Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31305 and AZOBR_RS31310 are separated by 146 nucleotides AZOBR_RS31310 and AZOBR_RS31315 are separated by 70 nucleotides
AZOBR_RS31305: AZOBR_RS31305 - hypothetical protein, at 390,220 to 390,675
_RS31305
AZOBR_RS31310: AZOBR_RS31310 - transcriptional regulator, at 390,822 to 391,457
_RS31310
AZOBR_RS31315: AZOBR_RS31315 - RND transporter, at 391,528 to 392,724
_RS31315
Position (kb) 390
391
392 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 389.831 kb on + strand at 390.768 kb on + strand at 390.768 kb on + strand at 390.769 kb on - strand at 390.769 kb on - strand at 390.794 kb on - strand at 390.805 kb on - strand at 390.811 kb on + strand at 390.986 kb on - strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.102 kb on - strand, within AZOBR_RS31310 at 391.155 kb on + strand, within AZOBR_RS31310 at 391.156 kb on - strand, within AZOBR_RS31310 at 391.472 kb on - strand at 391.634 kb on + strand at 391.660 kb on + strand, within AZOBR_RS31315 at 391.660 kb on + strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.772 kb on - strand, within AZOBR_RS31315 at 391.772 kb on - strand, within AZOBR_RS31315 at 392.152 kb on + strand, within AZOBR_RS31315 at 392.153 kb on - strand, within AZOBR_RS31315 at 392.153 kb on - strand, within AZOBR_RS31315
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 389,831 + +0.0 390,768 + +0.3 390,768 + -2.0 390,769 - +2.4 390,769 - +2.4 390,794 - +2.9 390,805 - +0.8 390,811 + +0.0 390,986 - AZOBR_RS31310 0.26 +0.1 390,987 + AZOBR_RS31310 0.26 -1.4 390,987 + AZOBR_RS31310 0.26 -1.6 390,987 + AZOBR_RS31310 0.26 -1.1 390,987 + AZOBR_RS31310 0.26 -1.8 390,988 - AZOBR_RS31310 0.26 +0.4 390,988 - AZOBR_RS31310 0.26 -1.6 390,988 - AZOBR_RS31310 0.26 +0.1 391,101 + AZOBR_RS31310 0.44 -1.6 391,101 + AZOBR_RS31310 0.44 -0.4 391,101 + AZOBR_RS31310 0.44 -0.1 391,102 - AZOBR_RS31310 0.44 -0.4 391,155 + AZOBR_RS31310 0.52 -0.1 391,156 - AZOBR_RS31310 0.53 -0.0 391,472 - -1.0 391,634 + +2.4 391,660 + AZOBR_RS31315 0.11 +0.9 391,660 + AZOBR_RS31315 0.11 +0.3 391,661 - AZOBR_RS31315 0.11 -0.4 391,661 - AZOBR_RS31315 0.11 -0.5 391,661 - AZOBR_RS31315 0.11 -1.1 391,771 + AZOBR_RS31315 0.20 +0.4 391,771 + AZOBR_RS31315 0.20 -1.5 391,771 + AZOBR_RS31315 0.20 -1.3 391,772 - AZOBR_RS31315 0.20 -0.3 391,772 - AZOBR_RS31315 0.20 -1.5 392,152 + AZOBR_RS31315 0.52 +2.1 392,153 - AZOBR_RS31315 0.52 +0.1 392,153 - AZOBR_RS31315 0.52 +0.7
Or see this region's nucleotide sequence