Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2867

Experiment: BHIS with Dimetridazole 0.0015625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimetridazole 0.0015625 mM
3,586,613	+		BT2866	0.18	-1.4
3,586,613	+		BT2866	0.18	-1.7
3,586,634	-		BT2866	0.19	-1.2
3,586,676	+		BT2866	0.23	-1.2
3,586,677	-		BT2866	0.23	-0.7
3,586,677	-		BT2866	0.23	-1.5
3,586,677	-		BT2866	0.23	-1.7
3,586,677	-		BT2866	0.23	-1.3
3,586,679	+		BT2866	0.23	-0.6
3,586,680	-		BT2866	0.24	-0.2
3,586,680	-		BT2866	0.24	-3.0
3,586,687	+		BT2866	0.24	-2.1
3,586,687	+		BT2866	0.24	-1.0
3,586,688	-		BT2866	0.24	-3.0
3,586,749	-		BT2866	0.30	-0.7
3,586,846	+		BT2866	0.38	-0.2
3,586,846	+		BT2866	0.38	-0.2
3,586,847	-		BT2866	0.38	-2.2
3,586,879	+		BT2866	0.41	-0.2
3,586,879	+		BT2866	0.41	-1.0
3,586,935	-		BT2866	0.46	-2.5
3,586,958	-		BT2866	0.48	-2.3
3,586,997	-		BT2866	0.51	+0.2
3,587,012	+		BT2866	0.53	-0.9
3,587,012	+		BT2866	0.53	-3.3
3,587,018	-		BT2866	0.53	-0.8
3,587,038	-		BT2866	0.55	-2.2
3,587,195	-		BT2866	0.69	-2.7
3,587,242	+		BT2866	0.73	-1.0
3,587,242	+		BT2866	0.73	-1.3
3,587,242	+		BT2866	0.73	-1.2
3,587,263	+		BT2866	0.75	-1.8
3,587,335	+		BT2866	0.81	-3.1
3,587,364	+		BT2866	0.84	-1.2
3,587,392	+		BT2866	0.86	-2.2
3,587,393	-		BT2866	0.86	-2.7
3,587,440	+				-1.5
3,587,441	-				+0.8
3,587,476	-				-3.0
3,587,520	+				+0.3
3,587,534	-				-1.2
3,587,623	-				-0.2
3,587,626	+				-0.8
3,587,640	+				-0.2
3,587,657	-				-1.5
3,587,715	+		BT2867	0.13	+0.8
3,587,718	-		BT2867	0.14	-0.5
3,587,787	+		BT2867	0.19	-1.2
3,587,842	-		BT2867	0.24	-2.5
3,587,871	+		BT2867	0.26	-1.7
3,587,900	-		BT2867	0.28	-2.0
3,587,984	+		BT2867	0.35	-1.2
3,587,984	+		BT2867	0.35	-0.2
3,588,001	-		BT2867	0.36	-0.2
3,588,010	+		BT2867	0.37	-0.2
3,588,011	-		BT2867	0.37	-2.3
3,588,086	-		BT2867	0.43	-1.5
3,588,089	-		BT2867	0.43	-2.0
3,588,089	-		BT2867	0.43	+1.2
3,588,092	+				-1.2
3,588,123	+		BT2867	0.46	-1.7
3,588,124	-		BT2867	0.46	-1.6
3,588,124	-		BT2867	0.46	-1.4
3,588,126	+		BT2867	0.46	-0.2
3,588,127	-		BT2867	0.47	-1.2
3,588,139	-		BT2867	0.47	-2.2
3,588,141	+		BT2867	0.48	-0.2
3,588,196	-		BT2867	0.52	-0.2
3,588,230	+		BT2867	0.55	-0.2
3,588,231	-		BT2867	0.55	-1.6
3,588,231	-		BT2867	0.55	-1.2
3,588,236	-		BT2867	0.55	-0.2
3,588,297	-				-1.7
3,588,339	+		BT2867	0.64	-1.2
3,588,340	-		BT2867	0.64	-3.2
3,588,340	-		BT2867	0.64	-1.4
3,588,341	+		BT2867	0.64	-2.7
3,588,341	+		BT2867	0.64	-1.5
3,588,341	+		BT2867	0.64	+0.3
3,588,341	+		BT2867	0.64	-3.0
3,588,341	+		BT2867	0.64	-0.9
3,588,341	+		BT2867	0.64	-0.6
3,588,341	+		BT2867	0.64	-1.4
3,588,341	+		BT2867	0.64	-1.7
3,588,342	-		BT2867	0.64	-2.5
3,588,342	-		BT2867	0.64	-1.7
3,588,342	-		BT2867	0.64	-2.0
3,588,346	-		BT2867	0.64	-1.2
3,588,350	-		BT2867	0.64	-1.2
3,588,376	-		BT2867	0.67	-2.7
3,588,394	+		BT2867	0.68	-0.2
3,588,396	+		BT2867	0.68	-2.2
3,588,396	+		BT2867	0.68	-0.7
3,588,396	+		BT2867	0.68	-1.6
3,588,396	+		BT2867	0.68	-0.2
3,588,396	+		BT2867	0.68	-0.6
3,588,396	+		BT2867	0.68	-4.0
3,588,397	-		BT2867	0.68	-1.7
3,588,412	+		BT2867	0.69	-1.2
3,588,430	+		BT2867	0.71	-2.2
3,588,431	-		BT2867	0.71	-0.9
3,588,488	+		BT2867	0.76	+0.6
3,588,488	+		BT2867	0.76	-1.2
3,588,488	+		BT2867	0.76	-1.2
3,588,489	-		BT2867	0.76	-3.2
3,588,489	-		BT2867	0.76	-1.2
3,588,525	-		BT2867	0.78	-1.2
3,588,550	-		BT2867	0.80	-1.7
3,588,555	+		BT2867	0.81	-1.2
3,588,556	-		BT2867	0.81	-1.5
3,588,557	+		BT2867	0.81	-2.2
3,588,557	+		BT2867	0.81	-3.7
3,588,634	-		BT2867	0.87	-1.3
3,588,660	-		BT2867	0.89	+1.3
3,588,680	-				-3.0
3,588,680	-				-0.9
3,588,699	+				-2.7
3,588,699	+				-1.3
3,588,764	-				-0.2
3,588,770	-				-3.0
3,588,806	+				-1.8
3,588,806	+				-1.1
3,588,816	+				-0.2
3,588,816	+				-2.5
3,588,819	+				-1.2
3,588,834	+				-1.2
3,588,838	+				-0.2
3,588,848	+				-1.5
3,588,872	+				-0.8
3,588,895	+				-0.2
3,588,895	+				-1.8
3,588,898	-				-0.2
3,588,898	-				+0.8
3,588,939	-		BT2868	0.13	-2.5
3,588,939	-		BT2868	0.13	+0.4
3,588,939	-		BT2868	0.13	-2.5
3,588,977	+		BT2868	0.17	-1.5
3,588,978	-		BT2868	0.17	-1.2
3,588,987	+		BT2868	0.18	-0.7
3,588,996	+		BT2868	0.19	-1.8
3,589,015	+		BT2868	0.21	-2.2
3,589,045	+		BT2868	0.24	-0.8
3,589,046	-		BT2868	0.24	-2.2
3,589,075	+		BT2868	0.27	-3.2
3,589,094	+		BT2868	0.29	-1.2
3,589,094	+		BT2868	0.29	-2.2
3,589,097	-		BT2868	0.29	-0.2
3,589,097	-		BT2868	0.29	-1.7
3,589,109	-		BT2868	0.30	-1.2
3,589,115	-		BT2868	0.31	-0.8
3,589,115	-		BT2868	0.31	-1.8
3,589,115	-		BT2868	0.31	-1.8
3,589,118	-		BT2868	0.31	-1.3
3,589,120	-		BT2868	0.32	-2.2
3,589,120	-		BT2868	0.32	-2.1
3,589,158	+		BT2868	0.35	-2.0
3,589,167	+		BT2868	0.36	-0.9
3,589,168	-		BT2868	0.36	-2.5
3,589,168	-		BT2868	0.36	+0.0
3,589,168	-		BT2868	0.36	-1.8
3,589,170	-		BT2868	0.37	-3.2
3,589,239	+		BT2868	0.43	-1.8
3,589,275	+		BT2868	0.47	-2.8
3,589,289	+		BT2868	0.48	+0.5
3,589,319	-		BT2868	0.51	-1.0
3,589,371	+		BT2868	0.57	-0.4
3,589,371	+		BT2868	0.57	-2.0
3,589,374	+		BT2868	0.57	-2.2
3,589,374	+		BT2868	0.57	+0.2
3,589,376	+		BT2868	0.57	-1.0
3,589,377	-		BT2868	0.57	-1.3
3,589,392	+		BT2868	0.59	-1.1
3,589,395	-		BT2868	0.59	-0.9
3,589,421	+		BT2868	0.62	-0.9
3,589,422	-		BT2868	0.62	-1.8
3,589,496	-		BT2868	0.69	-2.2
3,589,496	-		BT2868	0.69	-2.0
3,589,496	-		BT2868	0.69	-3.0
3,589,496	-		BT2868	0.69	-0.2
3,589,513	+		BT2868	0.71	-2.9
3,589,517	+		BT2868	0.71	-1.4
3,589,520	+		BT2868	0.72	-1.2
3,589,557	+		BT2868	0.75	-2.5
3,589,571	-		BT2868	0.77	-2.9
3,589,646	-		BT2868	0.84	-0.2
3,589,646	-		BT2868	0.84	-1.2
3,589,646	-		BT2868	0.84	-1.2
3,589,646	-		BT2868	0.84	-1.0
3,589,648	+		BT2868	0.84	+1.4
3,589,651	-		BT2868	0.85	-2.1
3,589,652	+		BT2868	0.85	-2.2
3,589,669	-		BT2868	0.86	-1.8
3,589,671	+		BT2868	0.87	-1.2
3,589,672	-		BT2868	0.87	-0.5
3,589,716	+				-1.2
3,589,760	+				-0.9
3,589,760	+				-1.2
3,589,761	-				-0.2
3,589,761	-				+0.8
3,589,783	-				-0.2
3,589,786	+				-0.2
3,589,787	-				-0.9