Experiment: BHIS with Zinc Pyrithione 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0159 and BT0160 are separated by 121 nucleotides BT0160 and BT0161 are separated by 47 nucleotides BT0161 and BT0162 are separated by 19 nucleotides
BT0159: BT0159 - conserved hypothetical protein (NCBI ptt file), at 164,674 to 165,546
BT0159
BT0160: BT0160 - hypothetical protein (NCBI ptt file), at 165,668 to 166,102
BT0160
BT0161: BT0161 - putative permease (NCBI ptt file), at 166,150 to 167,325
BT0161
BT0162: BT0162 - penicillin-binding protein 1C (PBP-1c) (NCBI ptt file), at 167,345 to 169,663
BT0162
Position (kb) 166
167
168 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 165.230 kb on - strand, within BT0159 at 165.232 kb on - strand, within BT0159 at 165.252 kb on + strand, within BT0159 at 165.310 kb on + strand, within BT0159 at 165.345 kb on + strand, within BT0159 at 165.476 kb on - strand at 165.526 kb on - strand at 165.580 kb on - strand at 165.654 kb on + strand at 165.766 kb on + strand, within BT0160 at 165.766 kb on + strand, within BT0160 at 165.812 kb on - strand, within BT0160 at 165.904 kb on + strand, within BT0160 at 166.121 kb on + strand at 166.174 kb on + strand at 166.379 kb on - strand, within BT0161 at 166.508 kb on + strand, within BT0161 at 166.814 kb on + strand, within BT0161 at 166.815 kb on - strand, within BT0161 at 166.964 kb on - strand, within BT0161 at 167.147 kb on - strand, within BT0161 at 167.206 kb on + strand, within BT0161 at 167.232 kb on - strand at 167.336 kb on + strand at 167.520 kb on - strand at 167.653 kb on - strand, within BT0162 at 167.722 kb on + strand, within BT0162 at 167.775 kb on - strand, within BT0162 at 168.192 kb on - strand, within BT0162 at 168.300 kb on + strand, within BT0162 at 168.312 kb on - strand, within BT0162
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Zinc Pyrithione 0.025 mM remove 165,230 - BT0159 0.64 -2.7 165,232 - BT0159 0.64 -1.5 165,252 + BT0159 0.66 +0.1 165,310 + BT0159 0.73 +0.1 165,345 + BT0159 0.77 -1.1 165,476 - +0.1 165,526 - -0.5 165,580 - -2.0 165,654 + +1.7 165,766 + BT0160 0.23 -1.5 165,766 + BT0160 0.23 -1.9 165,812 - BT0160 0.33 -2.7 165,904 + BT0160 0.54 -1.8 166,121 + -0.9 166,174 + -0.9 166,379 - BT0161 0.19 -2.2 166,508 + BT0161 0.30 +0.1 166,814 + BT0161 0.56 +0.1 166,815 - BT0161 0.57 -2.7 166,964 - BT0161 0.69 -1.1 167,147 - BT0161 0.85 -2.8 167,206 + BT0161 0.90 -3.7 167,232 - -0.5 167,336 + -2.7 167,520 - -1.2 167,653 - BT0162 0.13 -2.2 167,722 + BT0162 0.16 -2.2 167,775 - BT0162 0.19 +1.7 168,192 - BT0162 0.37 -2.7 168,300 + BT0162 0.41 -0.6 168,312 - BT0162 0.42 +0.1
Or see this region's nucleotide sequence