strand at 1061.094 kb on - strand at 1061.094 kb on - strand at 1061.094 kb on - strand at 1061.094 kb on - strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.155 kb on + strand at 1061.156 kb on - strand at 1061.156 kb on - strand at 1061.156 kb on - strand at 1061.156 kb on - strand at 1061.160 kb on + strand at 1061.161 kb on - strand at 1061.161 kb on - strand at 1061.161 kb on - strand at 1061.162 kb on + strand at 1061.162 kb on + strand at 1061.162 kb on + strand at 1061.249 kb on + strand at 1061.697 kb on + strand at 1061.697 kb on + strand at 1061.697 kb on + strand at 1061.697 kb on + strand at 1061.697 kb on + strand at 1063.379 kb on + strand, within ABZR87_RS05045 at 1063.426 kb on + strand, within ABZR87_RS05045 at 1063.426 kb on + strand, within ABZR87_RS05045 at 1063.426 kb on + strand, within ABZR87_RS05045 at 1063.556 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.646 kb on + strand, within ABZR87_RS05045 at 1063.850 kb on + strand, within ABZR87_RS05050 at 1063.996 kb on + strand, within ABZR87_RS05050 at 1063.998 kb on + strand, within ABZR87_RS05050 at 1063.998 kb on + strand, within ABZR87_RS05050 at 1064.154 kb on + strand, within ABZR87_RS05050
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,060,925 - +3.8 1,061,042 - +2.4 1,061,042 - +0.5 1,061,042 - +2.2 1,061,042 - +2.0 1,061,042 - +0.1 1,061,042 - +0.6 1,061,089 + +3.0 1,061,090 - -1.0 1,061,093 + +3.3 1,061,093 + +4.6 1,061,093 + +3.6 1,061,094 - -1.9 1,061,094 - +0.1 1,061,094 - +2.1 1,061,094 - -1.2 1,061,155 + +3.8 1,061,155 + +3.8 1,061,155 + +3.8 1,061,155 + +3.3 1,061,155 + +4.5 1,061,155 + +3.0 1,061,155 + +2.6 1,061,155 + +4.2 1,061,155 + +2.9 1,061,156 - +0.4 1,061,156 - -1.0 1,061,156 - -1.3 1,061,156 - +0.7 1,061,160 + +2.9 1,061,161 - +0.2 1,061,161 - +1.4 1,061,161 - +1.8 1,061,162 + +2.7 1,061,162 + +0.9 1,061,162 + +1.8 1,061,249 + +1.7 1,061,697 + +0.2 1,061,697 + -0.1 1,061,697 + +1.2 1,061,697 + -0.4 1,061,697 + +1.2 1,063,379 + ABZR87_RS05045 0.31 -1.6 1,063,426 + ABZR87_RS05045 0.41 +1.2 1,063,426 + ABZR87_RS05045 0.41 +0.9 1,063,426 + ABZR87_RS05045 0.41 -0.2 1,063,556 + ABZR87_RS05045 0.68 -0.3 1,063,646 + ABZR87_RS05045 0.86 -0.2 1,063,646 + ABZR87_RS05045 0.86 +0.5 1,063,646 + ABZR87_RS05045 0.86 +0.2 1,063,646 + ABZR87_RS05045 0.86 +0.4 1,063,646 + ABZR87_RS05045 0.86 +0.0 1,063,646 + ABZR87_RS05045 0.86 +0.9 1,063,646 + ABZR87_RS05045 0.86 -0.6 1,063,646 + ABZR87_RS05045 0.86 +0.8 1,063,646 + ABZR87_RS05045 0.86 +0.4 1,063,850 + ABZR87_RS05050 0.14 +1.7 1,063,996 + ABZR87_RS05050 0.30 +0.1 1,063,998 + ABZR87_RS05050 0.30 +1.2 1,063,998 + ABZR87_RS05050 0.30 +1.0 1,064,154 + ABZR87_RS05050 0.46 -0.4
Or see this region's nucleotide sequence