Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02470 and AZOBR_RS02475 are separated by 48 nucleotides
AZOBR_RS02470: AZOBR_RS02470 - esterase, at 512,513 to 513,733
_RS02470
AZOBR_RS02475: AZOBR_RS02475 - heme A synthase, at 513,782 to 514,867
_RS02475
Position (kb) 513
514
515 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.973 kb on - strand, within AZOBR_RS02470 at 513.230 kb on + strand, within AZOBR_RS02470 at 513.383 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand at 513.393 kb on - strand, within AZOBR_RS02470 at 513.393 kb on - strand, within AZOBR_RS02470 at 513.620 kb on - strand at 513.620 kb on - strand at 513.657 kb on - strand at 513.657 kb on - strand at 513.740 kb on + strand at 513.881 kb on + strand at 514.155 kb on + strand, within AZOBR_RS02475 at 514.323 kb on + strand, within AZOBR_RS02475 at 514.323 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.408 kb on - strand, within AZOBR_RS02475 at 514.408 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475 at 514.795 kb on - strand at 515.024 kb on + strand at 515.097 kb on + strand at 515.098 kb on - strand at 515.098 kb on - strand at 515.556 kb on + strand at 515.784 kb on + strand at 515.784 kb on + strand at 515.785 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI remove 512,972 + AZOBR_RS02470 0.38 +1.1 512,972 + AZOBR_RS02470 0.38 +1.0 512,972 + AZOBR_RS02470 0.38 +0.3 512,972 + AZOBR_RS02470 0.38 +0.2 512,973 - AZOBR_RS02470 0.38 -1.7 513,230 + AZOBR_RS02470 0.59 -0.5 513,383 + AZOBR_RS02470 0.71 -0.4 513,392 + AZOBR_RS02470 0.72 -1.8 513,392 + AZOBR_RS02470 0.72 -0.1 513,392 + AZOBR_RS02470 0.72 -1.0 513,392 + +0.8 513,393 - AZOBR_RS02470 0.72 -2.0 513,393 - AZOBR_RS02470 0.72 -0.6 513,620 - -0.1 513,620 - +0.4 513,657 - -1.5 513,657 - -0.4 513,740 + +3.3 513,881 + -1.2 514,155 + AZOBR_RS02475 0.34 -0.7 514,323 + AZOBR_RS02475 0.50 -0.0 514,323 + AZOBR_RS02475 0.50 -0.6 514,407 + AZOBR_RS02475 0.58 -1.8 514,407 + AZOBR_RS02475 0.58 -0.2 514,407 + AZOBR_RS02475 0.58 -2.7 514,408 - AZOBR_RS02475 0.58 -2.2 514,408 - AZOBR_RS02475 0.58 +0.6 514,609 - AZOBR_RS02475 0.76 +1.5 514,609 - AZOBR_RS02475 0.76 +0.0 514,609 - AZOBR_RS02475 0.76 +0.4 514,635 + AZOBR_RS02475 0.79 -0.6 514,635 + AZOBR_RS02475 0.79 -1.5 514,635 + AZOBR_RS02475 0.79 -1.1 514,795 - +2.1 515,024 + +1.5 515,097 + -0.8 515,098 - -2.0 515,098 - -0.3 515,556 + -0.3 515,784 + -2.0 515,784 + -0.4 515,785 - +0.7
Or see this region's nucleotide sequence