Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13800

Experiment: Azelaic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Azelaic (C)
2,909,224	+		ABZR87_RS13790	0.69	-3.3
2,909,224	+		ABZR87_RS13790	0.69	-4.6
2,909,225	-		ABZR87_RS13790	0.69	-3.0
2,909,225	-		ABZR87_RS13790	0.69	-2.9
2,909,225	-		ABZR87_RS13790	0.69	-2.5
2,909,225	-		ABZR87_RS13790	0.69	-2.5
2,909,225	-		ABZR87_RS13790	0.69	-3.4
2,909,225	-		ABZR87_RS13790	0.69	-2.0
2,909,236	+		ABZR87_RS13790	0.70	-3.9
2,909,236	+		ABZR87_RS13790	0.70	-3.2
2,909,237	-		ABZR87_RS13790	0.70	-2.9
2,909,237	-		ABZR87_RS13790	0.70	-3.0
2,909,237	-		ABZR87_RS13790	0.70	-0.5
2,909,242	+		ABZR87_RS13790	0.70	-3.0
2,909,242	+		ABZR87_RS13790	0.70	-4.8
2,909,243	-		ABZR87_RS13790	0.70	-1.5
2,909,243	-		ABZR87_RS13790	0.70	-3.0
2,909,285	-		ABZR87_RS13790	0.74	-2.7
2,909,306	+		ABZR87_RS13790	0.76	+0.0
2,909,354	-		ABZR87_RS13790	0.81	-1.5
2,909,354	-		ABZR87_RS13790	0.81	-2.4
2,909,399	+		ABZR87_RS13790	0.85	-2.4
2,909,400	-		ABZR87_RS13790	0.85	-3.8
2,909,623	+				-1.3
2,909,623	+				-1.5
2,909,628	+				+0.2
2,909,628	+				-2.9
2,909,629	-				-0.5
2,909,629	-				-0.7
2,909,629	-				+0.4
2,909,629	-				-3.2
2,909,629	-				-0.7
2,909,629	-				-0.5
2,909,855	+		ABZR87_RS13795	0.49	-2.4
2,909,855	+		ABZR87_RS13795	0.49	-1.5
2,909,856	-		ABZR87_RS13795	0.49	-0.2
2,909,856	-		ABZR87_RS13795	0.49	-0.5
2,909,897	+		ABZR87_RS13795	0.59	+1.1
2,910,073	+				-4.1
2,910,074	-				+2.0
2,910,102	+				-0.5
2,910,103	-				+0.4
2,910,103	-				+0.8
2,910,103	-				+1.6
2,910,135	-				-0.3
2,910,135	-				+0.6
2,910,189	-				-1.8
2,910,190	-				-2.8
2,910,259	+				-1.1
2,910,259	+				+0.4
2,910,260	-				+0.1
2,910,489	+		ABZR87_RS13800	0.17	+0.8
2,910,490	-		ABZR87_RS13800	0.17	-0.2
2,910,567	-		ABZR87_RS13800	0.21	+0.6
2,910,567	-		ABZR87_RS13800	0.21	-0.2
2,910,567	-		ABZR87_RS13800	0.21	+1.0
2,910,567	-		ABZR87_RS13800	0.21	+2.0
2,910,727	-		ABZR87_RS13800	0.30	+1.0
2,910,733	+		ABZR87_RS13800	0.30	-0.7
2,910,733	+		ABZR87_RS13800	0.30	+1.2
2,910,733	+		ABZR87_RS13800	0.30	-2.1
2,910,786	+		ABZR87_RS13800	0.33	-0.1
2,910,786	+		ABZR87_RS13800	0.33	+0.8
2,910,786	+		ABZR87_RS13800	0.33	-0.2
2,910,787	-		ABZR87_RS13800	0.33	+2.0
2,910,787	-		ABZR87_RS13800	0.33	+1.3
2,910,787	-		ABZR87_RS13800	0.33	+0.8
2,910,787	-		ABZR87_RS13800	0.33	-0.1
2,910,792	+		ABZR87_RS13800	0.33	+1.6
2,910,792	+		ABZR87_RS13800	0.33	+2.9
2,910,792	+		ABZR87_RS13800	0.33	+0.4
2,910,792	+		ABZR87_RS13800	0.33	+0.8
2,910,793	-		ABZR87_RS13800	0.33	-1.0
2,910,793	-		ABZR87_RS13800	0.33	-1.0
2,910,793	-		ABZR87_RS13800	0.33	+0.7
2,910,793	-		ABZR87_RS13800	0.33	+0.5
2,910,976	-		ABZR87_RS13800	0.43	-0.6
2,911,010	+		ABZR87_RS13800	0.44	-2.5
2,911,119	+		ABZR87_RS13800	0.50	+1.5
2,911,119	+		ABZR87_RS13800	0.50	+0.4
2,911,119	+		ABZR87_RS13800	0.50	+0.7
2,911,119	+		ABZR87_RS13800	0.50	+1.0
2,911,119	+		ABZR87_RS13800	0.50	-0.3
2,911,120	-		ABZR87_RS13800	0.50	+0.3
2,911,120	-		ABZR87_RS13800	0.50	+1.5
2,911,120	-		ABZR87_RS13800	0.50	+1.2
2,911,250	+		ABZR87_RS13800	0.57	+1.5
2,911,250	+		ABZR87_RS13800	0.57	+0.9
2,911,251	-		ABZR87_RS13800	0.57	+0.0
2,911,251	-		ABZR87_RS13800	0.57	+0.6
2,911,334	+		ABZR87_RS13800	0.61	+0.7
2,911,334	+		ABZR87_RS13800	0.61	-0.4
2,911,335	-		ABZR87_RS13800	0.62	+1.3
2,911,335	-		ABZR87_RS13800	0.62	+2.7
2,911,335	-		ABZR87_RS13800	0.62	+1.0
2,911,414	+		ABZR87_RS13800	0.66	+0.7
2,911,414	+		ABZR87_RS13800	0.66	+0.5
2,911,414	+		ABZR87_RS13800	0.66	+2.2
2,911,415	-		ABZR87_RS13800	0.66	+1.1
2,911,415	-		ABZR87_RS13800	0.66	+2.0
2,911,415	-		ABZR87_RS13800	0.66	-1.6
2,911,554	+		ABZR87_RS13800	0.73	-0.0
2,911,555	-		ABZR87_RS13800	0.73	+0.9
2,911,555	-		ABZR87_RS13800	0.73	-2.8
2,911,555	-		ABZR87_RS13800	0.73	+2.7
2,911,555	-		ABZR87_RS13800	0.73	+1.3
2,911,668	+		ABZR87_RS13800	0.79	-1.3
2,911,668	+		ABZR87_RS13800	0.79	-4.0
2,911,668	+		ABZR87_RS13800	0.79	+1.5
2,911,669	-		ABZR87_RS13800	0.79	-1.5
2,911,669	-		ABZR87_RS13800	0.79	+1.1
2,911,669	-		ABZR87_RS13800	0.79	+1.6
2,911,669	-		ABZR87_RS13800	0.79	-0.2
2,911,669	-		ABZR87_RS13800	0.79	-0.5
2,911,674	+		ABZR87_RS13800	0.79	+1.5
2,911,674	+		ABZR87_RS13800	0.79	-0.8
2,911,674	+		ABZR87_RS13800	0.79	+1.0
2,911,674	+		ABZR87_RS13800	0.79	+0.7
2,911,674	+		ABZR87_RS13800	0.79	+0.0
2,911,675	-		ABZR87_RS13800	0.79	+0.7
2,911,675	-		ABZR87_RS13800	0.79	+1.9
2,911,728	+		ABZR87_RS13800	0.82	+0.7
2,911,728	+		ABZR87_RS13800	0.82	+0.8
2,911,728	+		ABZR87_RS13800	0.82	-0.8
2,911,728	+		ABZR87_RS13800	0.82	+1.2
2,911,728	+		ABZR87_RS13800	0.82	+0.6
2,911,729	-		ABZR87_RS13800	0.82	+0.7
2,911,729	-		ABZR87_RS13800	0.82	+0.7
2,911,729	-		ABZR87_RS13800	0.82	-0.6
2,911,944	+				-1.3
2,911,945	-				+1.4
2,912,192	-				+0.0
2,912,251	+		ABZR87_RS13805	0.22	+1.0
2,912,251	+		ABZR87_RS13805	0.22	-0.4
2,912,252	-		ABZR87_RS13805	0.22	-0.6
2,912,252	-		ABZR87_RS13805	0.22	-0.2
2,912,300	-		ABZR87_RS13805	0.33	-2.4
2,912,300	-		ABZR87_RS13805	0.33	-3.8
2,912,438	+		ABZR87_RS13805	0.63	-1.1
2,912,438	+		ABZR87_RS13805	0.63	-0.5
2,912,438	+		ABZR87_RS13805	0.63	-0.7
2,912,438	+		ABZR87_RS13805	0.63	-2.0
2,912,439	-		ABZR87_RS13805	0.63	-1.8
2,912,439	-		ABZR87_RS13805	0.63	-2.7
2,912,479	+		ABZR87_RS13805	0.72	+0.3
2,912,480	-		ABZR87_RS13805	0.72	-1.0
2,912,480	-		ABZR87_RS13805	0.72	-2.4
2,912,563	+				-0.1
2,912,563	+				-2.4
2,912,564	-				-0.0
2,912,564	-				-0.1
2,912,564	-				-0.1
2,912,606	+				+0.8
2,912,795	+				-4.4
2,912,795	+				+0.2
2,912,795	+				+1.0
2,912,795	+				-3.1
2,912,796	-				-0.5
2,912,796	-				+1.0
2,912,796	-				-2.5
2,912,796	-				-1.5
2,912,796	-				+1.4
2,912,796	-				-0.1
2,912,796	-				+0.7
2,912,987	+		ABZR87_RS13810	0.11	-2.3
2,912,987	+		ABZR87_RS13810	0.11	+2.8
2,912,987	+		ABZR87_RS13810	0.11	+0.4
2,912,988	-		ABZR87_RS13810	0.11	-0.1
2,912,988	-		ABZR87_RS13810	0.11	-2.4
2,913,010	-		ABZR87_RS13810	0.12	-2.0
2,913,010	-		ABZR87_RS13810	0.12	+1.0
2,913,010	-		ABZR87_RS13810	0.12	+2.1
2,913,010	-		ABZR87_RS13810	0.12	-0.4
2,913,010	-		ABZR87_RS13810	0.12	+0.8
2,913,045	+		ABZR87_RS13810	0.15	+1.5