Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1552

Experiment: BHIS with Zinc Pyrithione 0.025 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Zinc Pyrithione 0.025 mM
1,915,833	+		BT1551	0.65	-2.0
1,915,932	-		BT1551	0.69	+0.6
1,915,962	-		BT1551	0.70	-2.2
1,915,962	-		BT1551	0.70	-0.9
1,915,998	-		BT1551	0.72	-1.2
1,915,998	-		BT1551	0.72	-1.5
1,916,009	-		BT1551	0.72	-0.9
1,916,016	+		BT1551	0.72	-3.5
1,916,028	+		BT1551	0.73	+0.1
1,916,094	+		BT1551	0.75	-0.9
1,916,108	-		BT1551	0.76	+0.1
1,916,139	-		BT1551	0.77	-1.5
1,916,145	-		BT1551	0.77	-1.7
1,916,196	+		BT1551	0.79	+2.4
1,916,257	+		BT1551	0.82	-1.9
1,916,410	-		BT1551	0.87	-0.4
1,916,507	+				-0.8
1,916,594	-				-2.4
1,916,638	+				+0.1
1,916,639	-				+0.7
1,916,694	-				-0.3
1,916,710	-				-2.2
1,916,714	-				+1.1
1,916,756	+				-0.9
1,916,757	-				-3.1
1,916,766	+				+0.1
1,916,773	-				-2.7
1,916,780	-				-1.5
1,916,803	-				+1.7
1,916,852	-				+0.1
1,916,862	+				+0.1
1,916,866	-				-2.2
1,916,963	-				+2.4
1,916,965	+				-1.9
1,916,966	-				-0.7
1,916,966	-				-0.2
1,916,966	-				-0.3
1,916,968	+				-1.5
1,917,094	-				+0.1
1,917,112	+		BT1552	0.10	-0.6
1,917,113	-		BT1552	0.10	-0.8
1,917,113	-		BT1552	0.10	-1.4
1,917,133	-		BT1552	0.11	+0.1
1,917,200	-		BT1552	0.13	+0.9
1,917,202	+		BT1552	0.13	-1.7
1,917,207	+		BT1552	0.13	+0.1
1,917,207	+		BT1552	0.13	-0.1
1,917,207	+		BT1552	0.13	+1.0
1,917,207	+		BT1552	0.13	+0.8
1,917,308	-		BT1552	0.16	-2.5
1,917,404	-		BT1552	0.19	+0.1
1,917,482	-		BT1552	0.21	-2.9
1,917,532	+		BT1552	0.23	-0.9
1,917,593	-		BT1552	0.24	+1.4
1,917,609	-		BT1552	0.25	+0.1
1,917,638	-		BT1552	0.26	-0.1
1,917,771	-		BT1552	0.30	-1.4
1,917,777	+		BT1552	0.30	+0.1
1,917,815	-		BT1552	0.31	-0.4
1,917,815	-		BT1552	0.31	+1.1
1,917,860	-		BT1552	0.32	-0.9
1,917,874	+		BT1552	0.33	-1.9
1,917,876	+		BT1552	0.33	+0.1
1,917,876	+		BT1552	0.33	-3.2
1,917,877	-		BT1552	0.33	-0.9
1,917,877	-		BT1552	0.33	+1.4
1,917,879	+		BT1552	0.33	-0.3
1,917,905	+		BT1552	0.34	-0.7
1,917,907	+		BT1552	0.34	+1.4
1,917,907	-		BT1552	0.34	-0.2
1,917,908	-		BT1552	0.34	-0.9
1,917,950	-		BT1552	0.35	-1.2
1,918,108	+		BT1552	0.40	+0.4
1,918,109	-		BT1552	0.40	+0.1
1,918,120	+		BT1552	0.40	+0.7
1,918,134	-		BT1552	0.41	-0.3
1,918,157	+		BT1552	0.41	-1.5
1,918,177	+		BT1552	0.42	+1.1
1,918,187	+		BT1552	0.42	+1.7
1,918,216	+		BT1552	0.43	-1.5
1,918,242	-		BT1552	0.44	+2.1
1,918,243	+		BT1552	0.44	-0.1
1,918,297	+		BT1552	0.46	-0.6
1,918,391	+		BT1552	0.48	-2.5
1,918,443	-		BT1552	0.50	+0.1
1,918,462	+		BT1552	0.50	+0.2
1,918,463	-		BT1552	0.50	-0.9
1,918,464	+		BT1552	0.51	-0.1
1,918,464	+		BT1552	0.51	-2.1
1,918,466	+		BT1552	0.51	-2.9
1,918,467	-		BT1552	0.51	-1.9
1,918,467	-		BT1552	0.51	+2.1
1,918,522	+		BT1552	0.52	-0.4
1,918,544	+		BT1552	0.53	+0.1
1,918,575	+		BT1552	0.54	-1.5
1,918,959	+		BT1552	0.65	-2.2
1,919,003	-		BT1552	0.67	-0.2
1,919,014	+		BT1552	0.67	-0.9
1,919,021	-		BT1552	0.67	-2.8
1,919,059	+		BT1552	0.68	-2.2
1,919,103	-		BT1552	0.70	+0.1
1,919,103	-		BT1552	0.70	+0.1
1,919,128	-		BT1552	0.70	-0.8
1,919,132	-		BT1552	0.70	+0.1
1,919,148	+		BT1552	0.71	-2.5
1,919,148	+		BT1552	0.71	+2.9
1,919,191	+		BT1552	0.72	-0.4
1,919,299	+		BT1552	0.75	-0.1
1,919,315	+		BT1552	0.76	+0.1
1,919,316	-		BT1552	0.76	-0.7
1,919,347	+		BT1552	0.77	-1.5
1,919,383	-		BT1552	0.78	+0.1
1,919,383	-		BT1552	0.78	-2.1
1,919,403	-		BT1552	0.79	-0.5
1,919,465	+		BT1552	0.80	+0.1
1,919,587	+		BT1552	0.84	-0.5
1,919,591	+		BT1552	0.84	+1.1
1,919,645	+		BT1552	0.86	-3.7
1,919,645	+		BT1552	0.86	-0.9
1,919,678	+		BT1552	0.87	+0.1
1,919,710	+		BT1552	0.88	-0.6
1,919,711	-		BT1552	0.88	+0.1
1,919,714	+		BT1552	0.88	+2.1
1,919,722	-		BT1552	0.88	+0.1
1,919,747	-		BT1552	0.89	+0.1
1,919,747	-		BT1552	0.89	+1.7
1,919,758	+		BT1552	0.89	-1.9
1,919,759	-		BT1552	0.89	+1.1
1,919,760	+		BT1552	0.89	+0.1
1,919,760	+		BT1552	0.89	+0.1
1,919,768	-		BT1552	0.90	+1.1
1,919,898	+				-1.2
1,919,898	-				-0.9
1,919,904	-				-1.2
1,919,986	-				+0.1
1,920,035	+				+0.1
1,920,082	+				-2.5
1,920,103	-				-0.9
1,920,229	-				+1.4
1,920,243	+				-0.5
1,920,252	-				+0.6
1,920,324	+		BT1553	0.14	+1.4
1,920,324	+		BT1553	0.14	+1.1
1,920,328	+		BT1553	0.15	-2.5
1,920,329	-		BT1553	0.15	-1.5
1,920,329	-		BT1553	0.15	-1.3
1,920,388	+		BT1553	0.19	-0.8
1,920,430	-		BT1553	0.22	+1.1
1,920,431	+		BT1553	0.22	-3.1
1,920,432	-		BT1553	0.22	-1.9
1,920,434	+		BT1553	0.23	-2.5
1,920,463	-		BT1553	0.25	-1.5
1,920,463	-		BT1553	0.25	+1.7
1,920,466	-		BT1553	0.25	-2.5
1,920,478	+		BT1553	0.26	+0.1
1,920,545	+		BT1553	0.31	-1.3
1,920,545	+		BT1553	0.31	-0.2
1,920,545	+		BT1553	0.31	+0.1
1,920,565	+		BT1553	0.32	-0.8
1,920,570	+		BT1553	0.33	+0.1
1,920,584	+		BT1553	0.34	-0.3
1,920,586	+		BT1553	0.34	-3.2
1,920,586	+		BT1553	0.34	-1.9
1,920,652	-		BT1553	0.39	-0.9
1,920,681	-		BT1553	0.41	-2.2
1,920,681	-		BT1553	0.41	-0.5
1,920,681	-		BT1553	0.41	-1.4
1,920,683	-		BT1553	0.41	-2.0
1,920,683	-		BT1553	0.41	-1.5
1,920,693	+		BT1553	0.42	+1.0
1,920,702	+		BT1553	0.43	-2.4
1,920,702	+		BT1553	0.43	-1.5
1,920,749	+		BT1553	0.46	-0.5
1,920,749	+		BT1553	0.46	-2.2
1,920,830	+		BT1553	0.52	-0.3
1,920,831	-		BT1553	0.52	+2.1
1,920,831	-		BT1553	0.52	-2.6
1,920,852	+		BT1553	0.54	-1.5
1,920,852	+		BT1553	0.54	-2.8
1,920,912	-		BT1553	0.59	+0.1
1,920,932	-		BT1553	0.60	-1.5
1,920,981	+		BT1553	0.64	-1.9
1,921,009	+		BT1553	0.66	+1.1
1,921,009	+		BT1553	0.66	-0.8
1,921,009	+		BT1553	0.66	-1.9
1,921,054	+		BT1553	0.69	+0.8
1,921,055	-		BT1553	0.69	-1.6
1,921,059	-		BT1553	0.70	-1.9
1,921,091	-		BT1553	0.72	+0.1