Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15985

Experiment: Suberic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Suberic (C)
3,376,366	+		ABZR87_RS15980	0.26	-0.0
3,376,366	+		ABZR87_RS15980	0.26	-0.7
3,376,397	-		ABZR87_RS15980	0.28	+2.1
3,376,397	-		ABZR87_RS15980	0.28	-0.3
3,376,452	+		ABZR87_RS15980	0.34	-0.4
3,376,453	-		ABZR87_RS15980	0.34	+0.6
3,376,486	+		ABZR87_RS15980	0.37	-0.2
3,376,487	-		ABZR87_RS15980	0.37	-0.0
3,376,487	-		ABZR87_RS15980	0.37	-0.1
3,376,487	-		ABZR87_RS15980	0.37	+0.5
3,376,582	+		ABZR87_RS15980	0.46	-1.2
3,376,807	+		ABZR87_RS15980	0.67	+1.3
3,376,841	+		ABZR87_RS15980	0.70	+0.0
3,376,841	+		ABZR87_RS15980	0.70	+0.0
3,376,842	-		ABZR87_RS15980	0.70	-1.7
3,377,065	+				+0.5
3,377,065	+				+0.0
3,377,065	+				-1.2
3,377,065	+				+1.0
3,377,066	-				+0.4
3,377,066	-				-0.1
3,377,109	+				+0.2
3,377,147	-				-1.2
3,377,147	-				-0.2
3,377,226	+				-0.4
3,377,226	+				+0.0
3,377,226	+				+0.7
3,377,227	-				-0.2
3,377,227	-				+1.8
3,377,292	+				+0.6
3,377,292	+				-0.2
3,377,292	+				+0.1
3,377,292	+				+0.4
3,377,292	+				-0.1
3,377,293	-				-0.4
3,377,319	+				-1.4
3,377,320	-				+1.2
3,377,355	+				+1.0
3,377,355	+				-0.8
3,377,355	+				+0.8
3,377,356	-				-0.1
3,377,356	-				-0.6
3,377,388	+				+1.0
3,377,388	+				+0.1
3,377,388	+				-0.8
3,377,389	-				+0.3
3,377,416	-				-0.8
3,377,619	+		ABZR87_RS15985	0.17	-1.4
3,377,619	+		ABZR87_RS15985	0.17	-0.6
3,377,620	-		ABZR87_RS15985	0.17	+0.3
3,377,620	-		ABZR87_RS15985	0.17	-0.1
3,377,620	-		ABZR87_RS15985	0.17	+0.6
3,377,635	-		ABZR87_RS15985	0.17	+1.3
3,377,727	+		ABZR87_RS15985	0.21	-0.8
3,377,733	+		ABZR87_RS15985	0.21	+0.4
3,377,733	+		ABZR87_RS15985	0.21	+1.2
3,377,734	-		ABZR87_RS15985	0.21	-1.1
3,377,734	-		ABZR87_RS15985	0.21	-0.2
3,377,784	+		ABZR87_RS15985	0.23	+0.9
3,377,803	-		ABZR87_RS15985	0.24	+0.5
3,377,803	-		ABZR87_RS15985	0.24	-1.0
3,377,964	+		ABZR87_RS15985	0.30	+0.5
3,377,964	+		ABZR87_RS15985	0.30	-1.2
3,378,000	+		ABZR87_RS15985	0.31	+0.6
3,378,001	-		ABZR87_RS15985	0.31	+1.6
3,378,001	-		ABZR87_RS15985	0.31	-0.5
3,378,001	-		ABZR87_RS15985	0.31	+0.5
3,378,001	-		ABZR87_RS15985	0.31	+0.9
3,378,162	+		ABZR87_RS15985	0.37	+0.3
3,378,163	-		ABZR87_RS15985	0.37	-0.2
3,378,165	+		ABZR87_RS15985	0.37	+0.4
3,378,166	-		ABZR87_RS15985	0.37	-0.2
3,378,255	+		ABZR87_RS15985	0.41	+0.6
3,378,255	+		ABZR87_RS15985	0.41	-0.4
3,378,255	+		ABZR87_RS15985	0.41	-0.9
3,378,256	-		ABZR87_RS15985	0.41	-0.1
3,378,256	-		ABZR87_RS15985	0.41	-2.6
3,378,318	+		ABZR87_RS15985	0.43	-0.7
3,378,319	-		ABZR87_RS15985	0.43	-0.2
3,378,432	+		ABZR87_RS15985	0.48	+0.1
3,378,433	-		ABZR87_RS15985	0.48	-1.5
3,378,433	-		ABZR87_RS15985	0.48	+0.6
3,378,462	+		ABZR87_RS15985	0.49	+0.8
3,378,462	+		ABZR87_RS15985	0.49	-0.2
3,378,462	+		ABZR87_RS15985	0.49	-0.2
3,378,463	-		ABZR87_RS15985	0.49	-1.6
3,378,498	+		ABZR87_RS15985	0.50	+0.9
3,378,499	-		ABZR87_RS15985	0.50	+0.8
3,378,499	-		ABZR87_RS15985	0.50	+0.2
3,378,499	-		ABZR87_RS15985	0.50	+0.5
3,378,541	+		ABZR87_RS15985	0.52	-1.2
3,378,542	-		ABZR87_RS15985	0.52	+0.4
3,378,542	-		ABZR87_RS15985	0.52	-0.4
3,378,542	-		ABZR87_RS15985	0.52	+0.5
3,378,589	+		ABZR87_RS15985	0.54	-0.1
3,378,589	+		ABZR87_RS15985	0.54	+0.4
3,378,590	-		ABZR87_RS15985	0.54	-0.2
3,378,590	-		ABZR87_RS15985	0.54	-0.5
3,378,732	+		ABZR87_RS15985	0.59	+0.8
3,378,733	-		ABZR87_RS15985	0.59	+0.2
3,378,733	-		ABZR87_RS15985	0.59	-0.7
3,378,840	+		ABZR87_RS15985	0.63	-0.7
3,378,843	+		ABZR87_RS15985	0.63	-1.7
3,378,843	+		ABZR87_RS15985	0.63	-0.6
3,378,844	-		ABZR87_RS15985	0.63	-0.6
3,378,937	+		ABZR87_RS15985	0.67	-0.8
3,378,937	+		ABZR87_RS15985	0.67	-1.3
3,378,937	+		ABZR87_RS15985	0.67	-0.6
3,378,937	+		ABZR87_RS15985	0.67	-0.2
3,378,937	+		ABZR87_RS15985	0.67	+0.2
3,378,937	+		ABZR87_RS15985	0.67	+0.4
3,378,938	-		ABZR87_RS15985	0.67	+0.9
3,378,938	-		ABZR87_RS15985	0.67	+0.1
3,378,938	-		ABZR87_RS15985	0.67	+0.5
3,378,938	-		ABZR87_RS15985	0.67	-1.2
3,379,033	+		ABZR87_RS15985	0.70	-1.9
3,379,404	+		ABZR87_RS15985	0.85	-3.4
3,379,405	-		ABZR87_RS15985	0.85	+1.4
3,379,458	+		ABZR87_RS15985	0.87	+0.3
3,379,458	+		ABZR87_RS15985	0.87	+0.0
3,379,458	+		ABZR87_RS15985	0.87	+1.3
3,379,891	+				+0.4
3,380,063	+				-0.6
3,380,063	+				+0.6
3,380,063	+				+0.5
3,380,063	+				+1.0
3,380,063	+				+0.5
3,380,063	+				+1.6
3,380,098	+				-0.2
3,380,098	+				+0.6
3,380,129	-				+0.3
3,380,179	+				+0.6
3,380,179	+				-0.1
3,380,215	+				-1.7
3,380,440	+		ABZR87_RS15990	0.24	+0.1
3,380,440	+		ABZR87_RS15990	0.24	+0.2
3,380,440	+		ABZR87_RS15990	0.24	-1.6
3,380,440	+		ABZR87_RS15990	0.24	-1.2
3,380,440	+		ABZR87_RS15990	0.24	-0.2
3,380,440	+		ABZR87_RS15990	0.24	-0.8
3,380,440	+		ABZR87_RS15990	0.24	+0.5
3,380,441	-		ABZR87_RS15990	0.24	+0.0
3,380,441	-		ABZR87_RS15990	0.24	-1.1
3,380,441	-		ABZR87_RS15990	0.24	-0.6
3,380,441	-		ABZR87_RS15990	0.24	+0.2
3,380,443	+		ABZR87_RS15990	0.25	-1.1
3,380,444	-		ABZR87_RS15990	0.25	+0.1
3,380,527	+		ABZR87_RS15990	0.30	+0.4
3,380,527	+		ABZR87_RS15990	0.30	-0.7
3,380,542	+		ABZR87_RS15990	0.31	-1.0
3,380,542	+		ABZR87_RS15990	0.31	-0.4
3,380,543	-		ABZR87_RS15990	0.31	-0.8
3,380,779	+		ABZR87_RS15990	0.47	-0.9
3,380,780	-		ABZR87_RS15990	0.47	-0.0
3,380,780	-		ABZR87_RS15990	0.47	+0.7
3,380,780	-		ABZR87_RS15990	0.47	-0.4
3,380,780	-		ABZR87_RS15990	0.47	-0.2
3,380,780	-		ABZR87_RS15990	0.47	+0.3
3,380,780	-		ABZR87_RS15990	0.47	+0.4