Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13600

Experiment: Octanoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Octanoic (C)
2,877,434	+		ABZR87_RS13590	0.32	-0.4
2,877,500	+				-2.6
2,877,501	-				+1.0
2,877,512	+				+1.0
2,877,513	-				+0.6
2,877,557	+				+0.5
2,877,557	+				-1.9
2,877,558	-				-1.0
2,877,616	+				-2.3
2,877,616	+				+1.5
2,877,616	+				+0.2
2,877,617	-				-1.4
2,877,617	-				-0.4
2,877,641	-				-0.2
2,877,705	+				+0.9
2,877,705	+				+0.0
2,877,706	-				+1.8
2,877,706	-				-3.3
2,877,716	+				-2.8
2,877,716	+				-3.8
2,877,717	-				-0.2
2,877,717	-				-2.2
2,877,717	-				-0.0
2,877,738	+				+1.3
2,877,738	+				+0.4
2,877,739	-				-1.3
2,877,755	+				-0.8
2,877,778	-				+1.9
2,877,821	+				+0.6
2,877,866	+		ABZR87_RS13595	0.20	-1.6
2,877,866	+		ABZR87_RS13595	0.20	+0.5
2,877,899	+		ABZR87_RS13595	0.31	-0.2
2,877,899	+		ABZR87_RS13595	0.31	+1.1
2,877,899	+		ABZR87_RS13595	0.31	-3.2
2,877,899	+		ABZR87_RS13595	0.31	+2.2
2,877,900	-		ABZR87_RS13595	0.31	-0.1
2,877,900	-		ABZR87_RS13595	0.31	-1.2
2,877,900	-		ABZR87_RS13595	0.31	-1.1
2,877,900	-		ABZR87_RS13595	0.31	-1.3
2,877,900	-		ABZR87_RS13595	0.31	+0.8
2,877,902	+		ABZR87_RS13595	0.32	+2.0
2,877,902	+		ABZR87_RS13595	0.32	+0.5
2,877,902	+		ABZR87_RS13595	0.32	-0.8
2,877,903	-		ABZR87_RS13595	0.32	+0.9
2,877,903	-		ABZR87_RS13595	0.32	+1.7
2,877,903	-		ABZR87_RS13595	0.32	-0.3
2,877,903	-		ABZR87_RS13595	0.32	-0.0
2,877,903	-		ABZR87_RS13595	0.32	+0.5
2,877,903	-		ABZR87_RS13595	0.32	-0.4
2,877,965	+		ABZR87_RS13595	0.52	-2.0
2,877,995	+		ABZR87_RS13595	0.62	-0.2
2,877,995	+		ABZR87_RS13595	0.62	-1.6
2,877,996	-		ABZR87_RS13595	0.63	+0.7
2,878,031	+		ABZR87_RS13595	0.74	+0.3
2,878,032	-		ABZR87_RS13595	0.75	+2.1
2,878,072	-		ABZR87_RS13595	0.88	-1.0
2,878,076	-		ABZR87_RS13595	0.89	+1.6
2,878,089	+				-0.4
2,878,089	+				-3.9
2,878,089	+				-1.5
2,878,089	+				+1.4
2,878,089	+				+2.2
2,878,090	-				+0.6
2,878,090	-				-1.6
2,878,107	-				-0.6
2,878,124	+				-2.7
2,878,124	+				+2.2
2,878,153	+				-0.5
2,878,153	+				-0.5
2,878,153	+				+0.4
2,878,153	+				-2.3
2,878,154	-				+0.6
2,878,154	-				+1.5
2,878,154	-				+0.1
2,878,154	-				+0.3
2,878,154	-				-0.1
2,878,154	-				-1.2
2,878,154	-				+0.3
2,878,154	-				-2.0
2,878,154	-				+1.6
2,878,157	+				-1.0
2,878,157	+				-0.1
2,878,158	-				-0.6
2,878,158	-				-0.6
2,878,158	-				+1.9
2,878,158	-				+0.6
2,878,158	-				-0.4
2,878,181	+				-1.8
2,878,182	-				+0.2
2,878,189	+				-0.7
2,878,189	+				+2.4
2,878,189	+				-2.0
2,878,189	+				-0.0
2,878,190	-				-1.0
2,878,190	-				+1.0
2,878,208	-				-2.8
2,878,230	+				+0.0
2,878,230	+				-0.7
2,878,230	+				+1.8
2,878,230	+				-0.1
2,878,231	-				-2.1
2,878,251	-				+2.1
2,878,265	+				+1.4
2,878,266	-				-2.1
2,878,266	-				+0.4
2,878,268	+				+2.2
2,878,269	-				-0.1
2,878,269	-				-0.6
2,878,389	+				-1.6
2,878,445	+				-1.0
2,878,445	+				+0.6
2,878,445	+				-2.0
2,878,445	+				-0.9
2,878,446	-				+0.7
2,878,446	-				-0.8
2,878,446	-				+2.2
2,878,446	-				-0.4
2,878,446	-				-2.4
2,878,462	+		ABZR87_RS13600	0.12	-1.6
2,878,463	-		ABZR87_RS13600	0.12	-1.2
2,878,463	-		ABZR87_RS13600	0.12	+0.5
2,878,534	+		ABZR87_RS13600	0.31	+0.4
2,878,534	+		ABZR87_RS13600	0.31	-0.0
2,878,534	+		ABZR87_RS13600	0.31	-2.2
2,878,534	+		ABZR87_RS13600	0.31	+0.1
2,878,535	-		ABZR87_RS13600	0.31	+0.4
2,878,535	-		ABZR87_RS13600	0.31	-2.0
2,878,566	+		ABZR87_RS13600	0.39	-0.6
2,878,577	+		ABZR87_RS13600	0.42	-0.2
2,878,702	+		ABZR87_RS13600	0.75	+0.4
2,878,709	+		ABZR87_RS13600	0.77	-0.1
2,878,710	-		ABZR87_RS13600	0.77	+1.7
2,878,710	-		ABZR87_RS13600	0.77	-0.5
2,878,712	+		ABZR87_RS13600	0.77	-3.1
2,878,712	+		ABZR87_RS13600	0.77	+2.1
2,878,713	-		ABZR87_RS13600	0.78	+1.2
2,878,713	-		ABZR87_RS13600	0.78	+0.0
2,878,713	-		ABZR87_RS13600	0.78	+0.1
2,878,713	-		ABZR87_RS13600	0.78	-1.7
2,878,789	-				+1.2
2,878,797	-				-0.9
2,878,862	+				+0.4
2,878,862	+				+0.5
2,878,863	-				+1.5
2,878,874	+				+1.6
2,878,874	+				-0.3
2,878,874	+				+0.7
2,878,874	+				-2.0
2,878,875	-				-1.3
2,878,875	-				-1.8
2,878,875	-				+0.4
2,879,029	+		ABZR87_RS13605	0.15	+0.9
2,879,063	-		ABZR87_RS13605	0.21	+0.8
2,879,086	+		ABZR87_RS13605	0.25	-1.8
2,879,086	+		ABZR87_RS13605	0.25	-1.2
2,879,086	+		ABZR87_RS13605	0.25	-1.2
2,879,087	-		ABZR87_RS13605	0.25	+1.5
2,879,087	-		ABZR87_RS13605	0.25	+0.2
2,879,087	-		ABZR87_RS13605	0.25	-1.0
2,879,131	+		ABZR87_RS13605	0.34	-0.0
2,879,170	+		ABZR87_RS13605	0.41	-0.2
2,879,171	-		ABZR87_RS13605	0.41	-1.2
2,879,171	-		ABZR87_RS13605	0.41	-1.5
2,879,171	-		ABZR87_RS13605	0.41	+1.3
2,879,171	-		ABZR87_RS13605	0.41	+0.3
2,879,196	+		ABZR87_RS13605	0.45	+0.4
2,879,196	+		ABZR87_RS13605	0.45	+0.4
2,879,196	+		ABZR87_RS13605	0.45	+2.8
2,879,196	+		ABZR87_RS13605	0.45	-3.5
2,879,197	-		ABZR87_RS13605	0.46	-2.5
2,879,464	+				-0.0
2,879,464	+				+0.0
2,879,464	+				+1.5
2,879,465	-				-0.2
2,879,467	+				-0.1
2,879,468	-				-3.2
2,879,490	-				-2.0
2,879,537	+		ABZR87_RS13610	0.21	+0.4
2,879,537	+		ABZR87_RS13610	0.21	+0.5
2,879,538	-		ABZR87_RS13610	0.21	-3.3
2,879,588	+		ABZR87_RS13610	0.43	-1.6
2,879,589	-		ABZR87_RS13610	0.43	-0.2
2,879,609	+		ABZR87_RS13610	0.52	-0.3
2,879,714	+				+0.5
2,879,714	+				+1.6
2,879,715	-				+1.3
2,879,715	-				+0.5
2,879,715	-				+1.5
2,879,733	+				+2.1
2,879,734	-				-3.8
2,879,749	+				-1.1
2,879,750	-				+2.5
2,879,750	-				-0.6
2,879,750	-				-2.2
2,879,750	-				+0.4
2,879,750	-				+1.4
2,879,750	-				+1.0
2,879,764	+				+1.6
2,879,764	+				+0.1
2,879,764	+				-0.4
2,879,765	-				+1.4
2,879,765	-				+1.2
2,879,765	-				-2.6
2,879,765	-				-2.0
2,879,765	-				+0.0
2,879,782	+				-1.0
2,879,783	-				-2.3
2,879,789	+				+0.0
2,879,790	-				+1.8