Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04055 and ABZR87_RS04060 are separated by 567 nucleotides ABZR87_RS04060 and ABZR87_RS04065 are separated by 99 nucleotides ABZR87_RS04065 and ABZR87_RS04070 are separated by 91 nucleotides
ABZR87_RS04055: ABZR87_RS04055 - RsiV family protein, at 849,581 to 850,723
_RS04055
ABZR87_RS04060: ABZR87_RS04060 - DUF6600 domain-containing protein, at 851,291 to 853,672
_RS04060
ABZR87_RS04065: ABZR87_RS04065 - F0F1 ATP synthase subunit epsilon, at 853,772 to 854,188
_RS04065
ABZR87_RS04070: ABZR87_RS04070 - F0F1 ATP synthase subunit beta, at 854,280 to 855,689
_RS04070
Position (kb) 851
852
853
854 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.360 kb on - strand, within ABZR87_RS04055 at 850.428 kb on + strand, within ABZR87_RS04055 at 850.429 kb on - strand, within ABZR87_RS04055 at 850.429 kb on - strand, within ABZR87_RS04055 at 850.475 kb on + strand, within ABZR87_RS04055 at 850.476 kb on - strand, within ABZR87_RS04055 at 850.664 kb on - strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.735 kb on - strand at 850.735 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.891 kb on - strand at 850.891 kb on - strand at 850.891 kb on - strand at 850.929 kb on + strand at 851.065 kb on + strand at 851.065 kb on + strand at 851.066 kb on - strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.240 kb on + strand at 851.274 kb on - strand at 851.355 kb on + strand at 851.356 kb on - strand at 851.371 kb on - strand at 851.446 kb on - strand at 851.632 kb on + strand, within ABZR87_RS04060 at 851.632 kb on + strand, within ABZR87_RS04060 at 851.633 kb on - strand, within ABZR87_RS04060 at 851.633 kb on - strand, within ABZR87_RS04060 at 851.673 kb on + strand, within ABZR87_RS04060 at 851.674 kb on - strand, within ABZR87_RS04060 at 851.751 kb on - strand, within ABZR87_RS04060 at 851.819 kb on + strand, within ABZR87_RS04060 at 851.819 kb on + strand, within ABZR87_RS04060 at 851.820 kb on - strand, within ABZR87_RS04060 at 851.820 kb on - strand, within ABZR87_RS04060 at 851.982 kb on - strand, within ABZR87_RS04060 at 851.982 kb on - strand, within ABZR87_RS04060 at 852.183 kb on - strand, within ABZR87_RS04060 at 852.183 kb on - strand, within ABZR87_RS04060 at 852.183 kb on - strand, within ABZR87_RS04060 at 852.197 kb on + strand, within ABZR87_RS04060 at 852.197 kb on + strand, within ABZR87_RS04060 at 852.198 kb on - strand, within ABZR87_RS04060 at 852.198 kb on - strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.251 kb on + strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.252 kb on - strand, within ABZR87_RS04060 at 852.371 kb on + strand, within ABZR87_RS04060 at 852.371 kb on + strand, within ABZR87_RS04060 at 852.383 kb on + strand, within ABZR87_RS04060 at 852.383 kb on + strand, within ABZR87_RS04060 at 852.383 kb on + strand, within ABZR87_RS04060 at 852.383 kb on + strand, within ABZR87_RS04060 at 852.384 kb on - strand, within ABZR87_RS04060 at 852.384 kb on - strand, within ABZR87_RS04060 at 852.384 kb on - strand, within ABZR87_RS04060 at 852.384 kb on - strand, within ABZR87_RS04060 at 852.384 kb on - strand, within ABZR87_RS04060 at 852.401 kb on + strand, within ABZR87_RS04060 at 852.401 kb on + strand, within ABZR87_RS04060 at 852.402 kb on - strand, within ABZR87_RS04060 at 852.402 kb on - strand, within ABZR87_RS04060 at 852.402 kb on - strand, within ABZR87_RS04060 at 852.405 kb on + strand, within ABZR87_RS04060 at 852.405 kb on + strand, within ABZR87_RS04060 at 852.406 kb on - strand, within ABZR87_RS04060 at 852.406 kb on - strand, within ABZR87_RS04060 at 852.406 kb on - strand, within ABZR87_RS04060 at 852.406 kb on - strand, within ABZR87_RS04060 at 852.406 kb on - strand, within ABZR87_RS04060 at 852.509 kb on + strand, within ABZR87_RS04060 at 852.509 kb on + strand, within ABZR87_RS04060 at 852.509 kb on + strand, within ABZR87_RS04060 at 852.509 kb on + strand, within ABZR87_RS04060 at 852.509 kb on + strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.510 kb on - strand, within ABZR87_RS04060 at 852.756 kb on + strand, within ABZR87_RS04060 at 852.757 kb on - strand, within ABZR87_RS04060 at 852.924 kb on + strand, within ABZR87_RS04060 at 852.924 kb on + strand, within ABZR87_RS04060 at 852.925 kb on - strand, within ABZR87_RS04060 at 852.925 kb on - strand, within ABZR87_RS04060 at 852.925 kb on - strand, within ABZR87_RS04060 at 853.693 kb on + strand at 853.694 kb on - strand at 853.694 kb on - strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.764 kb on + strand at 853.765 kb on - strand at 853.765 kb on - strand at 853.765 kb on - strand at 854.257 kb on - strand at 854.257 kb on - strand at 854.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 850,359 + ABZR87_RS04055 0.68 +0.9 850,359 + ABZR87_RS04055 0.68 +1.1 850,359 + ABZR87_RS04055 0.68 +0.9 850,359 + ABZR87_RS04055 0.68 -0.7 850,359 + ABZR87_RS04055 0.68 +0.1 850,360 - ABZR87_RS04055 0.68 +0.2 850,428 + ABZR87_RS04055 0.74 +1.1 850,429 - ABZR87_RS04055 0.74 +0.3 850,429 - ABZR87_RS04055 0.74 +0.3 850,475 + ABZR87_RS04055 0.78 +0.2 850,476 - ABZR87_RS04055 0.78 +0.6 850,664 - +0.3 850,734 + +2.6 850,734 + -0.1 850,734 + +0.7 850,734 + -0.3 850,734 + +1.9 850,734 + -0.5 850,734 + +1.3 850,735 - +0.6 850,735 - -0.5 850,756 - -0.1 850,756 - +0.7 850,756 - -0.0 850,756 - +0.6 850,756 - -0.2 850,756 - -0.6 850,890 + +1.1 850,890 + +4.4 850,890 + +0.9 850,890 + -0.3 850,891 - -0.6 850,891 - +0.3 850,891 - -0.1 850,929 + +0.8 851,065 + +0.5 851,065 + +0.6 851,066 - -0.3 851,204 + -0.1 851,204 + -0.4 851,204 + -0.6 851,204 + +0.7 851,205 - -2.7 851,205 - -0.1 851,205 - -1.9 851,205 - +0.3 851,205 - -1.7 851,240 + -1.5 851,274 - +0.4 851,355 + -0.4 851,356 - -1.2 851,371 - -0.8 851,446 - -1.4 851,632 + ABZR87_RS04060 0.14 -0.0 851,632 + ABZR87_RS04060 0.14 -0.0 851,633 - ABZR87_RS04060 0.14 -1.0 851,633 - ABZR87_RS04060 0.14 -0.7 851,673 + ABZR87_RS04060 0.16 -0.7 851,674 - ABZR87_RS04060 0.16 -1.5 851,751 - ABZR87_RS04060 0.19 -1.4 851,819 + ABZR87_RS04060 0.22 -0.5 851,819 + ABZR87_RS04060 0.22 +0.5 851,820 - ABZR87_RS04060 0.22 -0.2 851,820 - ABZR87_RS04060 0.22 -1.0 851,982 - ABZR87_RS04060 0.29 +0.4 851,982 - ABZR87_RS04060 0.29 -1.6 852,183 - ABZR87_RS04060 0.37 +1.1 852,183 - ABZR87_RS04060 0.37 -0.3 852,183 - ABZR87_RS04060 0.37 -0.5 852,197 + ABZR87_RS04060 0.38 +0.7 852,197 + ABZR87_RS04060 0.38 +0.2 852,198 - ABZR87_RS04060 0.38 +0.5 852,198 - ABZR87_RS04060 0.38 +0.5 852,251 + ABZR87_RS04060 0.40 +0.6 852,251 + ABZR87_RS04060 0.40 -0.3 852,251 + ABZR87_RS04060 0.40 +0.0 852,251 + ABZR87_RS04060 0.40 -1.4 852,251 + ABZR87_RS04060 0.40 -1.1 852,251 + ABZR87_RS04060 0.40 -1.0 852,251 + ABZR87_RS04060 0.40 +0.7 852,251 + ABZR87_RS04060 0.40 +0.3 852,252 - ABZR87_RS04060 0.40 -0.1 852,252 - ABZR87_RS04060 0.40 +1.9 852,252 - ABZR87_RS04060 0.40 +0.4 852,252 - ABZR87_RS04060 0.40 +0.1 852,252 - ABZR87_RS04060 0.40 -0.1 852,252 - ABZR87_RS04060 0.40 -0.3 852,252 - ABZR87_RS04060 0.40 -0.7 852,252 - ABZR87_RS04060 0.40 -1.2 852,371 + ABZR87_RS04060 0.45 +0.2 852,371 + ABZR87_RS04060 0.45 -1.1 852,383 + ABZR87_RS04060 0.46 +0.2 852,383 + ABZR87_RS04060 0.46 -0.5 852,383 + ABZR87_RS04060 0.46 -0.0 852,383 + ABZR87_RS04060 0.46 +0.4 852,384 - ABZR87_RS04060 0.46 -0.8 852,384 - ABZR87_RS04060 0.46 +0.0 852,384 - ABZR87_RS04060 0.46 -0.5 852,384 - ABZR87_RS04060 0.46 -0.0 852,384 - ABZR87_RS04060 0.46 -2.5 852,401 + ABZR87_RS04060 0.47 -2.1 852,401 + ABZR87_RS04060 0.47 -0.7 852,402 - ABZR87_RS04060 0.47 -1.6 852,402 - ABZR87_RS04060 0.47 -0.1 852,402 - ABZR87_RS04060 0.47 +0.3 852,405 + ABZR87_RS04060 0.47 +0.8 852,405 + ABZR87_RS04060 0.47 +0.3 852,406 - ABZR87_RS04060 0.47 -0.1 852,406 - ABZR87_RS04060 0.47 -0.6 852,406 - ABZR87_RS04060 0.47 +0.5 852,406 - ABZR87_RS04060 0.47 -0.6 852,406 - ABZR87_RS04060 0.47 -0.6 852,509 + ABZR87_RS04060 0.51 +0.9 852,509 + ABZR87_RS04060 0.51 -0.4 852,509 + ABZR87_RS04060 0.51 -0.1 852,509 + ABZR87_RS04060 0.51 -1.9 852,509 + ABZR87_RS04060 0.51 -0.5 852,510 - ABZR87_RS04060 0.51 +0.3 852,510 - ABZR87_RS04060 0.51 +0.1 852,510 - ABZR87_RS04060 0.51 +0.1 852,510 - ABZR87_RS04060 0.51 +0.6 852,510 - ABZR87_RS04060 0.51 +0.5 852,510 - ABZR87_RS04060 0.51 -1.1 852,510 - ABZR87_RS04060 0.51 -0.7 852,510 - ABZR87_RS04060 0.51 -1.7 852,756 + ABZR87_RS04060 0.62 +0.2 852,757 - ABZR87_RS04060 0.62 -0.6 852,924 + ABZR87_RS04060 0.69 +0.5 852,924 + ABZR87_RS04060 0.69 -1.5 852,925 - ABZR87_RS04060 0.69 +0.4 852,925 - ABZR87_RS04060 0.69 +0.4 852,925 - ABZR87_RS04060 0.69 -0.5 853,693 + +0.1 853,694 - +0.5 853,694 - +0.9 853,764 + -0.7 853,764 + -0.6 853,764 + -2.7 853,764 + -1.1 853,764 + -1.8 853,764 + +0.9 853,764 + -2.8 853,765 - -2.7 853,765 - +0.3 853,765 - -2.0 854,257 - -0.8 854,257 - -0.1 854,282 - -1.9
Or see this region's nucleotide sequence