Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31850 and AZOBR_RS31855 are separated by 42 nucleotides AZOBR_RS31855 and AZOBR_RS31860 are separated by 315 nucleotides
AZOBR_RS31850: AZOBR_RS31850 - hypothetical protein, at 510,348 to 510,653
_RS31850
AZOBR_RS31855: AZOBR_RS31855 - hypothetical protein, at 510,696 to 510,968
_RS31855
AZOBR_RS31860: AZOBR_RS31860 - hypothetical protein, at 511,284 to 512,546
_RS31860
Position (kb) 511
512
513 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 510.438 kb on + strand, within AZOBR_RS31850 at 510.770 kb on - strand, within AZOBR_RS31855 at 510.793 kb on + strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.796 kb on + strand, within AZOBR_RS31855 at 510.797 kb on - strand, within AZOBR_RS31855 at 510.797 kb on - strand, within AZOBR_RS31855 at 510.845 kb on - strand, within AZOBR_RS31855 at 511.071 kb on + strand at 511.072 kb on - strand at 511.226 kb on - strand at 511.359 kb on + strand at 511.359 kb on + strand at 511.468 kb on - strand, within AZOBR_RS31860 at 511.515 kb on + strand, within AZOBR_RS31860 at 511.962 kb on + strand, within AZOBR_RS31860 at 511.963 kb on - strand, within AZOBR_RS31860 at 512.079 kb on + strand, within AZOBR_RS31860 at 512.079 kb on + strand, within AZOBR_RS31860 at 512.145 kb on + strand, within AZOBR_RS31860 at 512.146 kb on - strand, within AZOBR_RS31860 at 512.196 kb on + strand, within AZOBR_RS31860 at 512.197 kb on - strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.479 kb on - strand at 512.479 kb on - strand at 512.738 kb on + strand at 512.738 kb on + strand at 512.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 510,438 + AZOBR_RS31850 0.29 +0.3 510,770 - AZOBR_RS31855 0.27 +2.4 510,793 + AZOBR_RS31855 0.36 -0.9 510,794 - AZOBR_RS31855 0.36 +0.4 510,794 - AZOBR_RS31855 0.36 -0.1 510,794 - AZOBR_RS31855 0.36 +0.5 510,794 - AZOBR_RS31855 0.36 -1.2 510,796 + AZOBR_RS31855 0.37 +2.1 510,797 - AZOBR_RS31855 0.37 +0.8 510,797 - AZOBR_RS31855 0.37 -0.6 510,845 - AZOBR_RS31855 0.55 +0.5 511,071 + -1.4 511,072 - +0.6 511,226 - +0.5 511,359 + +0.7 511,359 + -0.8 511,468 - AZOBR_RS31860 0.15 +1.5 511,515 + AZOBR_RS31860 0.18 +3.1 511,962 + AZOBR_RS31860 0.54 -0.3 511,963 - AZOBR_RS31860 0.54 +1.5 512,079 + AZOBR_RS31860 0.63 -2.7 512,079 + AZOBR_RS31860 0.63 -1.5 512,145 + AZOBR_RS31860 0.68 +1.0 512,146 - AZOBR_RS31860 0.68 +0.2 512,196 + AZOBR_RS31860 0.72 -1.2 512,197 - AZOBR_RS31860 0.72 +1.8 512,241 + AZOBR_RS31860 0.76 -0.9 512,241 + AZOBR_RS31860 0.76 +0.2 512,241 + AZOBR_RS31860 0.76 -0.6 512,242 - AZOBR_RS31860 0.76 -3.1 512,242 - AZOBR_RS31860 0.76 +0.1 512,242 - AZOBR_RS31860 0.76 +0.2 512,242 - AZOBR_RS31860 0.76 +3.0 512,479 - -2.0 512,479 - -1.5 512,738 + +0.7 512,738 + +0.6 512,739 - -2.5
Or see this region's nucleotide sequence