Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS03955

Experiment: Octanoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Octanoic (C)
823,254	+		ABZR87_RS03945	0.83	-0.5
823,254	+		ABZR87_RS03945	0.83	-0.7
823,255	-		ABZR87_RS03945	0.83	+0.2
823,255	-		ABZR87_RS03945	0.83	+0.2
823,255	-		ABZR87_RS03945	0.83	+0.3
823,255	-		ABZR87_RS03945	0.83	+2.0
823,255	-		ABZR87_RS03945	0.83	+1.2
823,255	-		ABZR87_RS03945	0.83	+2.1
823,255	-		ABZR87_RS03945	0.83	+1.5
823,255	-		ABZR87_RS03945	0.83	+2.9
823,255	-		ABZR87_RS03945	0.83	-0.5
823,352	-		ABZR87_RS03945	0.88	+2.8
823,356	+		ABZR87_RS03945	0.88	-1.9
823,357	-		ABZR87_RS03945	0.88	-0.4
823,357	-		ABZR87_RS03945	0.88	+1.7
823,357	-		ABZR87_RS03945	0.88	-0.1
823,357	-		ABZR87_RS03945	0.88	+1.0
823,366	-		ABZR87_RS03945	0.89	-0.2
823,366	-		ABZR87_RS03945	0.89	-0.1
823,438	+				-0.5
823,439	-				+1.3
823,439	-				-2.4
823,439	-				+3.6
823,439	-				-0.7
823,549	+				+0.1
823,549	+				-1.0
823,549	+				+2.2
823,549	+				-2.8
823,549	+				+0.1
823,549	+				-0.8
823,549	+				+1.3
823,549	+				+0.8
823,549	+				+1.0
823,549	+				+0.8
823,550	-				-0.0
823,550	-				+0.2
823,550	-				+0.4
823,664	+				-0.1
823,665	-		ABZR87_RS03950	0.10	-0.1
823,665	-		ABZR87_RS03950	0.10	+0.5
823,665	-		ABZR87_RS03950	0.10	+0.3
823,665	-		ABZR87_RS03950	0.10	-3.6
823,665	-		ABZR87_RS03950	0.10	-2.0
823,665	-		ABZR87_RS03950	0.10	+0.2
823,698	-		ABZR87_RS03950	0.16	-1.2
824,397	+		ABZR87_RS03955	0.22	-0.8
824,397	+		ABZR87_RS03955	0.22	-3.5
824,397	+		ABZR87_RS03955	0.22	-1.2
824,398	-		ABZR87_RS03955	0.22	-3.2
824,398	-		ABZR87_RS03955	0.22	-0.5
824,398	-		ABZR87_RS03955	0.22	-1.7
824,398	-		ABZR87_RS03955	0.22	-0.2
824,445	+		ABZR87_RS03955	0.26	+0.6
824,446	-		ABZR87_RS03955	0.26	-2.8
824,454	+		ABZR87_RS03955	0.27	-1.2
824,454	+		ABZR87_RS03955	0.27	-1.6
824,455	-		ABZR87_RS03955	0.27	-3.0
824,455	-		ABZR87_RS03955	0.27	-1.2
824,455	-		ABZR87_RS03955	0.27	-0.7
824,455	-		ABZR87_RS03955	0.27	-0.1
824,515	+		ABZR87_RS03955	0.32	+0.2
824,515	+		ABZR87_RS03955	0.32	-2.9
824,516	-		ABZR87_RS03955	0.32	-1.1
824,517	+		ABZR87_RS03955	0.32	+2.2
824,517	+		ABZR87_RS03955	0.32	-1.8
824,517	+		ABZR87_RS03955	0.32	-3.5
824,517	+		ABZR87_RS03955	0.32	-3.3
824,517	+		ABZR87_RS03955	0.32	+1.4
824,517	+		ABZR87_RS03955	0.32	+1.9
824,517	+		ABZR87_RS03955	0.32	-2.1
824,518	-		ABZR87_RS03955	0.32	-1.8
824,518	-		ABZR87_RS03955	0.32	-1.7
824,518	-		ABZR87_RS03955	0.32	+0.3
824,613	+		ABZR87_RS03955	0.41	-3.1
824,613	+		ABZR87_RS03955	0.41	+1.2
824,613	+		ABZR87_RS03955	0.41	-3.1
824,613	+		ABZR87_RS03955	0.41	+1.6
824,613	+		ABZR87_RS03955	0.41	-3.1
824,614	-		ABZR87_RS03955	0.41	-1.8
824,614	-		ABZR87_RS03955	0.41	-1.2
824,664	+		ABZR87_RS03955	0.45	-2.4
824,664	+		ABZR87_RS03955	0.45	-1.1
824,664	+		ABZR87_RS03955	0.45	-1.9
824,811	-		ABZR87_RS03955	0.58	-2.6
824,814	+		ABZR87_RS03955	0.59	-2.9
824,814	+		ABZR87_RS03955	0.59	+0.2
824,815	-		ABZR87_RS03955	0.59	-2.8
824,838	+		ABZR87_RS03955	0.61	-0.8
824,838	+		ABZR87_RS03955	0.61	-2.8
824,839	-		ABZR87_RS03955	0.61	+0.2
824,839	-		ABZR87_RS03955	0.61	-2.4
824,839	-		ABZR87_RS03955	0.61	-1.5
824,910	+		ABZR87_RS03955	0.67	-2.2
824,917	-		ABZR87_RS03955	0.68	-1.6
824,917	-		ABZR87_RS03955	0.68	-3.4
824,917	-		ABZR87_RS03955	0.68	-0.4
824,917	-		ABZR87_RS03955	0.68	-1.8
824,931	+		ABZR87_RS03955	0.69	-2.0
824,931	+		ABZR87_RS03955	0.69	-3.1
824,931	+		ABZR87_RS03955	0.69	-1.4
824,931	+		ABZR87_RS03955	0.69	-3.8
824,931	+		ABZR87_RS03955	0.69	-2.0
824,932	-		ABZR87_RS03955	0.69	-2.9
824,932	-		ABZR87_RS03955	0.69	-2.5
824,932	-		ABZR87_RS03955	0.69	-0.6
824,932	-		ABZR87_RS03955	0.69	+0.6
824,932	-		ABZR87_RS03955	0.69	-2.3
824,932	-		ABZR87_RS03955	0.69	-2.2
824,932	-		ABZR87_RS03955	0.69	-1.8
824,938	-		ABZR87_RS03955	0.69	-2.3
825,147	+		ABZR87_RS03955	0.88	-2.7
825,148	-		ABZR87_RS03955	0.88	+0.0
825,148	-		ABZR87_RS03955	0.88	+1.2
825,148	-		ABZR87_RS03955	0.88	-1.0
825,201	+				-2.7
825,201	+				-1.8
825,201	+				+0.6
825,202	-				+1.2
825,202	-				-2.4
825,202	-				-0.5
825,294	+				-2.9
825,294	+				-2.4
825,294	+				-3.0
825,294	+				-0.4
825,294	+				-1.2
825,295	-				-0.4
825,295	-				+1.9
825,426	+		ABZR87_RS03960	0.11	-1.1
825,426	+		ABZR87_RS03960	0.11	-2.5
825,439	+		ABZR87_RS03960	0.12	-3.2
825,825	+		ABZR87_RS03960	0.43	-3.9
825,852	+		ABZR87_RS03960	0.46	-1.7
825,852	+		ABZR87_RS03960	0.46	+1.2
825,852	+		ABZR87_RS03960	0.46	-0.6
825,852	+		ABZR87_RS03960	0.46	-1.1
825,853	-		ABZR87_RS03960	0.46	-2.7
825,853	-		ABZR87_RS03960	0.46	-3.2
825,853	-		ABZR87_RS03960	0.46	-1.6
825,853	-		ABZR87_RS03960	0.46	+0.8
825,853	-		ABZR87_RS03960	0.46	-0.6
825,912	+		ABZR87_RS03960	0.51	+1.2
825,913	-		ABZR87_RS03960	0.51	-2.4
825,949	-		ABZR87_RS03960	0.54	-1.1
825,955	+		ABZR87_RS03960	0.54	-1.6
825,955	+		ABZR87_RS03960	0.54	-2.6
825,996	+		ABZR87_RS03960	0.57	-1.6
825,996	+		ABZR87_RS03960	0.57	-2.8
825,996	+		ABZR87_RS03960	0.57	-2.6
825,996	+		ABZR87_RS03960	0.57	-2.0
825,996	+		ABZR87_RS03960	0.57	-1.6
825,996	+		ABZR87_RS03960	0.57	-0.2
825,996	+		ABZR87_RS03960	0.57	-3.4
825,997	-		ABZR87_RS03960	0.58	+0.9
825,997	-		ABZR87_RS03960	0.58	-1.2
825,997	-		ABZR87_RS03960	0.58	-1.8