Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04045 and ABZR87_RS04050 are separated by 115 nucleotides ABZR87_RS04050 and ABZR87_RS04055 are separated by 20 nucleotides ABZR87_RS04055 and ABZR87_RS04060 are separated by 567 nucleotides
ABZR87_RS04045: ABZR87_RS04045 - alpha/beta hydrolase, at 848,036 to 848,983
_RS04045
ABZR87_RS04050: ABZR87_RS04050 - CoA-binding protein, at 849,099 to 849,560
_RS04050
ABZR87_RS04055: ABZR87_RS04055 - RsiV family protein, at 849,581 to 850,723
_RS04055
ABZR87_RS04060: ABZR87_RS04060 - DUF6600 domain-containing protein, at 851,291 to 853,672
_RS04060
Position (kb) 849
850
851 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 848.665 kb on + strand, within ABZR87_RS04045 at 848.666 kb on - strand, within ABZR87_RS04045 at 848.952 kb on + strand at 848.952 kb on + strand at 848.952 kb on + strand at 848.953 kb on - strand at 848.953 kb on - strand at 848.953 kb on - strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.989 kb on - strand at 848.989 kb on - strand at 848.989 kb on - strand at 848.989 kb on - strand at 849.016 kb on + strand at 849.016 kb on + strand at 849.017 kb on - strand at 849.046 kb on + strand at 849.047 kb on - strand at 849.047 kb on - strand at 849.100 kb on + strand at 849.100 kb on + strand at 849.100 kb on + strand at 849.293 kb on + strand, within ABZR87_RS04050 at 849.358 kb on + strand, within ABZR87_RS04050 at 849.358 kb on + strand, within ABZR87_RS04050 at 849.358 kb on + strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.359 kb on - strand, within ABZR87_RS04050 at 849.436 kb on + strand, within ABZR87_RS04050 at 849.436 kb on + strand, within ABZR87_RS04050 at 849.437 kb on - strand, within ABZR87_RS04050 at 849.451 kb on + strand, within ABZR87_RS04050 at 849.451 kb on + strand, within ABZR87_RS04050 at 849.451 kb on + strand, within ABZR87_RS04050 at 849.451 kb on + strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.452 kb on - strand, within ABZR87_RS04050 at 849.541 kb on + strand at 849.541 kb on + strand at 849.541 kb on + strand at 849.541 kb on + strand at 849.541 kb on + strand at 849.542 kb on - strand at 849.654 kb on + strand at 849.654 kb on + strand at 849.655 kb on - strand at 849.669 kb on + strand at 849.669 kb on + strand at 849.669 kb on + strand at 849.669 kb on + strand at 849.670 kb on - strand at 849.709 kb on + strand, within ABZR87_RS04055 at 849.727 kb on + strand, within ABZR87_RS04055 at 849.805 kb on + strand, within ABZR87_RS04055 at 849.805 kb on + strand, within ABZR87_RS04055 at 849.805 kb on + strand, within ABZR87_RS04055 at 849.805 kb on + strand, within ABZR87_RS04055 at 849.806 kb on - strand, within ABZR87_RS04055 at 849.806 kb on - strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.909 kb on + strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.910 kb on - strand, within ABZR87_RS04055 at 849.933 kb on + strand, within ABZR87_RS04055 at 849.933 kb on + strand, within ABZR87_RS04055 at 849.933 kb on + strand, within ABZR87_RS04055 at 849.933 kb on + strand, within ABZR87_RS04055 at 849.934 kb on - strand, within ABZR87_RS04055 at 850.128 kb on + strand, within ABZR87_RS04055 at 850.129 kb on - strand, within ABZR87_RS04055 at 850.129 kb on - strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.359 kb on + strand, within ABZR87_RS04055 at 850.360 kb on - strand, within ABZR87_RS04055 at 850.428 kb on + strand, within ABZR87_RS04055 at 850.429 kb on - strand, within ABZR87_RS04055 at 850.429 kb on - strand, within ABZR87_RS04055 at 850.475 kb on + strand, within ABZR87_RS04055 at 850.476 kb on - strand, within ABZR87_RS04055 at 850.664 kb on - strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.734 kb on + strand at 850.735 kb on - strand at 850.735 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.756 kb on - strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.890 kb on + strand at 850.891 kb on - strand at 850.891 kb on - strand at 850.891 kb on - strand at 850.929 kb on + strand at 851.065 kb on + strand at 851.065 kb on + strand at 851.066 kb on - strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.204 kb on + strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.205 kb on - strand at 851.240 kb on + strand at 851.274 kb on - strand at 851.355 kb on + strand at 851.356 kb on - strand at 851.371 kb on - strand at 851.446 kb on - strand at 851.632 kb on + strand, within ABZR87_RS04060 at 851.632 kb on + strand, within ABZR87_RS04060 at 851.633 kb on - strand, within ABZR87_RS04060 at 851.633 kb on - strand, within ABZR87_RS04060 at 851.673 kb on + strand, within ABZR87_RS04060 at 851.674 kb on - strand, within ABZR87_RS04060
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 848,665 + ABZR87_RS04045 0.66 -0.5 848,666 - ABZR87_RS04045 0.66 +0.5 848,952 + +0.5 848,952 + +0.5 848,952 + +0.1 848,953 - -0.3 848,953 - -0.0 848,953 - +0.7 848,988 + +0.9 848,988 + -0.3 848,988 + +0.4 848,988 + -0.9 848,988 + -0.5 848,989 - +0.9 848,989 - +0.6 848,989 - -1.3 848,989 - +1.0 849,016 + -0.3 849,016 + +0.8 849,017 - -2.0 849,046 + +1.2 849,047 - +0.3 849,047 - +0.5 849,100 + -0.3 849,100 + +2.9 849,100 + -1.7 849,293 + ABZR87_RS04050 0.42 +1.5 849,358 + ABZR87_RS04050 0.56 +0.7 849,358 + ABZR87_RS04050 0.56 -0.5 849,358 + ABZR87_RS04050 0.56 -0.1 849,359 - ABZR87_RS04050 0.56 +0.1 849,359 - ABZR87_RS04050 0.56 -0.2 849,359 - ABZR87_RS04050 0.56 -0.1 849,359 - ABZR87_RS04050 0.56 -0.5 849,359 - ABZR87_RS04050 0.56 +0.3 849,359 - ABZR87_RS04050 0.56 -0.9 849,359 - ABZR87_RS04050 0.56 +0.9 849,436 + ABZR87_RS04050 0.73 +0.1 849,436 + ABZR87_RS04050 0.73 -1.1 849,437 - ABZR87_RS04050 0.73 -0.9 849,451 + ABZR87_RS04050 0.76 +0.9 849,451 + ABZR87_RS04050 0.76 +0.3 849,451 + ABZR87_RS04050 0.76 -0.6 849,451 + ABZR87_RS04050 0.76 +0.1 849,452 - ABZR87_RS04050 0.76 -0.4 849,452 - ABZR87_RS04050 0.76 -0.1 849,452 - ABZR87_RS04050 0.76 -1.5 849,452 - ABZR87_RS04050 0.76 -0.1 849,452 - ABZR87_RS04050 0.76 -0.9 849,452 - ABZR87_RS04050 0.76 +0.9 849,452 - ABZR87_RS04050 0.76 +0.9 849,541 + +0.5 849,541 + -0.6 849,541 + -1.0 849,541 + +1.2 849,541 + +1.4 849,542 - -0.5 849,654 + +0.9 849,654 + -1.5 849,655 - +1.0 849,669 + +0.3 849,669 + -0.6 849,669 + +1.1 849,669 + +0.4 849,670 - +1.1 849,709 + ABZR87_RS04055 0.11 +0.1 849,727 + ABZR87_RS04055 0.13 +0.6 849,805 + ABZR87_RS04055 0.20 -0.3 849,805 + ABZR87_RS04055 0.20 +0.9 849,805 + ABZR87_RS04055 0.20 +1.0 849,805 + ABZR87_RS04055 0.20 +0.8 849,806 - ABZR87_RS04055 0.20 +1.0 849,806 - ABZR87_RS04055 0.20 +0.7 849,909 + ABZR87_RS04055 0.29 +0.2 849,909 + ABZR87_RS04055 0.29 +0.5 849,909 + ABZR87_RS04055 0.29 +0.9 849,909 + ABZR87_RS04055 0.29 +0.9 849,909 + ABZR87_RS04055 0.29 +1.3 849,909 + ABZR87_RS04055 0.29 +2.3 849,909 + ABZR87_RS04055 0.29 +1.8 849,909 + ABZR87_RS04055 0.29 +0.5 849,909 + ABZR87_RS04055 0.29 +3.4 849,910 - ABZR87_RS04055 0.29 +0.5 849,910 - ABZR87_RS04055 0.29 -0.5 849,910 - ABZR87_RS04055 0.29 +0.4 849,910 - ABZR87_RS04055 0.29 +1.2 849,910 - ABZR87_RS04055 0.29 +1.4 849,910 - ABZR87_RS04055 0.29 +0.9 849,933 + ABZR87_RS04055 0.31 +1.5 849,933 + ABZR87_RS04055 0.31 -0.1 849,933 + ABZR87_RS04055 0.31 +1.4 849,933 + ABZR87_RS04055 0.31 +0.3 849,934 - ABZR87_RS04055 0.31 +0.7 850,128 + ABZR87_RS04055 0.48 +0.2 850,129 - ABZR87_RS04055 0.48 +1.4 850,129 - ABZR87_RS04055 0.48 +0.2 850,359 + ABZR87_RS04055 0.68 +0.9 850,359 + ABZR87_RS04055 0.68 +1.1 850,359 + ABZR87_RS04055 0.68 +0.9 850,359 + ABZR87_RS04055 0.68 -0.7 850,359 + ABZR87_RS04055 0.68 +0.1 850,360 - ABZR87_RS04055 0.68 +0.2 850,428 + ABZR87_RS04055 0.74 +1.1 850,429 - ABZR87_RS04055 0.74 +0.3 850,429 - ABZR87_RS04055 0.74 +0.3 850,475 + ABZR87_RS04055 0.78 +0.2 850,476 - ABZR87_RS04055 0.78 +0.6 850,664 - +0.3 850,734 + +2.6 850,734 + -0.1 850,734 + +0.7 850,734 + -0.3 850,734 + +1.9 850,734 + -0.5 850,734 + +1.3 850,735 - +0.6 850,735 - -0.5 850,756 - -0.1 850,756 - +0.7 850,756 - -0.0 850,756 - +0.6 850,756 - -0.2 850,756 - -0.6 850,890 + +1.1 850,890 + +4.4 850,890 + +0.9 850,890 + -0.3 850,891 - -0.6 850,891 - +0.3 850,891 - -0.1 850,929 + +0.8 851,065 + +0.5 851,065 + +0.6 851,066 - -0.3 851,204 + -0.1 851,204 + -0.4 851,204 + -0.6 851,204 + +0.7 851,205 - -2.7 851,205 - -0.1 851,205 - -1.9 851,205 - +0.3 851,205 - -1.7 851,240 + -1.5 851,274 - +0.4 851,355 + -0.4 851,356 - -1.2 851,371 - -0.8 851,446 - -1.4 851,632 + ABZR87_RS04060 0.14 -0.0 851,632 + ABZR87_RS04060 0.14 -0.0 851,633 - ABZR87_RS04060 0.14 -1.0 851,633 - ABZR87_RS04060 0.14 -0.7 851,673 + ABZR87_RS04060 0.16 -0.7 851,674 - ABZR87_RS04060 0.16 -1.5
Or see this region's nucleotide sequence