Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23755 and AZOBR_RS23760 are separated by 10 nucleotides AZOBR_RS23760 and AZOBR_RS23765 are separated by 131 nucleotides AZOBR_RS23765 and AZOBR_RS23770 are separated by 152 nucleotides
AZOBR_RS23755: AZOBR_RS23755 - multidrug transporter AcrB, at 360,166 to 363,387
_RS23755
AZOBR_RS23760: AZOBR_RS23760 - RND transporter, at 363,398 to 364,447
_RS23760
AZOBR_RS23765: AZOBR_RS23765 - sulfurtransferase, at 364,579 to 364,782
_RS23765
AZOBR_RS23770: AZOBR_RS23770 - hypothetical protein, at 364,935 to 366,740
_RS23770
Position (kb) 363
364
365 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 362.774 kb on + strand, within AZOBR_RS23755 at 363.131 kb on + strand at 363.131 kb on + strand at 363.131 kb on + strand at 363.131 kb on + strand at 363.132 kb on - strand at 363.132 kb on - strand at 363.621 kb on + strand, within AZOBR_RS23760 at 363.708 kb on + strand, within AZOBR_RS23760 at 363.709 kb on - strand, within AZOBR_RS23760 at 363.709 kb on - strand, within AZOBR_RS23760 at 363.709 kb on - strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.855 kb on + strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 363.856 kb on - strand, within AZOBR_RS23760 at 364.817 kb on + strand at 364.817 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.998 kb on + strand at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.395 kb on - strand, within AZOBR_RS23770
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 362,774 + AZOBR_RS23755 0.81 +0.2 363,131 + +0.3 363,131 + -1.0 363,131 + -3.0 363,131 + +0.8 363,132 - +0.6 363,132 - -3.5 363,621 + AZOBR_RS23760 0.21 +1.9 363,708 + AZOBR_RS23760 0.30 +0.1 363,709 - AZOBR_RS23760 0.30 -0.3 363,709 - AZOBR_RS23760 0.30 +0.9 363,709 - AZOBR_RS23760 0.30 +1.0 363,855 + AZOBR_RS23760 0.44 +1.4 363,855 + AZOBR_RS23760 0.44 -0.6 363,855 + AZOBR_RS23760 0.44 +1.5 363,855 + AZOBR_RS23760 0.44 -3.8 363,855 + AZOBR_RS23760 0.44 +0.6 363,855 + AZOBR_RS23760 0.44 +0.1 363,855 + AZOBR_RS23760 0.44 +1.5 363,855 + AZOBR_RS23760 0.44 +1.0 363,855 + AZOBR_RS23760 0.44 -0.5 363,855 + AZOBR_RS23760 0.44 +1.9 363,856 - AZOBR_RS23760 0.44 -2.2 363,856 - AZOBR_RS23760 0.44 -0.2 363,856 - AZOBR_RS23760 0.44 +0.6 363,856 - AZOBR_RS23760 0.44 -0.9 363,856 - AZOBR_RS23760 0.44 -0.7 363,856 - AZOBR_RS23760 0.44 -0.3 364,817 + -0.8 364,817 + -1.4 364,825 + +1.6 364,825 + -4.0 364,825 + +1.6 364,825 + -0.1 364,825 + +0.1 364,826 - +0.1 364,826 - +0.5 364,826 - -2.2 364,826 - +0.8 364,826 - +0.9 364,826 - -0.8 364,826 - -2.1 364,826 - +0.5 364,998 + -1.1 365,163 + AZOBR_RS23770 0.13 -0.8 365,163 + AZOBR_RS23770 0.13 -2.2 365,163 + AZOBR_RS23770 0.13 +1.4 365,163 + AZOBR_RS23770 0.13 +0.7 365,164 - AZOBR_RS23770 0.13 -2.1 365,164 - AZOBR_RS23770 0.13 -1.3 365,164 - AZOBR_RS23770 0.13 -0.2 365,164 - AZOBR_RS23770 0.13 -1.1 365,395 - AZOBR_RS23770 0.25 -0.5
Or see this region's nucleotide sequence