Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26430 and AZOBR_RS26435 are separated by 220 nucleotides
AZOBR_RS26430: AZOBR_RS26430 - ABC transporter permease, at 74,384 to 76,273
_RS26430
AZOBR_RS26435: AZOBR_RS26435 - ABC transporter substrate-binding protein, at 76,494 to 77,510
_RS26435
Position (kb) 74
75
76
77 Strain fitness (log2 ratio) -2
-1
0
1
2 at 73.444 kb on + strand at 73.444 kb on + strand at 73.444 kb on + strand at 73.445 kb on - strand at 74.280 kb on + strand at 74.304 kb on + strand at 74.304 kb on + strand at 74.514 kb on + strand at 74.515 kb on - strand at 74.515 kb on - strand at 74.517 kb on + strand at 74.581 kb on - strand, within AZOBR_RS26430 at 74.581 kb on - strand, within AZOBR_RS26430 at 74.589 kb on + strand, within AZOBR_RS26430 at 74.856 kb on + strand, within AZOBR_RS26430 at 74.857 kb on - strand, within AZOBR_RS26430 at 74.883 kb on + strand, within AZOBR_RS26430 at 74.884 kb on - strand, within AZOBR_RS26430 at 74.884 kb on - strand, within AZOBR_RS26430 at 74.910 kb on + strand, within AZOBR_RS26430 at 74.911 kb on - strand, within AZOBR_RS26430 at 75.345 kb on + strand, within AZOBR_RS26430 at 75.346 kb on - strand, within AZOBR_RS26430 at 75.366 kb on + strand, within AZOBR_RS26430 at 75.366 kb on + strand, within AZOBR_RS26430 at 75.366 kb on + strand, within AZOBR_RS26430 at 75.367 kb on - strand, within AZOBR_RS26430 at 75.367 kb on - strand, within AZOBR_RS26430 at 75.651 kb on + strand, within AZOBR_RS26430 at 75.652 kb on - strand, within AZOBR_RS26430 at 76.095 kb on + strand at 76.546 kb on + strand at 76.546 kb on + strand at 76.547 kb on - strand at 76.828 kb on + strand, within AZOBR_RS26435 at 77.153 kb on - strand, within AZOBR_RS26435 at 77.153 kb on - strand, within AZOBR_RS26435 at 77.153 kb on - strand, within AZOBR_RS26435
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 73,444 + -1.5 73,444 + -0.3 73,444 + -1.5 73,445 - -1.0 74,280 + +1.0 74,304 + +1.3 74,304 + +0.2 74,514 + +0.9 74,515 - -1.5 74,515 - +1.5 74,517 + -2.3 74,581 - AZOBR_RS26430 0.10 -0.9 74,581 - AZOBR_RS26430 0.10 -0.5 74,589 + AZOBR_RS26430 0.11 -0.5 74,856 + AZOBR_RS26430 0.25 -0.1 74,857 - AZOBR_RS26430 0.25 -0.1 74,883 + AZOBR_RS26430 0.26 +0.3 74,884 - AZOBR_RS26430 0.26 +0.4 74,884 - AZOBR_RS26430 0.26 +1.0 74,910 + AZOBR_RS26430 0.28 +0.4 74,911 - AZOBR_RS26430 0.28 -0.1 75,345 + AZOBR_RS26430 0.51 -0.7 75,346 - AZOBR_RS26430 0.51 -1.6 75,366 + AZOBR_RS26430 0.52 -2.5 75,366 + AZOBR_RS26430 0.52 +0.5 75,366 + AZOBR_RS26430 0.52 -1.3 75,367 - AZOBR_RS26430 0.52 -1.1 75,367 - AZOBR_RS26430 0.52 -0.7 75,651 + AZOBR_RS26430 0.67 -1.4 75,652 - AZOBR_RS26430 0.67 -0.5 76,095 + +0.2 76,546 + +2.1 76,546 + +0.7 76,547 - +0.7 76,828 + AZOBR_RS26435 0.33 +0.5 77,153 - AZOBR_RS26435 0.65 +0.8 77,153 - AZOBR_RS26435 0.65 -0.7 77,153 - AZOBR_RS26435 0.65 -2.5
Or see this region's nucleotide sequence