Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00020 and ABZR87_RS00025 are separated by 39 nucleotides ABZR87_RS00025 and ABZR87_RS00030 are separated by 39 nucleotides ABZR87_RS00030 and ABZR87_RS00035 are separated by 48 nucleotides ABZR87_RS00035 and ABZR87_RS00040 are separated by 75 nucleotides
ABZR87_RS00020: ABZR87_RS00020 - DUF3460 family protein, at 7,104 to 7,292
_RS00020
ABZR87_RS00025: ABZR87_RS00025 - ScpA family protein, at 7,332 to 8,213
_RS00025
ABZR87_RS00030: ABZR87_RS00030 - pantoate--beta-alanine ligase, at 8,253 to 9,104
_RS00030
ABZR87_RS00035: ABZR87_RS00035 - ParA family protein, at 9,153 to 9,818
_RS00035
ABZR87_RS00040: ABZR87_RS00040 - cobyric acid synthase, at 9,894 to 11,390
_RS00040
Position (kb)
8
9
10 Strain fitness (log2 ratio)
-1
0
1
2 at 7.272 kb on + strand, within ABZR87_RS00020 at 7.272 kb on + strand, within ABZR87_RS00020 at 7.272 kb on + strand, within ABZR87_RS00020 at 7.272 kb on + strand, within ABZR87_RS00020 at 7.272 kb on + strand, within ABZR87_RS00020 at 7.278 kb on + strand at 7.278 kb on + strand at 7.278 kb on + strand at 8.199 kb on + strand at 8.211 kb on + strand at 8.211 kb on + strand at 8.211 kb on + strand at 8.243 kb on + strand at 8.243 kb on + strand at 8.252 kb on + strand at 8.252 kb on + strand at 9.171 kb on - strand at 9.171 kb on - strand at 9.301 kb on + strand, within ABZR87_RS00035 at 9.301 kb on + strand, within ABZR87_RS00035 at 9.301 kb on + strand, within ABZR87_RS00035 at 9.301 kb on + strand, within ABZR87_RS00035 at 9.301 kb on + strand, within ABZR87_RS00035 at 9.301 kb on + strand, within ABZR87_RS00035 at 9.302 kb on - strand, within ABZR87_RS00035 at 9.302 kb on - strand, within ABZR87_RS00035 at 9.302 kb on - strand, within ABZR87_RS00035 at 9.383 kb on + strand, within ABZR87_RS00035 at 9.383 kb on + strand, within ABZR87_RS00035 at 9.384 kb on - strand, within ABZR87_RS00035 at 9.384 kb on - strand, within ABZR87_RS00035 at 9.389 kb on + strand, within ABZR87_RS00035 at 9.520 kb on + strand, within ABZR87_RS00035 at 9.520 kb on + strand, within ABZR87_RS00035 at 9.520 kb on + strand, within ABZR87_RS00035 at 9.520 kb on + strand, within ABZR87_RS00035 at 9.801 kb on + strand at 9.801 kb on + strand at 9.802 kb on - strand at 9.802 kb on - strand at 9.888 kb on + strand at 9.888 kb on + strand at 9.888 kb on + strand at 9.889 kb on - strand at 9.889 kb on - strand at 9.889 kb on - strand at 9.994 kb on + strand at 9.994 kb on + strand at 9.995 kb on - strand at 9.995 kb on - strand at 10.078 kb on + strand, within ABZR87_RS00040 at 10.078 kb on + strand, within ABZR87_RS00040 at 10.079 kb on - strand, within ABZR87_RS00040 at 10.079 kb on - strand, within ABZR87_RS00040
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 7,272 + ABZR87_RS00020 0.89 +1.9 7,272 + ABZR87_RS00020 0.89 +0.1 7,272 + ABZR87_RS00020 0.89 -0.2 7,272 + ABZR87_RS00020 0.89 -0.1 7,272 + ABZR87_RS00020 0.89 +0.5 7,278 + -0.7 7,278 + +0.5 7,278 + +1.1 8,199 + -1.0 8,211 + -0.3 8,211 + -0.6 8,211 + +0.3 8,243 + +1.4 8,243 + -1.3 8,252 + +1.7 8,252 + +1.0 9,171 - -1.1 9,171 - -0.4 9,301 + ABZR87_RS00035 0.22 +0.3 9,301 + ABZR87_RS00035 0.22 +0.3 9,301 + ABZR87_RS00035 0.22 -0.7 9,301 + ABZR87_RS00035 0.22 +0.5 9,301 + ABZR87_RS00035 0.22 +0.5 9,301 + ABZR87_RS00035 0.22 -0.2 9,302 - ABZR87_RS00035 0.22 +0.1 9,302 - ABZR87_RS00035 0.22 +0.4 9,302 - ABZR87_RS00035 0.22 +0.3 9,383 + ABZR87_RS00035 0.35 +0.4 9,383 + ABZR87_RS00035 0.35 +0.8 9,384 - ABZR87_RS00035 0.35 +1.2 9,384 - ABZR87_RS00035 0.35 -0.9 9,389 + ABZR87_RS00035 0.35 +0.0 9,520 + ABZR87_RS00035 0.55 +0.0 9,520 + ABZR87_RS00035 0.55 -0.2 9,520 + ABZR87_RS00035 0.55 +0.2 9,520 + ABZR87_RS00035 0.55 +0.6 9,801 + +1.1 9,801 + -0.6 9,802 - -0.3 9,802 - +0.4 9,888 + -0.1 9,888 + -0.2 9,888 + +0.1 9,889 - -0.3 9,889 - -0.2 9,889 - -0.5 9,994 + +1.2 9,994 + +0.4 9,995 - -0.3 9,995 - -0.2 10,078 + ABZR87_RS00040 0.12 +0.4 10,078 + ABZR87_RS00040 0.12 +1.2 10,079 - ABZR87_RS00040 0.12 +0.0 10,079 - ABZR87_RS00040 0.12 +0.7
Or see this region's nucleotide sequence