Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02040 and ABZR87_RS02045 overlap by 4 nucleotides ABZR87_RS02045 and ABZR87_RS02050 are separated by 54 nucleotides
ABZR87_RS02040: ABZR87_RS02040 - phosphoenolpyruvate--protein phosphotransferase, at 436,422 to 438,971
_RS02040
ABZR87_RS02045: ABZR87_RS02045 - 1-phosphofructokinase, at 438,968 to 439,924
_RS02045
ABZR87_RS02050: ABZR87_RS02050 - fructose-specific PTS transporter subunit EIIC, at 439,979 to 441,694
_RS02050
Position (kb) 438
439
440 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 438.169 kb on - strand, within ABZR87_RS02040 at 438.169 kb on - strand, within ABZR87_RS02040 at 438.178 kb on - strand, within ABZR87_RS02040 at 438.178 kb on - strand, within ABZR87_RS02040 at 438.178 kb on - strand, within ABZR87_RS02040 at 438.606 kb on + strand, within ABZR87_RS02040 at 438.606 kb on + strand, within ABZR87_RS02040 at 438.606 kb on + strand, within ABZR87_RS02040 at 438.606 kb on + strand, within ABZR87_RS02040 at 438.606 kb on + strand, within ABZR87_RS02040 at 438.607 kb on - strand, within ABZR87_RS02040 at 438.799 kb on + strand at 438.799 kb on + strand at 438.799 kb on + strand at 438.800 kb on - strand at 438.800 kb on - strand at 439.421 kb on + strand, within ABZR87_RS02045 at 439.422 kb on - strand, within ABZR87_RS02045 at 439.422 kb on - strand, within ABZR87_RS02045 at 439.422 kb on - strand, within ABZR87_RS02045 at 439.422 kb on - strand, within ABZR87_RS02045 at 439.573 kb on + strand, within ABZR87_RS02045 at 439.573 kb on + strand, within ABZR87_RS02045 at 439.574 kb on - strand, within ABZR87_RS02045 at 439.574 kb on - strand, within ABZR87_RS02045 at 439.574 kb on - strand, within ABZR87_RS02045 at 439.574 kb on - strand, within ABZR87_RS02045 at 439.733 kb on - strand, within ABZR87_RS02045 at 439.733 kb on - strand, within ABZR87_RS02045 at 440.075 kb on + strand at 440.076 kb on - strand at 440.684 kb on + strand, within ABZR87_RS02050 at 440.684 kb on + strand, within ABZR87_RS02050 at 440.684 kb on + strand, within ABZR87_RS02050 at 440.684 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.777 kb on + strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.778 kb on - strand, within ABZR87_RS02050 at 440.876 kb on + strand, within ABZR87_RS02050 at 440.876 kb on + strand, within ABZR87_RS02050 at 440.885 kb on + strand, within ABZR87_RS02050
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 438,169 - ABZR87_RS02040 0.69 -2.4 438,169 - ABZR87_RS02040 0.69 +1.9 438,178 - ABZR87_RS02040 0.69 -0.6 438,178 - ABZR87_RS02040 0.69 -0.6 438,178 - ABZR87_RS02040 0.69 +0.8 438,606 + ABZR87_RS02040 0.86 +1.6 438,606 + ABZR87_RS02040 0.86 +0.7 438,606 + ABZR87_RS02040 0.86 +0.4 438,606 + ABZR87_RS02040 0.86 +2.7 438,606 + ABZR87_RS02040 0.86 +2.4 438,607 - ABZR87_RS02040 0.86 -1.3 438,799 + -1.7 438,799 + +2.2 438,799 + +2.4 438,800 - -0.5 438,800 - +1.5 439,421 + ABZR87_RS02045 0.47 +0.3 439,422 - ABZR87_RS02045 0.47 -1.0 439,422 - ABZR87_RS02045 0.47 -0.4 439,422 - ABZR87_RS02045 0.47 -2.3 439,422 - ABZR87_RS02045 0.47 -2.3 439,573 + ABZR87_RS02045 0.63 -3.0 439,573 + ABZR87_RS02045 0.63 -0.7 439,574 - ABZR87_RS02045 0.63 -2.5 439,574 - ABZR87_RS02045 0.63 -0.0 439,574 - ABZR87_RS02045 0.63 -0.1 439,574 - ABZR87_RS02045 0.63 +0.1 439,733 - ABZR87_RS02045 0.80 -1.7 439,733 - ABZR87_RS02045 0.80 -1.5 440,075 + +1.4 440,076 - -2.5 440,684 + ABZR87_RS02050 0.41 +0.7 440,684 + ABZR87_RS02050 0.41 +2.4 440,684 + ABZR87_RS02050 0.41 +0.8 440,684 + ABZR87_RS02050 0.41 +0.2 440,777 + ABZR87_RS02050 0.47 +1.1 440,777 + ABZR87_RS02050 0.47 +1.3 440,777 + ABZR87_RS02050 0.47 -1.7 440,777 + ABZR87_RS02050 0.47 -2.5 440,777 + ABZR87_RS02050 0.47 +0.6 440,777 + ABZR87_RS02050 0.47 +1.5 440,777 + ABZR87_RS02050 0.47 +0.3 440,777 + ABZR87_RS02050 0.47 -1.2 440,777 + ABZR87_RS02050 0.47 -1.4 440,777 + ABZR87_RS02050 0.47 +1.5 440,777 + ABZR87_RS02050 0.47 -2.5 440,777 + ABZR87_RS02050 0.47 +0.9 440,777 + ABZR87_RS02050 0.47 +0.3 440,778 - ABZR87_RS02050 0.47 +1.3 440,778 - ABZR87_RS02050 0.47 +0.7 440,778 - ABZR87_RS02050 0.47 -0.6 440,778 - ABZR87_RS02050 0.47 -1.2 440,778 - ABZR87_RS02050 0.47 -2.0 440,778 - ABZR87_RS02050 0.47 +1.0 440,778 - ABZR87_RS02050 0.47 +1.5 440,778 - ABZR87_RS02050 0.47 +1.2 440,778 - ABZR87_RS02050 0.47 -2.9 440,778 - ABZR87_RS02050 0.47 -0.6 440,778 - ABZR87_RS02050 0.47 +1.7 440,778 - ABZR87_RS02050 0.47 +2.5 440,778 - ABZR87_RS02050 0.47 +0.1 440,876 + ABZR87_RS02050 0.52 -2.1 440,876 + ABZR87_RS02050 0.52 -0.2 440,885 + ABZR87_RS02050 0.53 -1.3
Or see this region's nucleotide sequence