Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09070 and ABZR87_RS09075 are separated by 62 nucleotides ABZR87_RS09075 and ABZR87_RS09080 overlap by 4 nucleotides ABZR87_RS09080 and ABZR87_RS09085 are separated by 138 nucleotides ABZR87_RS09085 and ABZR87_RS09090 are separated by 279 nucleotides
ABZR87_RS09070: ABZR87_RS09070 - hypothetical protein, at 1,921,702 to 1,922,067
_RS09070
ABZR87_RS09075: ABZR87_RS09075 - DUF3318 domain-containing protein, at 1,922,130 to 1,922,666
_RS09075
ABZR87_RS09080: ABZR87_RS09080 - phage holin family protein, at 1,922,663 to 1,923,040
_RS09080
ABZR87_RS09085: ABZR87_RS09085 - DUF883 family protein, at 1,923,179 to 1,923,505
_RS09085
ABZR87_RS09090: ABZR87_RS09090 - peroxiredoxin, at 1,923,785 to 1,924,423
_RS09090
Position (kb)
1922
1923
1924 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1921.667 kb on + strand at 1921.667 kb on + strand at 1921.668 kb on - strand at 1921.668 kb on - strand at 1921.668 kb on - strand at 1921.678 kb on + strand at 1921.718 kb on + strand at 1921.718 kb on + strand at 1921.719 kb on - strand at 1921.719 kb on - strand at 1921.719 kb on - strand at 1921.806 kb on + strand, within ABZR87_RS09070 at 1921.806 kb on + strand, within ABZR87_RS09070 at 1921.807 kb on - strand, within ABZR87_RS09070 at 1921.866 kb on + strand, within ABZR87_RS09070 at 1921.866 kb on + strand, within ABZR87_RS09070 at 1921.867 kb on - strand, within ABZR87_RS09070 at 1922.314 kb on + strand, within ABZR87_RS09075 at 1922.315 kb on - strand, within ABZR87_RS09075 at 1922.315 kb on - strand, within ABZR87_RS09075 at 1922.315 kb on - strand, within ABZR87_RS09075 at 1922.495 kb on - strand, within ABZR87_RS09075 at 1922.580 kb on + strand, within ABZR87_RS09075 at 1922.581 kb on - strand, within ABZR87_RS09075 at 1922.581 kb on - strand, within ABZR87_RS09075 at 1922.782 kb on - strand, within ABZR87_RS09080 at 1922.817 kb on + strand, within ABZR87_RS09080 at 1922.817 kb on + strand, within ABZR87_RS09080 at 1922.818 kb on - strand, within ABZR87_RS09080 at 1922.818 kb on - strand, within ABZR87_RS09080 at 1922.818 kb on - strand, within ABZR87_RS09080 at 1922.821 kb on + strand, within ABZR87_RS09080 at 1922.822 kb on - strand, within ABZR87_RS09080 at 1923.180 kb on + strand at 1923.261 kb on + strand, within ABZR87_RS09085 at 1923.261 kb on + strand, within ABZR87_RS09085 at 1923.261 kb on + strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.262 kb on - strand, within ABZR87_RS09085 at 1923.434 kb on + strand, within ABZR87_RS09085 at 1923.434 kb on + strand, within ABZR87_RS09085 at 1923.434 kb on + strand, within ABZR87_RS09085 at 1923.434 kb on + strand, within ABZR87_RS09085 at 1923.435 kb on - strand, within ABZR87_RS09085 at 1923.435 kb on - strand, within ABZR87_RS09085 at 1923.435 kb on - strand, within ABZR87_RS09085 at 1923.467 kb on - strand, within ABZR87_RS09085 at 1923.528 kb on - strand at 1923.528 kb on - strand at 1923.542 kb on + strand at 1923.543 kb on - strand at 1923.543 kb on - strand at 1923.543 kb on - strand at 1923.557 kb on - strand at 1923.563 kb on + strand at 1923.564 kb on - strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.568 kb on + strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.569 kb on - strand at 1923.720 kb on + strand at 1923.751 kb on + strand at 1923.751 kb on + strand at 1923.752 kb on - strand at 1923.754 kb on - strand at 1923.772 kb on + strand at 1923.772 kb on + strand at 1923.772 kb on + strand at 1923.772 kb on + strand at 1923.772 kb on + strand at 1923.773 kb on - strand at 1923.773 kb on - strand at 1923.773 kb on - strand at 1923.792 kb on + strand at 1923.792 kb on + strand at 1923.792 kb on + strand at 1923.792 kb on + strand at 1923.793 kb on - strand at 1923.905 kb on + strand, within ABZR87_RS09090 at 1923.906 kb on - strand, within ABZR87_RS09090 at 1923.906 kb on - strand, within ABZR87_RS09090
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 1,921,667 + +0.0 1,921,667 + -1.8 1,921,668 - -1.6 1,921,668 - +0.5 1,921,668 - -2.6 1,921,678 + -0.7 1,921,718 + +0.4 1,921,718 + +0.9 1,921,719 - +1.0 1,921,719 - +0.3 1,921,719 - -0.1 1,921,806 + ABZR87_RS09070 0.28 -0.1 1,921,806 + ABZR87_RS09070 0.28 +0.9 1,921,807 - ABZR87_RS09070 0.29 +0.2 1,921,866 + ABZR87_RS09070 0.45 -0.6 1,921,866 + ABZR87_RS09070 0.45 -0.1 1,921,867 - ABZR87_RS09070 0.45 +0.0 1,922,314 + ABZR87_RS09075 0.34 -0.5 1,922,315 - ABZR87_RS09075 0.34 -1.1 1,922,315 - ABZR87_RS09075 0.34 -0.4 1,922,315 - ABZR87_RS09075 0.34 -0.2 1,922,495 - ABZR87_RS09075 0.68 -0.5 1,922,580 + ABZR87_RS09075 0.84 -0.6 1,922,581 - ABZR87_RS09075 0.84 +0.8 1,922,581 - ABZR87_RS09075 0.84 -0.9 1,922,782 - ABZR87_RS09080 0.31 -1.7 1,922,817 + ABZR87_RS09080 0.41 -1.1 1,922,817 + ABZR87_RS09080 0.41 -2.4 1,922,818 - ABZR87_RS09080 0.41 -0.7 1,922,818 - ABZR87_RS09080 0.41 -1.6 1,922,818 - ABZR87_RS09080 0.41 -2.3 1,922,821 + ABZR87_RS09080 0.42 -1.4 1,922,822 - ABZR87_RS09080 0.42 -0.7 1,923,180 + -0.0 1,923,261 + ABZR87_RS09085 0.25 -1.4 1,923,261 + ABZR87_RS09085 0.25 -2.3 1,923,261 + ABZR87_RS09085 0.25 -1.7 1,923,262 - ABZR87_RS09085 0.25 -1.7 1,923,262 - ABZR87_RS09085 0.25 +0.2 1,923,262 - ABZR87_RS09085 0.25 -1.0 1,923,262 - ABZR87_RS09085 0.25 -0.5 1,923,262 - ABZR87_RS09085 0.25 +0.8 1,923,262 - ABZR87_RS09085 0.25 -0.1 1,923,262 - ABZR87_RS09085 0.25 -1.0 1,923,262 - ABZR87_RS09085 0.25 -1.1 1,923,434 + ABZR87_RS09085 0.78 -0.7 1,923,434 + ABZR87_RS09085 0.78 -1.4 1,923,434 + ABZR87_RS09085 0.78 -0.8 1,923,434 + ABZR87_RS09085 0.78 -0.0 1,923,435 - ABZR87_RS09085 0.78 -1.8 1,923,435 - ABZR87_RS09085 0.78 -2.0 1,923,435 - ABZR87_RS09085 0.78 -1.0 1,923,467 - ABZR87_RS09085 0.88 -0.9 1,923,528 - +0.2 1,923,528 - -0.1 1,923,542 + -1.5 1,923,543 - -1.1 1,923,543 - -0.2 1,923,543 - -0.2 1,923,557 - +0.1 1,923,563 + -1.0 1,923,564 - +0.1 1,923,568 + -0.2 1,923,568 + -1.0 1,923,568 + -1.2 1,923,568 + -0.1 1,923,568 + -0.5 1,923,568 + -0.0 1,923,568 + -1.8 1,923,568 + -0.9 1,923,568 + -0.5 1,923,568 + -1.6 1,923,568 + +0.1 1,923,568 + -2.4 1,923,568 + -0.0 1,923,568 + +0.6 1,923,568 + +0.1 1,923,568 + -0.5 1,923,568 + -0.2 1,923,569 - +0.4 1,923,569 - -0.2 1,923,569 - +1.8 1,923,569 - -0.2 1,923,569 - +1.0 1,923,569 - +0.7 1,923,569 - +0.3 1,923,569 - +0.3 1,923,569 - -1.9 1,923,569 - +1.3 1,923,569 - -0.4 1,923,569 - +0.1 1,923,569 - +0.5 1,923,569 - -0.3 1,923,569 - +0.3 1,923,569 - -0.2 1,923,569 - -0.3 1,923,569 - -0.4 1,923,569 - +0.3 1,923,569 - -0.2 1,923,569 - -0.0 1,923,569 - -1.1 1,923,720 + -0.5 1,923,751 + -1.0 1,923,751 + -1.6 1,923,752 - -0.1 1,923,754 - +0.5 1,923,772 + -0.2 1,923,772 + -1.5 1,923,772 + -0.3 1,923,772 + +0.1 1,923,772 + -1.0 1,923,773 - -0.4 1,923,773 - -1.8 1,923,773 - +0.1 1,923,792 + -0.7 1,923,792 + -1.4 1,923,792 + -0.2 1,923,792 + +0.2 1,923,793 - -0.2 1,923,905 + ABZR87_RS09090 0.19 -2.1 1,923,906 - ABZR87_RS09090 0.19 +0.1 1,923,906 - ABZR87_RS09090 0.19 -1.0
Or see this region's nucleotide sequence