Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06740

Experiment: Octanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS06730 and ABZR87_RS06735 are separated by 148 nucleotidesABZR87_RS06735 and ABZR87_RS06740 are separated by 68 nucleotidesABZR87_RS06740 and ABZR87_RS06745 are separated by 69 nucleotides ABZR87_RS06730: ABZR87_RS06730 - bacterioferritin-associated ferredoxin, at 1,431,055 to 1,431,330 _RS06730 ABZR87_RS06735: ABZR87_RS06735 - bacterioferritin, at 1,431,479 to 1,431,958 _RS06735 ABZR87_RS06740: ABZR87_RS06740 - molybdopterin-synthase adenylyltransferase MoeB, at 1,432,027 to 1,432,776 _RS06740 ABZR87_RS06745: ABZR87_RS06745 - S41 family peptidase, at 1,432,846 to 1,434,462 _RS06745 Position (kb) 1432 1433Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.058 kb on + strandat 1431.059 kb on - strandat 1431.059 kb on - strandat 1431.059 kb on - strandat 1431.066 kb on + strandat 1431.066 kb on + strandat 1431.067 kb on - strandat 1431.067 kb on - strandat 1431.067 kb on - strandat 1431.067 kb on - strandat 1431.067 kb on - strandat 1431.067 kb on - strandat 1431.490 kb on + strandat 1431.490 kb on + strandat 1431.491 kb on - strandat 1431.491 kb on - strandat 1431.507 kb on - strandat 1431.551 kb on + strand, within ABZR87_RS06735at 1431.551 kb on + strand, within ABZR87_RS06735at 1431.551 kb on + strand, within ABZR87_RS06735at 1431.552 kb on - strand, within ABZR87_RS06735at 1431.552 kb on - strand, within ABZR87_RS06735at 1431.552 kb on - strand, within ABZR87_RS06735at 1431.572 kb on + strand, within ABZR87_RS06735at 1431.572 kb on + strand, within ABZR87_RS06735at 1431.572 kb on + strand, within ABZR87_RS06735at 1431.572 kb on + strand, within ABZR87_RS06735at 1431.573 kb on - strand, within ABZR87_RS06735at 1431.573 kb on - strand, within ABZR87_RS06735at 1431.573 kb on - strand, within ABZR87_RS06735at 1431.573 kb on - strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.611 kb on + strand, within ABZR87_RS06735at 1431.612 kb on - strand, within ABZR87_RS06735at 1431.612 kb on - strand, within ABZR87_RS06735at 1431.612 kb on - strand, within ABZR87_RS06735at 1431.612 kb on - strand, within ABZR87_RS06735at 1431.612 kb on - strand, within ABZR87_RS06735at 1431.797 kb on + strand, within ABZR87_RS06735at 1431.797 kb on + strand, within ABZR87_RS06735at 1431.818 kb on + strand, within ABZR87_RS06735at 1431.818 kb on + strand, within ABZR87_RS06735at 1431.818 kb on + strand, within ABZR87_RS06735at 1431.818 kb on + strand, within ABZR87_RS06735at 1431.819 kb on - strand, within ABZR87_RS06735at 1431.819 kb on - strand, within ABZR87_RS06735at 1431.819 kb on - strand, within ABZR87_RS06735at 1431.923 kb on + strandat 1431.923 kb on + strandat 1431.923 kb on + strandat 1431.923 kb on + strandat 1431.923 kb on + strandat 1431.923 kb on + strandat 1431.924 kb on - strandat 1431.924 kb on - strandat 1431.924 kb on - strandat 1431.956 kb on + strandat 1431.956 kb on + strandat 1431.956 kb on + strandat 1431.957 kb on - strandat 1431.957 kb on - strandat 1431.957 kb on - strandat 1432.817 kb on - strandat 1432.817 kb on - strandat 1432.847 kb on + strandat 1432.938 kb on + strandat 1432.938 kb on + strandat 1433.375 kb on + strand, within ABZR87_RS06745at 1433.376 kb on - strand, within ABZR87_RS06745at 1433.376 kb on - strand, within ABZR87_RS06745at 1433.378 kb on + strand, within ABZR87_RS06745at 1433.378 kb on + strand, within ABZR87_RS06745at 1433.378 kb on + strand, within ABZR87_RS06745at 1433.378 kb on + strand, within ABZR87_RS06745at 1433.379 kb on - strand, within ABZR87_RS06745at 1433.379 kb on - strand, within ABZR87_RS06745at 1433.379 kb on - strand, within ABZR87_RS06745at 1433.381 kb on + strand, within ABZR87_RS06745at 1433.381 kb on + strand, within ABZR87_RS06745at 1433.382 kb on - strand, within ABZR87_RS06745at 1433.382 kb on - strand, within ABZR87_RS06745at 1433.528 kb on + strand, within ABZR87_RS06745at 1433.528 kb on + strand, within ABZR87_RS06745at 1433.528 kb on + strand, within ABZR87_RS06745at 1433.529 kb on - strand, within ABZR87_RS06745at 1433.529 kb on - strand, within ABZR87_RS06745at 1433.529 kb on - strand, within ABZR87_RS06745at 1433.529 kb on - strand, within ABZR87_RS06745at 1433.615 kb on + strand, within ABZR87_RS06745at 1433.615 kb on + strand, within ABZR87_RS06745at 1433.637 kb on - strand, within ABZR87_RS06745at 1433.637 kb on - strand, within ABZR87_RS06745at 1433.637 kb on - strand, within ABZR87_RS06745at 1433.637 kb on - strand, within ABZR87_RS06745at 1433.637 kb on - strand, within ABZR87_RS06745

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Per-strain Table

Position Strand Gene LocusTag Fraction Octanoic (C)
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1,431,058 + -1.8
1,431,058 + -0.9
1,431,058 + -0.2
1,431,058 + -2.3
1,431,058 + +1.7
1,431,058 + -1.1
1,431,058 + -1.8
1,431,059 - -0.8
1,431,059 - +2.3
1,431,059 - -3.2
1,431,066 + -1.6
1,431,066 + +0.1
1,431,067 - -0.9
1,431,067 - -1.2
1,431,067 - +1.8
1,431,067 - +1.5
1,431,067 - -0.9
1,431,067 - +0.6
1,431,490 + +1.6
1,431,490 + +1.4
1,431,491 - +0.6
1,431,491 - -2.1
1,431,507 - -2.7
1,431,551 + ABZR87_RS06735 0.15 +0.9
1,431,551 + ABZR87_RS06735 0.15 +2.4
1,431,551 + ABZR87_RS06735 0.15 +3.6
1,431,552 - ABZR87_RS06735 0.15 -2.6
1,431,552 - ABZR87_RS06735 0.15 +2.5
1,431,552 - ABZR87_RS06735 0.15 +2.3
1,431,572 + ABZR87_RS06735 0.19 +3.9
1,431,572 + ABZR87_RS06735 0.19 -0.2
1,431,572 + ABZR87_RS06735 0.19 -0.7
1,431,572 + ABZR87_RS06735 0.19 +2.2
1,431,573 - ABZR87_RS06735 0.20 +0.8
1,431,573 - ABZR87_RS06735 0.20 +1.6
1,431,573 - ABZR87_RS06735 0.20 -0.9
1,431,573 - ABZR87_RS06735 0.20 +1.4
1,431,611 + ABZR87_RS06735 0.28 -2.0
1,431,611 + ABZR87_RS06735 0.28 -0.0
1,431,611 + ABZR87_RS06735 0.28 +1.0
1,431,611 + ABZR87_RS06735 0.28 -0.3
1,431,611 + ABZR87_RS06735 0.28 +0.9
1,431,611 + ABZR87_RS06735 0.28 -1.2
1,431,612 - ABZR87_RS06735 0.28 +0.6
1,431,612 - ABZR87_RS06735 0.28 -0.1
1,431,612 - ABZR87_RS06735 0.28 -0.2
1,431,612 - ABZR87_RS06735 0.28 +1.4
1,431,612 - ABZR87_RS06735 0.28 +0.3
1,431,797 + ABZR87_RS06735 0.66 +0.3
1,431,797 + ABZR87_RS06735 0.66 +0.8
1,431,818 + ABZR87_RS06735 0.71 +0.3
1,431,818 + ABZR87_RS06735 0.71 +1.0
1,431,818 + ABZR87_RS06735 0.71 +1.7
1,431,818 + ABZR87_RS06735 0.71 -1.9
1,431,819 - ABZR87_RS06735 0.71 +0.6
1,431,819 - ABZR87_RS06735 0.71 -3.4
1,431,819 - ABZR87_RS06735 0.71 +1.7
1,431,923 + +0.4
1,431,923 + +0.2
1,431,923 + +1.2
1,431,923 + +0.8
1,431,923 + -0.3
1,431,923 + -3.6
1,431,924 - +0.6
1,431,924 - -2.0
1,431,924 - -0.3
1,431,956 + -0.5
1,431,956 + -0.0
1,431,956 + +0.1
1,431,957 - +1.2
1,431,957 - -1.6
1,431,957 - -2.6
1,432,817 - +1.1
1,432,817 - -2.4
1,432,847 + -2.3
1,432,938 + -0.7
1,432,938 + -2.2
1,433,375 + ABZR87_RS06745 0.33 +0.9
1,433,376 - ABZR87_RS06745 0.33 -3.1
1,433,376 - ABZR87_RS06745 0.33 -0.7
1,433,378 + ABZR87_RS06745 0.33 -0.9
1,433,378 + ABZR87_RS06745 0.33 -0.9
1,433,378 + ABZR87_RS06745 0.33 +1.9
1,433,378 + ABZR87_RS06745 0.33 -1.4
1,433,379 - ABZR87_RS06745 0.33 -1.7
1,433,379 - ABZR87_RS06745 0.33 -0.2
1,433,379 - ABZR87_RS06745 0.33 -0.2
1,433,381 + ABZR87_RS06745 0.33 -0.2
1,433,381 + ABZR87_RS06745 0.33 -1.4
1,433,382 - ABZR87_RS06745 0.33 +0.1
1,433,382 - ABZR87_RS06745 0.33 -0.9
1,433,528 + ABZR87_RS06745 0.42 -1.4
1,433,528 + ABZR87_RS06745 0.42 -0.2
1,433,528 + ABZR87_RS06745 0.42 -1.7
1,433,529 - ABZR87_RS06745 0.42 +0.6
1,433,529 - ABZR87_RS06745 0.42 +0.1
1,433,529 - ABZR87_RS06745 0.42 -0.2
1,433,529 - ABZR87_RS06745 0.42 -0.4
1,433,615 + ABZR87_RS06745 0.48 -0.9
1,433,615 + ABZR87_RS06745 0.48 +0.6
1,433,637 - ABZR87_RS06745 0.49 -1.0
1,433,637 - ABZR87_RS06745 0.49 +1.8
1,433,637 - ABZR87_RS06745 0.49 +0.6
1,433,637 - ABZR87_RS06745 0.49 +1.1
1,433,637 - ABZR87_RS06745 0.49 -0.7

Or see this region's nucleotide sequence