Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11390 and ABZR87_RS11395 are separated by 466 nucleotides ABZR87_RS11395 and ABZR87_RS11400 are separated by 94 nucleotides
ABZR87_RS11390: ABZR87_RS11390 - PhoH family protein, at 2,413,697 to 2,415,424
_RS11390
ABZR87_RS11395: ABZR87_RS11395 - peroxiredoxin, at 2,415,891 to 2,416,355
_RS11395
ABZR87_RS11400: ABZR87_RS11400 - 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase, at 2,416,450 to 2,417,343
_RS11400
Position (kb)
2415
2416
2417 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2415.010 kb on - strand, within ABZR87_RS11390 at 2415.152 kb on + strand, within ABZR87_RS11390 at 2415.152 kb on + strand, within ABZR87_RS11390 at 2415.153 kb on - strand, within ABZR87_RS11390 at 2415.153 kb on - strand, within ABZR87_RS11390 at 2415.262 kb on + strand at 2415.263 kb on - strand at 2415.433 kb on + strand at 2415.434 kb on - strand at 2415.434 kb on - strand at 2415.434 kb on - strand at 2415.434 kb on - strand at 2415.434 kb on - strand at 2415.725 kb on + strand at 2415.725 kb on + strand at 2415.744 kb on + strand at 2415.882 kb on + strand at 2415.892 kb on + strand at 2415.893 kb on - strand at 2415.893 kb on - strand at 2415.894 kb on + strand at 2415.894 kb on + strand at 2415.894 kb on + strand at 2415.895 kb on - strand at 2415.895 kb on - strand at 2416.024 kb on + strand, within ABZR87_RS11395 at 2416.024 kb on + strand, within ABZR87_RS11395 at 2416.025 kb on - strand, within ABZR87_RS11395 at 2416.025 kb on - strand, within ABZR87_RS11395 at 2416.025 kb on - strand, within ABZR87_RS11395 at 2416.025 kb on - strand, within ABZR87_RS11395 at 2416.189 kb on + strand, within ABZR87_RS11395 at 2416.190 kb on - strand, within ABZR87_RS11395 at 2416.190 kb on - strand, within ABZR87_RS11395 at 2416.247 kb on - strand, within ABZR87_RS11395 at 2416.249 kb on - strand, within ABZR87_RS11395 at 2416.252 kb on + strand, within ABZR87_RS11395 at 2416.252 kb on + strand, within ABZR87_RS11395 at 2416.252 kb on + strand, within ABZR87_RS11395 at 2416.253 kb on - strand, within ABZR87_RS11395 at 2416.253 kb on - strand, within ABZR87_RS11395 at 2416.253 kb on - strand, within ABZR87_RS11395 at 2416.253 kb on - strand, within ABZR87_RS11395 at 2416.253 kb on - strand, within ABZR87_RS11395
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 2,415,010 - ABZR87_RS11390 0.76 -1.6 2,415,152 + ABZR87_RS11390 0.84 -0.7 2,415,152 + ABZR87_RS11390 0.84 -3.5 2,415,153 - ABZR87_RS11390 0.84 -1.5 2,415,153 - ABZR87_RS11390 0.84 -2.9 2,415,262 + -3.4 2,415,263 - -1.3 2,415,433 + -2.4 2,415,434 - -2.9 2,415,434 - -1.5 2,415,434 - -0.5 2,415,434 - -1.2 2,415,434 - -0.9 2,415,725 + +0.3 2,415,725 + -1.7 2,415,744 + +1.7 2,415,882 + +0.5 2,415,892 + -0.0 2,415,893 - +0.1 2,415,893 - +0.2 2,415,894 + -0.1 2,415,894 + +0.5 2,415,894 + -0.0 2,415,895 - +0.7 2,415,895 - -1.1 2,416,024 + ABZR87_RS11395 0.29 -0.6 2,416,024 + ABZR87_RS11395 0.29 +0.4 2,416,025 - ABZR87_RS11395 0.29 +1.2 2,416,025 - ABZR87_RS11395 0.29 +0.8 2,416,025 - ABZR87_RS11395 0.29 +0.4 2,416,025 - ABZR87_RS11395 0.29 +0.1 2,416,189 + ABZR87_RS11395 0.64 -0.2 2,416,190 - ABZR87_RS11395 0.64 +0.3 2,416,190 - ABZR87_RS11395 0.64 +1.2 2,416,247 - ABZR87_RS11395 0.77 +0.7 2,416,249 - ABZR87_RS11395 0.77 -0.4 2,416,252 + ABZR87_RS11395 0.78 +0.5 2,416,252 + ABZR87_RS11395 0.78 +0.8 2,416,252 + ABZR87_RS11395 0.78 +0.1 2,416,253 - ABZR87_RS11395 0.78 -1.7 2,416,253 - ABZR87_RS11395 0.78 -1.8 2,416,253 - ABZR87_RS11395 0.78 -0.2 2,416,253 - ABZR87_RS11395 0.78 +0.1 2,416,253 - ABZR87_RS11395 0.78 +0.0
Or see this region's nucleotide sequence