Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03360 and AZOBR_RS03365 overlap by 4 nucleotides
AZOBR_RS03360: AZOBR_RS03360 - glycosyl transferase family 1, at 711,791 to 712,921
_RS03360
AZOBR_RS03365: AZOBR_RS03365 - glycosyl transferase, at 712,918 to 714,189
_RS03365
Position (kb) 711
712
713 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 710.827 kb on - strand at 710.827 kb on - strand at 710.928 kb on + strand at 710.929 kb on - strand at 710.929 kb on - strand at 710.968 kb on - strand at 711.238 kb on - strand at 711.417 kb on + strand at 711.417 kb on + strand at 711.418 kb on - strand at 711.418 kb on - strand at 711.450 kb on + strand at 711.450 kb on + strand at 711.450 kb on + strand at 711.451 kb on - strand at 711.532 kb on - strand at 711.532 kb on - strand at 712.266 kb on + strand, within AZOBR_RS03360 at 712.407 kb on + strand, within AZOBR_RS03360 at 712.452 kb on + strand, within AZOBR_RS03360 at 712.492 kb on - strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.633 kb on - strand, within AZOBR_RS03360 at 712.692 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.828 kb on - strand at 712.876 kb on - strand at 713.463 kb on - strand, within AZOBR_RS03365
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 710,827 - +2.1 710,827 - +0.6 710,928 + -3.1 710,929 - +0.7 710,929 - -1.0 710,968 - +3.1 711,238 - -0.1 711,417 + -1.8 711,417 + -0.8 711,418 - +1.6 711,418 - +0.4 711,450 + +1.2 711,450 + +1.1 711,450 + -3.1 711,451 - +2.0 711,532 - +0.4 711,532 - -0.1 712,266 + AZOBR_RS03360 0.42 +1.3 712,407 + AZOBR_RS03360 0.54 +2.5 712,452 + AZOBR_RS03360 0.58 -0.1 712,492 - AZOBR_RS03360 0.62 +0.2 712,500 + AZOBR_RS03360 0.63 -0.6 712,500 + AZOBR_RS03360 0.63 -1.9 712,500 + AZOBR_RS03360 0.63 -0.3 712,500 + AZOBR_RS03360 0.63 +2.5 712,500 + AZOBR_RS03360 0.63 +0.9 712,501 - AZOBR_RS03360 0.63 -0.2 712,501 - AZOBR_RS03360 0.63 -0.5 712,501 - AZOBR_RS03360 0.63 +1.5 712,501 - AZOBR_RS03360 0.63 +1.6 712,633 - AZOBR_RS03360 0.74 +0.8 712,692 + AZOBR_RS03360 0.80 +0.2 712,785 + AZOBR_RS03360 0.88 +0.5 712,785 + AZOBR_RS03360 0.88 -0.1 712,786 - AZOBR_RS03360 0.88 +0.9 712,786 - AZOBR_RS03360 0.88 -0.5 712,786 - AZOBR_RS03360 0.88 -1.2 712,786 - AZOBR_RS03360 0.88 +0.4 712,786 - AZOBR_RS03360 0.88 -0.0 712,786 - AZOBR_RS03360 0.88 +0.3 712,827 + -0.3 712,827 + +1.0 712,827 + +1.1 712,827 + -1.9 712,827 + +2.9 712,828 - -0.2 712,876 - +0.8 713,463 - AZOBR_RS03365 0.43 +0.5
Or see this region's nucleotide sequence