Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06810

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
1,443,198	-		ABZR87_RS06800	0.54	-1.6
1,443,198	-		ABZR87_RS06800	0.54	-2.3
1,443,213	-		ABZR87_RS06800	0.55	-1.8
1,443,213	-		ABZR87_RS06800	0.55	-0.8
1,443,213	-		ABZR87_RS06800	0.55	-0.9
1,443,213	-		ABZR87_RS06800	0.55	-1.6
1,443,308	+		ABZR87_RS06800	0.61	-3.1
1,443,308	+		ABZR87_RS06800	0.61	-2.0
1,443,309	-		ABZR87_RS06800	0.61	-1.6
1,443,309	-		ABZR87_RS06800	0.61	-2.6
1,443,309	-		ABZR87_RS06800	0.61	-1.4
1,443,500	+		ABZR87_RS06800	0.73	-2.7
1,443,500	+		ABZR87_RS06800	0.73	-1.6
1,443,500	+		ABZR87_RS06800	0.73	-1.6
1,443,500	+		ABZR87_RS06800	0.73	-0.9
1,443,500	+		ABZR87_RS06800	0.73	-2.2
1,443,500	+		ABZR87_RS06800	0.73	-2.8
1,443,500	+		ABZR87_RS06800	0.73	-2.7
1,443,500	+		ABZR87_RS06800	0.73	+2.2
1,443,500	+		ABZR87_RS06800	0.73	-0.2
1,443,500	+		ABZR87_RS06800	0.73	-0.7
1,443,500	+		ABZR87_RS06800	0.73	-0.3
1,443,501	-		ABZR87_RS06800	0.73	+1.2
1,443,501	-		ABZR87_RS06800	0.73	-2.1
1,443,501	-		ABZR87_RS06800	0.73	-3.7
1,443,501	-		ABZR87_RS06800	0.73	-2.2
1,443,501	-		ABZR87_RS06800	0.73	-1.8
1,443,501	-		ABZR87_RS06800	0.73	-2.5
1,443,503	+		ABZR87_RS06800	0.73	-1.6
1,443,503	+		ABZR87_RS06800	0.73	-1.3
1,443,503	+		ABZR87_RS06800	0.73	+0.5
1,443,503	+		ABZR87_RS06800	0.73	-1.8
1,443,503	+		ABZR87_RS06800	0.73	-0.9
1,443,503	+		ABZR87_RS06800	0.73	-1.6
1,443,504	-		ABZR87_RS06800	0.73	-1.4
1,443,504	-		ABZR87_RS06800	0.73	-2.1
1,443,504	-		ABZR87_RS06800	0.73	-0.8
1,443,504	-		ABZR87_RS06800	0.73	-1.8
1,443,504	-		ABZR87_RS06800	0.73	-1.7
1,443,504	-		ABZR87_RS06800	0.73	-1.2
1,443,524	+		ABZR87_RS06800	0.74	-1.7
1,443,524	+		ABZR87_RS06800	0.74	-0.6
1,443,524	+		ABZR87_RS06800	0.74	-1.8
1,443,524	+		ABZR87_RS06800	0.74	-0.4
1,443,525	-		ABZR87_RS06800	0.74	+0.0
1,443,525	-		ABZR87_RS06800	0.74	-2.3
1,443,525	-		ABZR87_RS06800	0.74	-2.1
1,443,525	-		ABZR87_RS06800	0.74	-1.9
1,443,525	-		ABZR87_RS06800	0.74	-0.8
1,443,569	+		ABZR87_RS06800	0.77	-1.0
1,443,569	+		ABZR87_RS06800	0.77	-2.0
1,443,569	+		ABZR87_RS06800	0.77	-0.8
1,443,570	-		ABZR87_RS06800	0.77	-1.9
1,443,570	-		ABZR87_RS06800	0.77	-1.1
1,443,570	-		ABZR87_RS06800	0.77	-2.9
1,443,570	-		ABZR87_RS06800	0.77	-1.4
1,443,570	-		ABZR87_RS06800	0.77	-3.0
1,443,570	-		ABZR87_RS06800	0.77	-1.2
1,443,570	-		ABZR87_RS06800	0.77	-2.7
1,443,572	+		ABZR87_RS06800	0.77	-1.5
1,443,573	-		ABZR87_RS06800	0.77	-0.7
1,443,596	+		ABZR87_RS06800	0.79	-1.5
1,443,596	+		ABZR87_RS06800	0.79	-1.9
1,443,596	+		ABZR87_RS06800	0.79	-1.0
1,443,596	+		ABZR87_RS06800	0.79	-1.1
1,443,602	+		ABZR87_RS06800	0.79	-2.2
1,443,602	+		ABZR87_RS06800	0.79	-1.8
1,443,602	+		ABZR87_RS06800	0.79	-2.6
1,443,602	+		ABZR87_RS06800	0.79	-0.2
1,443,603	-		ABZR87_RS06800	0.79	-1.1
1,443,603	-		ABZR87_RS06800	0.79	-1.8
1,443,603	-		ABZR87_RS06800	0.79	-1.8
1,443,603	-		ABZR87_RS06800	0.79	-1.5
1,443,603	-		ABZR87_RS06800	0.79	-2.1
1,443,788	+				-1.4
1,443,788	+				-2.0
1,443,788	+				-0.8
1,443,788	+				-0.3
1,443,789	-				-2.0
1,443,789	-				-2.6
1,443,819	-				-0.5
1,443,932	+				-0.4
1,443,932	+				-1.5
1,443,932	+				-0.5
1,443,933	-				-2.0
1,443,933	-				-0.9
1,443,933	-				-0.8
1,443,933	-				-0.4
1,443,933	-				-1.0
1,443,933	-				-0.7
1,443,933	-				-0.8
1,443,933	-				-1.1
1,444,167	+				-0.6
1,444,167	+				-0.6
1,444,168	-				-1.6
1,444,168	-				-2.1
1,444,306	+		ABZR87_RS06810	0.23	-1.4
1,444,307	-		ABZR87_RS06810	0.23	-2.3
1,444,475	+		ABZR87_RS06810	0.50	-2.1
1,444,475	+		ABZR87_RS06810	0.50	-0.7
1,444,475	+		ABZR87_RS06810	0.50	-2.3
1,444,475	+		ABZR87_RS06810	0.50	-1.2
1,444,475	+		ABZR87_RS06810	0.50	-1.4
1,444,475	+		ABZR87_RS06810	0.50	-2.5
1,444,475	+		ABZR87_RS06810	0.50	-2.3
1,444,476	-		ABZR87_RS06810	0.51	-2.5
1,444,476	-		ABZR87_RS06810	0.51	-2.4
1,444,476	-		ABZR87_RS06810	0.51	-2.6
1,444,476	-		ABZR87_RS06810	0.51	-2.5
1,444,476	-		ABZR87_RS06810	0.51	-0.1
1,444,504	+		ABZR87_RS06810	0.55	-1.4
1,444,530	+		ABZR87_RS06810	0.59	-0.6
1,444,531	-		ABZR87_RS06810	0.60	+1.6
1,444,711	+		ABZR87_RS06810	0.89	-1.4
1,444,712	-		ABZR87_RS06810	0.89	-2.3
1,444,712	-		ABZR87_RS06810	0.89	-1.9
1,444,712	-		ABZR87_RS06810	0.89	-1.6
1,445,109	+				-1.2
1,445,109	+				-1.3
1,445,110	-				-0.1
1,445,112	+				-0.5
1,445,112	+				-0.8
1,445,112	+				-0.8
1,445,113	-				-1.0
1,445,113	-				-2.7
1,445,113	-				-2.8
1,445,113	-				-0.7
1,445,113	-				-1.0
1,445,113	-				-2.2
1,445,304	+		ABZR87_RS06820	0.26	-1.3
1,445,304	+		ABZR87_RS06820	0.26	-1.6
1,445,304	+		ABZR87_RS06820	0.26	-1.1
1,445,304	+		ABZR87_RS06820	0.26	-3.9
1,445,305	-		ABZR87_RS06820	0.26	-2.1
1,445,305	-		ABZR87_RS06820	0.26	-2.9
1,445,305	-		ABZR87_RS06820	0.26	-0.4
1,445,400	+		ABZR87_RS06820	0.37	-1.8
1,445,400	+		ABZR87_RS06820	0.37	-1.2
1,445,400	+		ABZR87_RS06820	0.37	-3.1
1,445,400	+		ABZR87_RS06820	0.37	-0.5
1,445,400	+		ABZR87_RS06820	0.37	-3.1
1,445,401	-		ABZR87_RS06820	0.37	-1.8
1,445,401	-		ABZR87_RS06820	0.37	-0.0
1,445,691	+		ABZR87_RS06820	0.71	-1.0
1,445,691	+		ABZR87_RS06820	0.71	-1.2
1,445,691	+		ABZR87_RS06820	0.71	-2.6
1,445,691	+		ABZR87_RS06820	0.71	-1.5
1,445,691	+		ABZR87_RS06820	0.71	-3.7
1,445,691	+		ABZR87_RS06820	0.71	-0.8
1,445,692	-		ABZR87_RS06820	0.71	-2.0
1,445,703	+		ABZR87_RS06820	0.72	-1.1
1,445,739	+		ABZR87_RS06820	0.76	-2.2
1,445,739	+		ABZR87_RS06820	0.76	-2.8
1,445,740	-		ABZR87_RS06820	0.76	-1.1
1,445,740	-		ABZR87_RS06820	0.76	+1.5
1,445,740	-		ABZR87_RS06820	0.76	-0.4
1,445,740	-		ABZR87_RS06820	0.76	-1.7
1,445,740	-		ABZR87_RS06820	0.76	-2.1