Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09200

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
1,945,466	-				-0.6
1,945,553	+		ABZR87_RS09195	0.19	+2.4
1,945,554	-		ABZR87_RS09195	0.19	-0.3
1,945,554	-		ABZR87_RS09195	0.19	-0.3
1,945,571	+		ABZR87_RS09195	0.21	-0.5
1,945,571	+		ABZR87_RS09195	0.21	-0.3
1,945,572	-		ABZR87_RS09195	0.21	-0.1
1,945,572	-		ABZR87_RS09195	0.21	-0.3
1,945,572	-		ABZR87_RS09195	0.21	+0.1
1,945,572	-		ABZR87_RS09195	0.21	+0.2
1,945,572	-		ABZR87_RS09195	0.21	+0.3
1,945,656	+		ABZR87_RS09195	0.31	+1.0
1,945,657	-		ABZR87_RS09195	0.31	+0.3
1,945,700	+		ABZR87_RS09195	0.36	+0.5
1,945,700	+		ABZR87_RS09195	0.36	+0.9
1,945,700	+		ABZR87_RS09195	0.36	+0.4
1,945,700	+		ABZR87_RS09195	0.36	+0.7
1,945,701	-		ABZR87_RS09195	0.36	-0.5
1,945,780	+		ABZR87_RS09195	0.46	+0.3
1,945,780	+		ABZR87_RS09195	0.46	+1.0
1,945,780	+		ABZR87_RS09195	0.46	+3.2
1,945,781	-		ABZR87_RS09195	0.46	-0.1
1,945,781	-		ABZR87_RS09195	0.46	-1.0
1,945,781	-		ABZR87_RS09195	0.46	+1.3
1,945,781	-		ABZR87_RS09195	0.46	+0.2
1,945,781	-		ABZR87_RS09195	0.46	+1.4
1,946,012	+		ABZR87_RS09195	0.73	-0.3
1,946,012	+		ABZR87_RS09195	0.73	+0.6
1,946,012	+		ABZR87_RS09195	0.73	+1.5
1,946,012	+		ABZR87_RS09195	0.73	+1.4
1,946,012	+		ABZR87_RS09195	0.73	+1.3
1,946,012	+		ABZR87_RS09195	0.73	+1.3
1,946,013	-		ABZR87_RS09195	0.73	+0.3
1,946,013	-		ABZR87_RS09195	0.73	+0.6
1,946,013	-		ABZR87_RS09195	0.73	+2.1
1,946,096	+		ABZR87_RS09195	0.83	+1.9
1,946,096	+		ABZR87_RS09195	0.83	+1.8
1,946,096	+		ABZR87_RS09195	0.83	+0.8
1,946,276	+				+0.9
1,946,277	-				+1.1
1,946,277	-				+0.4
1,946,277	-				+0.6
1,946,277	-				-0.6
1,946,292	-				+0.8
1,946,292	-				+0.3
1,946,292	-				-0.2
1,946,303	+				+0.8
1,946,303	+				+1.3
1,946,303	+				+1.5
1,946,303	+				+1.4
1,946,303	+				+1.3
1,946,303	+				+1.7
1,946,303	+				+1.4
1,946,303	+				+1.7
1,946,361	+				-0.6
1,946,362	-				-1.4
1,946,366	+				+0.9
1,946,366	+				+1.0
1,946,366	+				+1.9
1,946,366	+				-0.1
1,946,366	+				+1.8
1,946,366	+				+1.0
1,946,366	+				+0.9
1,946,366	+				-1.1
1,946,366	+				+1.1
1,946,366	+				+0.7
1,946,366	+				+0.8
1,946,366	+				+0.3
1,946,366	+				+0.8
1,946,366	+				+0.2
1,946,366	+				+0.9
1,946,366	+				+1.5
1,946,366	+				+0.9
1,946,366	+				+0.3
1,946,366	+				+0.7
1,946,367	-				-2.4
1,946,367	-				-1.2
1,946,367	-				-1.1
1,946,367	-				-1.2
1,946,367	-				-0.5
1,946,367	-				-1.1
1,946,367	-				-1.1
1,946,367	-				-2.1
1,946,367	-				+0.2
1,946,367	-				-1.0
1,946,367	-				-1.1
1,946,524	+				-2.4
1,946,524	+				-1.1
1,946,524	+				-2.1
1,946,525	-				-1.3
1,946,578	+				-1.0
1,946,578	+				-1.7
1,946,578	+				-3.1
1,946,579	-				-2.7
1,946,683	+		ABZR87_RS09200	0.14	-2.6
1,946,683	+		ABZR87_RS09200	0.14	-0.5
1,946,683	+		ABZR87_RS09200	0.14	-0.1
1,946,683	+		ABZR87_RS09200	0.14	+0.9
1,946,683	+		ABZR87_RS09200	0.14	-1.6
1,946,683	+		ABZR87_RS09200	0.14	-0.1
1,946,683	+		ABZR87_RS09200	0.14	-1.0
1,946,684	-		ABZR87_RS09200	0.14	-2.1
1,946,684	-		ABZR87_RS09200	0.14	-1.1
1,946,684	-		ABZR87_RS09200	0.14	-1.4
1,946,684	-		ABZR87_RS09200	0.14	-0.7
1,946,684	-		ABZR87_RS09200	0.14	-1.1
1,946,684	-		ABZR87_RS09200	0.14	-0.7
1,946,684	-		ABZR87_RS09200	0.14	-2.1
1,946,684	-		ABZR87_RS09200	0.14	+0.2
1,946,684	-		ABZR87_RS09200	0.14	-2.8
1,946,684	-		ABZR87_RS09200	0.14	-2.6
1,946,684	-		ABZR87_RS09200	0.14	-1.7
1,946,684	-		ABZR87_RS09200	0.14	-1.3
1,946,716	+		ABZR87_RS09200	0.16	-2.1
1,946,716	+		ABZR87_RS09200	0.16	-1.7
1,946,719	+		ABZR87_RS09200	0.16	-1.2
1,946,719	+		ABZR87_RS09200	0.16	-2.1
1,946,720	-		ABZR87_RS09200	0.16	+0.9
1,946,720	-		ABZR87_RS09200	0.16	-0.8
1,946,791	+		ABZR87_RS09200	0.20	-1.6
1,946,791	+		ABZR87_RS09200	0.20	-2.9
1,946,791	+		ABZR87_RS09200	0.20	-1.9
1,946,792	-		ABZR87_RS09200	0.20	-0.8
1,946,792	-		ABZR87_RS09200	0.20	-0.7
1,946,912	-		ABZR87_RS09200	0.27	-1.3
1,946,912	-		ABZR87_RS09200	0.27	-3.0
1,946,935	+		ABZR87_RS09200	0.28	-1.7
1,946,935	+		ABZR87_RS09200	0.28	+0.3
1,946,935	+		ABZR87_RS09200	0.28	-3.0
1,946,935	+		ABZR87_RS09200	0.28	-2.7
1,946,935	+		ABZR87_RS09200	0.28	+0.9
1,946,935	+		ABZR87_RS09200	0.28	-2.0
1,946,935	+		ABZR87_RS09200	0.28	-1.2
1,946,935	+		ABZR87_RS09200	0.28	-2.1
1,946,935	+		ABZR87_RS09200	0.28	-1.8
1,946,935	+		ABZR87_RS09200	0.28	-1.6
1,946,935	+		ABZR87_RS09200	0.28	-1.7
1,946,936	-		ABZR87_RS09200	0.29	-1.7
1,946,936	-		ABZR87_RS09200	0.29	-3.0
1,946,936	-		ABZR87_RS09200	0.29	-0.3
1,946,936	-		ABZR87_RS09200	0.29	-2.0
1,946,936	-		ABZR87_RS09200	0.29	-3.1
1,946,937	-		ABZR87_RS09200	0.29	-1.8
1,946,938	-		ABZR87_RS09200	0.29	-0.7
1,947,082	+		ABZR87_RS09200	0.37	-2.0
1,947,082	+		ABZR87_RS09200	0.37	-0.3
1,947,083	-		ABZR87_RS09200	0.37	-1.3
1,947,083	-		ABZR87_RS09200	0.37	-3.1
1,947,083	-		ABZR87_RS09200	0.37	-1.1
1,947,083	-		ABZR87_RS09200	0.37	-1.7
1,947,083	-		ABZR87_RS09200	0.37	+0.2
1,947,083	-		ABZR87_RS09200	0.37	-2.1
1,947,083	-		ABZR87_RS09200	0.37	-1.3
1,947,083	-		ABZR87_RS09200	0.37	-1.1
1,947,235	+		ABZR87_RS09200	0.46	-1.5
1,947,235	+		ABZR87_RS09200	0.46	-3.5
1,947,236	-		ABZR87_RS09200	0.46	-0.7
1,947,256	+		ABZR87_RS09200	0.47	-1.8
1,947,256	+		ABZR87_RS09200	0.47	-1.9
1,947,256	+		ABZR87_RS09200	0.47	-1.9
1,947,256	+		ABZR87_RS09200	0.47	+0.0
1,947,256	+		ABZR87_RS09200	0.47	-2.6
1,947,256	+		ABZR87_RS09200	0.47	-1.7
1,947,257	-		ABZR87_RS09200	0.47	-1.7
1,947,257	-		ABZR87_RS09200	0.47	-2.8
1,947,257	-		ABZR87_RS09200	0.47	-0.7
1,947,257	-		ABZR87_RS09200	0.47	-0.7
1,947,325	+		ABZR87_RS09200	0.51	-0.8
1,947,325	+		ABZR87_RS09200	0.51	-1.4
1,947,325	+		ABZR87_RS09200	0.51	-2.4
1,947,326	-		ABZR87_RS09200	0.51	-1.0
1,947,418	+		ABZR87_RS09200	0.57	-3.8
1,947,418	+		ABZR87_RS09200	0.57	-1.6
1,947,419	-		ABZR87_RS09200	0.57	-1.0
1,947,419	-		ABZR87_RS09200	0.57	-1.8
1,947,490	+		ABZR87_RS09200	0.61	-1.7
1,947,491	-		ABZR87_RS09200	0.61	-3.7
1,947,491	-		ABZR87_RS09200	0.61	-0.9
1,947,502	+		ABZR87_RS09200	0.62	-1.5
1,947,686	-		ABZR87_RS09200	0.72	-1.4
1,947,784	+		ABZR87_RS09200	0.78	-2.5
1,947,784	+		ABZR87_RS09200	0.78	-1.6
1,947,784	+		ABZR87_RS09200	0.78	-3.7
1,947,784	+		ABZR87_RS09200	0.78	-2.5
1,947,784	+		ABZR87_RS09200	0.78	-0.8
1,947,785	-		ABZR87_RS09200	0.78	-4.0
1,947,868	+		ABZR87_RS09200	0.83	-1.9
1,947,868	+		ABZR87_RS09200	0.83	-1.1
1,947,869	-		ABZR87_RS09200	0.83	-0.9
1,947,869	-		ABZR87_RS09200	0.83	-1.3
1,947,869	-		ABZR87_RS09200	0.83	-1.3
1,947,869	-		ABZR87_RS09200	0.83	-2.5
1,947,869	-		ABZR87_RS09200	0.83	-1.0
1,947,869	-		ABZR87_RS09200	0.83	-2.7
1,947,919	+		ABZR87_RS09200	0.86	-1.4
1,947,919	+		ABZR87_RS09200	0.86	-1.4
1,948,024	+				-3.2
1,948,024	+				-0.1
1,948,024	+				-2.6
1,948,024	+				-0.7
1,948,024	+				-1.2
1,948,024	+				-3.7
1,948,024	+				-0.3
1,948,024	+				-1.0
1,948,025	-				-2.0
1,948,025	-				-0.8
1,948,025	-				-0.9
1,948,025	-				-0.9
1,948,025	-				-2.0
1,948,025	-				-4.2
1,948,031	-				-0.6
1,948,031	-				-2.1
1,948,153	+				-0.5
1,948,154	-				+0.5
1,948,165	+				+0.3
1,948,166	-				-0.7
1,948,337	+		ABZR87_RS09205	0.18	-1.7
1,948,337	+		ABZR87_RS09205	0.18	-0.9
1,948,337	+		ABZR87_RS09205	0.18	-0.5
1,948,337	+		ABZR87_RS09205	0.18	+0.7
1,948,338	-		ABZR87_RS09205	0.18	+1.0
1,948,338	-		ABZR87_RS09205	0.18	-0.1
1,948,452	-		ABZR87_RS09205	0.32	-1.0
1,948,452	-		ABZR87_RS09205	0.32	+0.5
1,948,650	+		ABZR87_RS09205	0.57	+0.5
1,948,650	+		ABZR87_RS09205	0.57	+0.9
1,948,651	-		ABZR87_RS09205	0.57	+0.3
1,948,651	-		ABZR87_RS09205	0.57	+0.7
1,948,651	-		ABZR87_RS09205	0.57	-0.0
1,948,651	-		ABZR87_RS09205	0.57	+0.4
1,948,827	+		ABZR87_RS09205	0.79	+0.2
1,948,827	+		ABZR87_RS09205	0.79	-0.6
1,948,827	+		ABZR87_RS09205	0.79	-0.1
1,948,827	+		ABZR87_RS09205	0.79	+1.1
1,948,828	-		ABZR87_RS09205	0.80	+0.2
1,948,828	-		ABZR87_RS09205	0.80	-1.0
1,948,828	-		ABZR87_RS09205	0.80	+0.1
1,948,828	-		ABZR87_RS09205	0.80	-0.5
1,948,828	-		ABZR87_RS09205	0.80	-1.6
1,949,013	+				+0.2
1,949,013	+				-0.3
1,949,014	-				+0.5
1,949,014	-				+0.0
1,949,014	-				+0.0
1,949,121	+		ABZR87_RS09210	0.16	+0.0
1,949,122	-		ABZR87_RS09210	0.16	-0.4