Strain Fitness in Sinorhizobium meliloti 1021 around SMc03846

Experiment: L-Lysine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc03845 and SMc03846 are separated by 242 nucleotidesSMc03846 and SMc03847 are separated by 270 nucleotidesSMc03847 and SMc03848 overlap by 4 nucleotides SMc03845: SMc03845 - hypothetical protein, at 3,509,841 to 3,510,659 SMc03845 SMc03846: SMc03846 - aconitate hydratase, at 3,510,902 to 3,513,592 SMc03846 SMc03847: SMc03847 - cytochrome c biogenesis protein CcmA, at 3,513,863 to 3,514,486 SMc03847 SMc03848: SMc03848 - heme exporter B (cytochrome C-type biogenesis protein) transmembrane, at 3,514,483 to 3,515,142 SMc03848 Position (kb) 3510 3511 3512 3513 3514Strain fitness (log2 ratio) -1 0 1at 3510.768 kb on - strandat 3510.768 kb on - strandat 3510.768 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (C)
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3,510,768 - +0.3
3,510,768 - -0.6
3,510,768 - -0.3

Or see this region's nucleotide sequence