Experiment: 5-Aminovaleric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1387 and SMa1389 are separated by 15 nucleotides SMa1389 and SMa1391 are separated by 116 nucleotides SMa1391 and SMa1394 are separated by 16 nucleotides
SMa1387: SMa1387 - LysR family transcriptional regulator, at 764,198 to 765,112
SMa1387
SMa1389: SMa1389 - EtfA2 electron-transport flavoprotein, alpha-subunit, at 765,128 to 766,057
SMa1389
SMa1391: SMa1391 - EtfB2 electron transport flavoprotein, beta subunit, at 766,174 to 766,923
SMa1391
SMa1394: SMa1394 - hypothetical protein, at 766,940 to 767,797
SMa1394
Position (kb) 765
766
767 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 764.181 kb on + strand at 764.261 kb on + strand at 764.262 kb on - strand at 764.285 kb on + strand at 764.285 kb on + strand at 764.286 kb on - strand at 764.655 kb on + strand, within SMa1387 at 764.655 kb on + strand, within SMa1387 at 764.655 kb on + strand, within SMa1387 at 764.656 kb on - strand, within SMa1387 at 764.656 kb on - strand, within SMa1387 at 764.656 kb on - strand, within SMa1387 at 764.715 kb on - strand, within SMa1387 at 764.732 kb on + strand, within SMa1387 at 764.770 kb on + strand, within SMa1387 at 764.770 kb on + strand, within SMa1387 at 764.771 kb on - strand, within SMa1387 at 764.823 kb on + strand, within SMa1387 at 764.823 kb on + strand, within SMa1387 at 764.823 kb on + strand, within SMa1387 at 764.823 kb on + strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.824 kb on - strand, within SMa1387 at 764.826 kb on + strand, within SMa1387 at 764.827 kb on - strand, within SMa1387 at 764.916 kb on - strand, within SMa1387 at 764.916 kb on - strand, within SMa1387 at 764.916 kb on - strand, within SMa1387 at 764.951 kb on - strand, within SMa1387 at 765.024 kb on - strand at 766.886 kb on + strand at 766.915 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Aminovaleric (C) remove 764,181 + -0.4 764,261 + +0.3 764,262 - -0.5 764,285 + +0.2 764,285 + +0.3 764,286 - -0.3 764,655 + SMa1387 0.50 +0.0 764,655 + SMa1387 0.50 -1.6 764,655 + SMa1387 0.50 +0.6 764,656 - SMa1387 0.50 +0.2 764,656 - SMa1387 0.50 -1.8 764,656 - SMa1387 0.50 -0.1 764,715 - SMa1387 0.57 +0.8 764,732 + SMa1387 0.58 -0.6 764,770 + SMa1387 0.63 -2.8 764,770 + SMa1387 0.63 -0.3 764,771 - SMa1387 0.63 +0.1 764,823 + SMa1387 0.68 -0.4 764,823 + SMa1387 0.68 +0.3 764,823 + SMa1387 0.68 -0.2 764,823 + SMa1387 0.68 +2.0 764,824 - SMa1387 0.68 +0.3 764,824 - SMa1387 0.68 -0.4 764,824 - SMa1387 0.68 +0.4 764,824 - SMa1387 0.68 +0.8 764,824 - SMa1387 0.68 +0.2 764,824 - SMa1387 0.68 +0.4 764,826 + SMa1387 0.69 -0.5 764,827 - SMa1387 0.69 -0.8 764,916 - SMa1387 0.78 -0.2 764,916 - SMa1387 0.78 -0.8 764,916 - SMa1387 0.78 +1.1 764,951 - SMa1387 0.82 -0.5 765,024 - -0.3 766,886 + -1.6 766,915 + -0.2
Or see this region's nucleotide sequence