Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10105 and ABZR87_RS10110 are separated by 5 nucleotides ABZR87_RS10110 and ABZR87_RS10115 are separated by 3 nucleotides ABZR87_RS10115 and ABZR87_RS10120 are separated by 190 nucleotides
ABZR87_RS10105: ABZR87_RS10105 - S49 family peptidase, at 2,147,576 to 2,148,688
_RS10105
ABZR87_RS10110: ABZR87_RS10110 - SAM-dependent methyltransferase, at 2,148,694 to 2,149,425
_RS10110
ABZR87_RS10115: ABZR87_RS10115 - Maf-like protein, at 2,149,429 to 2,150,025
_RS10115
ABZR87_RS10120: ABZR87_RS10120 - YceD family protein, at 2,150,216 to 2,150,752
_RS10120
Position (kb)
2148
2149
2150 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2147.781 kb on + strand, within ABZR87_RS10105 at 2147.782 kb on - strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.869 kb on + strand, within ABZR87_RS10105 at 2147.870 kb on - strand, within ABZR87_RS10105 at 2147.870 kb on - strand, within ABZR87_RS10105 at 2147.870 kb on - strand, within ABZR87_RS10105 at 2147.873 kb on + strand, within ABZR87_RS10105 at 2147.873 kb on + strand, within ABZR87_RS10105 at 2147.874 kb on - strand, within ABZR87_RS10105 at 2147.874 kb on - strand, within ABZR87_RS10105 at 2147.874 kb on - strand, within ABZR87_RS10105 at 2147.874 kb on - strand, within ABZR87_RS10105 at 2148.113 kb on + strand, within ABZR87_RS10105 at 2148.113 kb on + strand, within ABZR87_RS10105 at 2148.113 kb on + strand, within ABZR87_RS10105 at 2148.114 kb on - strand, within ABZR87_RS10105 at 2148.114 kb on - strand, within ABZR87_RS10105 at 2148.131 kb on + strand, within ABZR87_RS10105 at 2148.131 kb on + strand, within ABZR87_RS10105 at 2148.132 kb on - strand, within ABZR87_RS10105 at 2148.132 kb on - strand, within ABZR87_RS10105 at 2148.132 kb on - strand, within ABZR87_RS10105 at 2148.132 kb on - strand, within ABZR87_RS10105 at 2148.167 kb on + strand, within ABZR87_RS10105 at 2148.168 kb on - strand, within ABZR87_RS10105 at 2148.168 kb on - strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.170 kb on + strand, within ABZR87_RS10105 at 2148.171 kb on - strand, within ABZR87_RS10105 at 2148.171 kb on - strand, within ABZR87_RS10105 at 2148.171 kb on - strand, within ABZR87_RS10105 at 2148.171 kb on - strand, within ABZR87_RS10105 at 2148.171 kb on - strand, within ABZR87_RS10105 at 2148.197 kb on + strand, within ABZR87_RS10105 at 2148.197 kb on + strand, within ABZR87_RS10105 at 2148.197 kb on + strand, within ABZR87_RS10105 at 2148.198 kb on - strand, within ABZR87_RS10105 at 2148.198 kb on - strand, within ABZR87_RS10105 at 2148.257 kb on - strand, within ABZR87_RS10105 at 2148.362 kb on + strand, within ABZR87_RS10105 at 2148.569 kb on + strand, within ABZR87_RS10105 at 2148.570 kb on - strand, within ABZR87_RS10105 at 2148.686 kb on + strand at 2148.687 kb on - strand at 2148.774 kb on + strand, within ABZR87_RS10110 at 2148.774 kb on + strand, within ABZR87_RS10110 at 2148.774 kb on + strand, within ABZR87_RS10110 at 2148.774 kb on + strand, within ABZR87_RS10110 at 2148.775 kb on - strand, within ABZR87_RS10110 at 2148.775 kb on - strand, within ABZR87_RS10110 at 2148.789 kb on + strand, within ABZR87_RS10110 at 2148.789 kb on + strand, within ABZR87_RS10110 at 2148.790 kb on - strand, within ABZR87_RS10110 at 2148.790 kb on - strand, within ABZR87_RS10110 at 2148.825 kb on + strand, within ABZR87_RS10110 at 2148.825 kb on + strand, within ABZR87_RS10110 at 2148.826 kb on - strand, within ABZR87_RS10110 at 2148.826 kb on - strand, within ABZR87_RS10110 at 2148.975 kb on - strand, within ABZR87_RS10110 at 2149.057 kb on + strand, within ABZR87_RS10110 at 2149.058 kb on - strand, within ABZR87_RS10110 at 2149.276 kb on + strand, within ABZR87_RS10110 at 2149.314 kb on - strand, within ABZR87_RS10110 at 2149.314 kb on - strand, within ABZR87_RS10110 at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.391 kb on - strand at 2149.391 kb on - strand at 2149.391 kb on - strand at 2149.395 kb on + strand at 2149.395 kb on + strand at 2149.396 kb on - strand at 2149.409 kb on + strand at 2149.409 kb on + strand at 2149.409 kb on + strand at 2149.410 kb on - strand at 2149.410 kb on - strand at 2149.416 kb on + strand at 2149.416 kb on + strand at 2149.417 kb on - strand at 2150.025 kb on - strand at 2150.026 kb on - strand at 2150.026 kb on - strand at 2150.088 kb on + strand at 2150.088 kb on + strand at 2150.089 kb on - strand at 2150.204 kb on + strand at 2150.204 kb on + strand at 2150.204 kb on + strand at 2150.205 kb on - strand at 2150.344 kb on + strand, within ABZR87_RS10120
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 2,147,781 + ABZR87_RS10105 0.18 -0.1 2,147,782 - ABZR87_RS10105 0.19 -0.8 2,147,869 + ABZR87_RS10105 0.26 -0.6 2,147,869 + ABZR87_RS10105 0.26 +1.1 2,147,869 + ABZR87_RS10105 0.26 +0.7 2,147,869 + ABZR87_RS10105 0.26 -0.8 2,147,869 + ABZR87_RS10105 0.26 -1.6 2,147,869 + ABZR87_RS10105 0.26 -3.4 2,147,870 - ABZR87_RS10105 0.26 +0.8 2,147,870 - ABZR87_RS10105 0.26 +0.8 2,147,870 - ABZR87_RS10105 0.26 -2.1 2,147,873 + ABZR87_RS10105 0.27 -0.8 2,147,873 + ABZR87_RS10105 0.27 -2.1 2,147,874 - ABZR87_RS10105 0.27 -0.7 2,147,874 - ABZR87_RS10105 0.27 -2.1 2,147,874 - ABZR87_RS10105 0.27 +1.7 2,147,874 - ABZR87_RS10105 0.27 -2.3 2,148,113 + ABZR87_RS10105 0.48 +1.0 2,148,113 + ABZR87_RS10105 0.48 -0.6 2,148,113 + ABZR87_RS10105 0.48 -1.0 2,148,114 - ABZR87_RS10105 0.48 -3.4 2,148,114 - ABZR87_RS10105 0.48 +0.5 2,148,131 + ABZR87_RS10105 0.50 -1.2 2,148,131 + ABZR87_RS10105 0.50 +0.1 2,148,132 - ABZR87_RS10105 0.50 -2.4 2,148,132 - ABZR87_RS10105 0.50 -1.6 2,148,132 - ABZR87_RS10105 0.50 -2.3 2,148,132 - ABZR87_RS10105 0.50 +1.8 2,148,167 + ABZR87_RS10105 0.53 -1.9 2,148,168 - ABZR87_RS10105 0.53 -1.3 2,148,168 - ABZR87_RS10105 0.53 -0.8 2,148,170 + ABZR87_RS10105 0.53 +0.8 2,148,170 + ABZR87_RS10105 0.53 -2.1 2,148,170 + ABZR87_RS10105 0.53 -2.3 2,148,170 + ABZR87_RS10105 0.53 -2.0 2,148,170 + ABZR87_RS10105 0.53 -1.0 2,148,170 + ABZR87_RS10105 0.53 -3.0 2,148,170 + ABZR87_RS10105 0.53 -0.1 2,148,170 + ABZR87_RS10105 0.53 -1.5 2,148,170 + ABZR87_RS10105 0.53 -1.7 2,148,171 - ABZR87_RS10105 0.53 +0.9 2,148,171 - ABZR87_RS10105 0.53 -0.3 2,148,171 - ABZR87_RS10105 0.53 -1.8 2,148,171 - ABZR87_RS10105 0.53 +1.5 2,148,171 - ABZR87_RS10105 0.53 -0.7 2,148,197 + ABZR87_RS10105 0.56 +0.0 2,148,197 + ABZR87_RS10105 0.56 -3.3 2,148,197 + ABZR87_RS10105 0.56 +0.5 2,148,198 - ABZR87_RS10105 0.56 -1.8 2,148,198 - ABZR87_RS10105 0.56 +1.1 2,148,257 - ABZR87_RS10105 0.61 +1.4 2,148,362 + ABZR87_RS10105 0.71 -3.0 2,148,569 + ABZR87_RS10105 0.89 +0.6 2,148,570 - ABZR87_RS10105 0.89 -1.2 2,148,686 + +0.4 2,148,687 - +1.8 2,148,774 + ABZR87_RS10110 0.11 -1.8 2,148,774 + ABZR87_RS10110 0.11 -2.9 2,148,774 + ABZR87_RS10110 0.11 -0.2 2,148,774 + ABZR87_RS10110 0.11 +0.7 2,148,775 - ABZR87_RS10110 0.11 -0.8 2,148,775 - ABZR87_RS10110 0.11 +2.2 2,148,789 + ABZR87_RS10110 0.13 +0.9 2,148,789 + ABZR87_RS10110 0.13 +2.0 2,148,790 - ABZR87_RS10110 0.13 -1.9 2,148,790 - ABZR87_RS10110 0.13 +2.2 2,148,825 + ABZR87_RS10110 0.18 +1.0 2,148,825 + ABZR87_RS10110 0.18 +3.2 2,148,826 - ABZR87_RS10110 0.18 +1.5 2,148,826 - ABZR87_RS10110 0.18 -3.0 2,148,975 - ABZR87_RS10110 0.38 -0.2 2,149,057 + ABZR87_RS10110 0.50 +0.1 2,149,058 - ABZR87_RS10110 0.50 +3.4 2,149,276 + ABZR87_RS10110 0.80 +0.2 2,149,314 - ABZR87_RS10110 0.85 +1.4 2,149,314 - ABZR87_RS10110 0.85 +1.2 2,149,390 + +1.2 2,149,390 + -0.1 2,149,390 + -0.5 2,149,390 + -2.2 2,149,390 + +1.9 2,149,391 - -0.2 2,149,391 - -3.5 2,149,391 - +0.3 2,149,395 + +0.3 2,149,395 + +0.7 2,149,396 - -0.8 2,149,409 + +2.2 2,149,409 + +0.6 2,149,409 + +1.5 2,149,410 - +0.7 2,149,410 - +0.2 2,149,416 + +0.8 2,149,416 + -0.8 2,149,417 - +1.7 2,150,025 - -0.8 2,150,026 - -4.1 2,150,026 - +1.8 2,150,088 + +0.2 2,150,088 + -2.1 2,150,089 - -1.2 2,150,204 + +0.9 2,150,204 + +2.2 2,150,204 + -1.9 2,150,205 - -1.6 2,150,344 + ABZR87_RS10120 0.24 -2.1
Or see this region's nucleotide sequence