Experiment: Varel_Bryant_medium_Glucose with Furaltadone 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0569 and BT0570 are separated by 276 nucleotides BT0570 and BT0571 are separated by 135 nucleotides
BT0569: BT0569 - conserved hypothetical protein (NCBI ptt file), at 704,654 to 705,364
BT0569
BT0570: BT0570 - excinuclease ABC subunit B (NCBI ptt file), at 705,641 to 707,674
BT0570
BT0571: BT0571 - phenylacetate-coenzyme A ligase (NCBI ptt file), at 707,810 to 709,108
BT0571
Position (kb) 705
706
707
708 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 704.657 kb on + strand at 704.658 kb on - strand at 704.760 kb on - strand, within BT0569 at 704.935 kb on - strand, within BT0569 at 704.986 kb on + strand, within BT0569 at 705.026 kb on + strand, within BT0569 at 705.026 kb on + strand, within BT0569 at 705.040 kb on + strand, within BT0569 at 705.040 kb on + strand, within BT0569 at 705.062 kb on - strand, within BT0569 at 705.149 kb on - strand, within BT0569 at 705.190 kb on - strand, within BT0569 at 705.211 kb on + strand, within BT0569 at 705.281 kb on - strand, within BT0569 at 705.294 kb on + strand at 705.319 kb on + strand at 705.439 kb on + strand at 705.627 kb on + strand at 705.789 kb on + strand at 705.790 kb on - strand at 705.837 kb on + strand at 705.838 kb on - strand at 706.136 kb on + strand, within BT0570 at 706.137 kb on - strand, within BT0570 at 706.192 kb on - strand, within BT0570 at 706.192 kb on - strand, within BT0570 at 706.233 kb on - strand, within BT0570 at 706.334 kb on + strand, within BT0570 at 706.407 kb on - strand, within BT0570 at 706.476 kb on - strand, within BT0570 at 706.595 kb on + strand, within BT0570 at 706.629 kb on + strand, within BT0570 at 706.629 kb on + strand, within BT0570 at 706.629 kb on + strand, within BT0570 at 706.806 kb on + strand, within BT0570 at 706.806 kb on + strand, within BT0570 at 706.821 kb on + strand, within BT0570 at 707.245 kb on + strand, within BT0570 at 707.358 kb on + strand, within BT0570 at 707.404 kb on - strand, within BT0570 at 707.418 kb on + strand, within BT0570 at 707.461 kb on - strand, within BT0570 at 707.461 kb on - strand, within BT0570 at 707.462 kb on + strand, within BT0570 at 707.504 kb on - strand at 707.571 kb on - strand at 707.608 kb on + strand at 707.793 kb on - strand at 707.836 kb on + strand at 707.837 kb on - strand at 707.872 kb on - strand at 707.894 kb on + strand at 707.894 kb on + strand at 707.895 kb on - strand at 707.901 kb on - strand at 707.959 kb on + strand, within BT0571 at 708.067 kb on + strand, within BT0571 at 708.111 kb on + strand, within BT0571 at 708.113 kb on + strand, within BT0571 at 708.193 kb on - strand, within BT0571 at 708.206 kb on + strand, within BT0571 at 708.293 kb on - strand, within BT0571 at 708.293 kb on - strand, within BT0571 at 708.311 kb on - strand, within BT0571 at 708.359 kb on + strand, within BT0571 at 708.460 kb on + strand, within BT0571 at 708.505 kb on + strand, within BT0571 at 708.509 kb on + strand, within BT0571 at 708.662 kb on - strand, within BT0571
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Furaltadone 0.05 mM remove 704,657 + -1.5 704,658 - +0.1 704,760 - BT0569 0.15 +0.7 704,935 - BT0569 0.40 -0.9 704,986 + BT0569 0.47 -1.0 705,026 + BT0569 0.52 -2.5 705,026 + BT0569 0.52 -2.9 705,040 + BT0569 0.54 +2.4 705,040 + BT0569 0.54 -1.4 705,062 - BT0569 0.57 -1.7 705,149 - BT0569 0.70 +1.7 705,190 - BT0569 0.75 -1.5 705,211 + BT0569 0.78 +2.7 705,281 - BT0569 0.88 -0.9 705,294 + -0.3 705,319 + +0.1 705,439 + -2.3 705,627 + +1.1 705,789 + -3.4 705,790 - -1.5 705,837 + -3.9 705,838 - -2.7 706,136 + BT0570 0.24 -2.3 706,137 - BT0570 0.24 -4.2 706,192 - BT0570 0.27 -2.7 706,192 - BT0570 0.27 -2.5 706,233 - BT0570 0.29 -1.9 706,334 + BT0570 0.34 -3.1 706,407 - BT0570 0.38 -2.9 706,476 - BT0570 0.41 -2.5 706,595 + BT0570 0.47 -4.3 706,629 + BT0570 0.49 +0.1 706,629 + BT0570 0.49 -2.3 706,629 + BT0570 0.49 -0.9 706,806 + BT0570 0.57 +0.1 706,806 + BT0570 0.57 -1.9 706,821 + BT0570 0.58 -0.9 707,245 + BT0570 0.79 -0.9 707,358 + BT0570 0.84 -3.3 707,404 - BT0570 0.87 -4.2 707,418 + BT0570 0.87 +0.1 707,461 - BT0570 0.89 -2.6 707,461 - BT0570 0.89 +0.1 707,462 + BT0570 0.90 -2.5 707,504 - -2.3 707,571 - +0.1 707,608 + -2.2 707,793 - -1.1 707,836 + -2.5 707,837 - -0.9 707,872 - -0.4 707,894 + -0.5 707,894 + -2.7 707,895 - -0.6 707,901 - -0.2 707,959 + BT0571 0.11 -2.1 708,067 + BT0571 0.20 -1.6 708,111 + BT0571 0.23 -2.7 708,113 + BT0571 0.23 -0.3 708,193 - BT0571 0.29 +0.1 708,206 + BT0571 0.30 +0.1 708,293 - BT0571 0.37 +0.1 708,293 - BT0571 0.37 -1.5 708,311 - BT0571 0.39 -1.3 708,359 + BT0571 0.42 -0.2 708,460 + BT0571 0.50 +0.1 708,505 + BT0571 0.54 +0.1 708,509 + BT0571 0.54 +0.1 708,662 - BT0571 0.66 -0.9
Or see this region's nucleotide sequence