Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00712 and SMc00711 are separated by 31 nucleotides SMc00711 and SMc00710 overlap by 1 nucleotides
SMc00712: SMc00712 - hypothetical protein, at 2,867,926 to 2,868,939
SMc00712
SMc00711: SMc00711 - cyclohexadienyl dehydrogenase, at 2,868,971 to 2,869,894
SMc00711
SMc00710: SMc00710 - histidinol-phosphate aminotransferase, at 2,869,894 to 2,871,000
SMc00710
Position (kb)
2868
2869
2870 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2867.992 kb on - strand at 2868.376 kb on + strand, within SMc00712 at 2868.480 kb on - strand, within SMc00712 at 2868.618 kb on + strand, within SMc00712 at 2868.972 kb on + strand at 2868.972 kb on + strand at 2869.047 kb on - strand at 2869.245 kb on + strand, within SMc00711 at 2869.315 kb on + strand, within SMc00711 at 2869.316 kb on - strand, within SMc00711 at 2869.732 kb on - strand, within SMc00711 at 2869.789 kb on + strand, within SMc00711 at 2869.988 kb on + strand at 2870.031 kb on - strand, within SMc00710 at 2870.031 kb on - strand, within SMc00710 at 2870.031 kb on - strand, within SMc00710 at 2870.031 kb on - strand, within SMc00710 at 2870.291 kb on + strand, within SMc00710 at 2870.292 kb on - strand, within SMc00710 at 2870.292 kb on - strand, within SMc00710 at 2870.324 kb on + strand, within SMc00710 at 2870.324 kb on + strand, within SMc00710 at 2870.324 kb on + strand, within SMc00710 at 2870.325 kb on - strand, within SMc00710 at 2870.325 kb on - strand, within SMc00710 at 2870.393 kb on + strand, within SMc00710 at 2870.393 kb on + strand, within SMc00710 at 2870.393 kb on + strand, within SMc00710 at 2870.393 kb on + strand, within SMc00710 at 2870.412 kb on - strand, within SMc00710 at 2870.412 kb on - strand, within SMc00710 at 2870.412 kb on - strand, within SMc00710 at 2870.493 kb on + strand, within SMc00710 at 2870.493 kb on + strand, within SMc00710 at 2870.495 kb on + strand, within SMc00710 at 2870.495 kb on + strand, within SMc00710 at 2870.495 kb on + strand at 2870.495 kb on + strand, within SMc00710 at 2870.495 kb on + strand, within SMc00710 at 2870.495 kb on + strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.496 kb on - strand, within SMc00710 at 2870.564 kb on - strand, within SMc00710 at 2870.693 kb on + strand, within SMc00710 at 2870.694 kb on - strand, within SMc00710 at 2870.694 kb on - strand, within SMc00710 at 2870.697 kb on + strand, within SMc00710 at 2870.697 kb on + strand, within SMc00710 at 2870.697 kb on + strand, within SMc00710 at 2870.697 kb on + strand, within SMc00710 at 2870.698 kb on - strand, within SMc00710 at 2870.698 kb on - strand, within SMc00710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 2,867,992 - -0.4 2,868,376 + SMc00712 0.44 +0.5 2,868,480 - SMc00712 0.55 +0.0 2,868,618 + SMc00712 0.68 +1.7 2,868,972 + -0.5 2,868,972 + +0.6 2,869,047 - -4.8 2,869,245 + SMc00711 0.30 -3.3 2,869,315 + SMc00711 0.37 -1.9 2,869,316 - SMc00711 0.37 -4.2 2,869,732 - SMc00711 0.82 -2.3 2,869,789 + SMc00711 0.89 -4.4 2,869,988 + -1.1 2,870,031 - SMc00710 0.12 +0.6 2,870,031 - SMc00710 0.12 +0.0 2,870,031 - SMc00710 0.12 -0.3 2,870,031 - SMc00710 0.12 -0.9 2,870,291 + SMc00710 0.36 -1.5 2,870,292 - SMc00710 0.36 -0.8 2,870,292 - SMc00710 0.36 -0.0 2,870,324 + SMc00710 0.39 -1.1 2,870,324 + SMc00710 0.39 -4.5 2,870,324 + SMc00710 0.39 -2.8 2,870,325 - SMc00710 0.39 +0.3 2,870,325 - SMc00710 0.39 -0.0 2,870,393 + SMc00710 0.45 -2.4 2,870,393 + SMc00710 0.45 -0.5 2,870,393 + SMc00710 0.45 -5.2 2,870,393 + SMc00710 0.45 -1.3 2,870,412 - SMc00710 0.47 -1.8 2,870,412 - SMc00710 0.47 -2.1 2,870,412 - SMc00710 0.47 -0.5 2,870,493 + SMc00710 0.54 -1.6 2,870,493 + SMc00710 0.54 -2.7 2,870,495 + SMc00710 0.54 -1.1 2,870,495 + SMc00710 0.54 -1.6 2,870,495 + +1.5 2,870,495 + SMc00710 0.54 -0.8 2,870,495 + SMc00710 0.54 -1.6 2,870,495 + SMc00710 0.54 -3.6 2,870,496 - SMc00710 0.54 +0.1 2,870,496 - SMc00710 0.54 +0.7 2,870,496 - SMc00710 0.54 +0.3 2,870,496 - SMc00710 0.54 -1.5 2,870,496 - SMc00710 0.54 +0.2 2,870,496 - SMc00710 0.54 +0.2 2,870,496 - SMc00710 0.54 -0.9 2,870,496 - SMc00710 0.54 +0.5 2,870,496 - SMc00710 0.54 -0.2 2,870,496 - SMc00710 0.54 -0.4 2,870,496 - SMc00710 0.54 +0.1 2,870,496 - SMc00710 0.54 -0.1 2,870,496 - SMc00710 0.54 -0.3 2,870,496 - SMc00710 0.54 -0.8 2,870,564 - SMc00710 0.61 -0.1 2,870,693 + SMc00710 0.72 -0.5 2,870,694 - SMc00710 0.72 +0.5 2,870,694 - SMc00710 0.72 +1.5 2,870,697 + SMc00710 0.73 -2.8 2,870,697 + SMc00710 0.73 -4.1 2,870,697 + SMc00710 0.73 -0.1 2,870,697 + SMc00710 0.73 -0.8 2,870,698 - SMc00710 0.73 -0.5 2,870,698 - SMc00710 0.73 -0.8
Or see this region's nucleotide sequence