Experiment: water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS06730 and RS_RS06735 are separated by 39 nucleotides RS_RS06735 and RS_RS06740 are separated by 28 nucleotides RS_RS06740 and RS_RS06745 are separated by 111 nucleotides
RS_RS06730: RS_RS06730 - transporter, at 1,429,581 to 1,429,796
_RS06730
RS_RS06735: RS_RS06735 - EAL domain-containing protein, at 1,429,836 to 1,430,741
_RS06735
RS_RS06740: RS_RS06740 - serine hydrolase family protein, at 1,430,770 to 1,431,438
_RS06740
RS_RS06745: RS_RS06745 - sulfate ABC transporter permease subunit CysT, at 1,431,550 to 1,432,464
_RS06745
Position (kb) 1430
1431
1432 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1429.792 kb on + strand at 1429.793 kb on - strand at 1430.150 kb on + strand, within RS_RS06735 at 1430.160 kb on + strand, within RS_RS06735 at 1430.161 kb on - strand, within RS_RS06735 at 1430.161 kb on - strand, within RS_RS06735 at 1430.161 kb on - strand, within RS_RS06735 at 1430.161 kb on - strand, within RS_RS06735 at 1430.355 kb on + strand, within RS_RS06735 at 1430.586 kb on + strand, within RS_RS06735 at 1430.586 kb on + strand, within RS_RS06735 at 1430.587 kb on - strand, within RS_RS06735 at 1430.858 kb on - strand, within RS_RS06740 at 1431.431 kb on - strand at 1431.723 kb on + strand, within RS_RS06745 at 1431.723 kb on + strand, within RS_RS06745 at 1431.724 kb on - strand, within RS_RS06745 at 1431.754 kb on + strand, within RS_RS06745 at 1431.932 kb on - strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745 at 1432.276 kb on + strand, within RS_RS06745
Per-strain Table
Position Strand Gene LocusTag Fraction water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days remove 1,429,792 + +0.6 1,429,793 - +0.4 1,430,150 + RS_RS06735 0.35 +0.1 1,430,160 + RS_RS06735 0.36 -0.4 1,430,161 - RS_RS06735 0.36 +0.3 1,430,161 - RS_RS06735 0.36 +0.1 1,430,161 - RS_RS06735 0.36 -0.4 1,430,161 - RS_RS06735 0.36 +0.0 1,430,355 + RS_RS06735 0.57 +2.9 1,430,586 + RS_RS06735 0.83 +0.8 1,430,586 + RS_RS06735 0.83 +0.1 1,430,587 - RS_RS06735 0.83 -0.8 1,430,858 - RS_RS06740 0.13 +0.4 1,431,431 - -1.1 1,431,723 + RS_RS06745 0.19 -0.7 1,431,723 + RS_RS06745 0.19 -0.8 1,431,724 - RS_RS06745 0.19 +0.0 1,431,754 + RS_RS06745 0.22 -0.9 1,431,932 - RS_RS06745 0.42 -2.5 1,432,276 + RS_RS06745 0.79 -0.6 1,432,276 + RS_RS06745 0.79 -1.4 1,432,276 + RS_RS06745 0.79 -1.0 1,432,276 + RS_RS06745 0.79 -2.3 1,432,276 + RS_RS06745 0.79 +0.5 1,432,276 + RS_RS06745 0.79 -0.4
Or see this region's nucleotide sequence