Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00225 and ABZR87_RS00230 are separated by 21 nucleotides ABZR87_RS00230 and ABZR87_RS00235 are separated by 66 nucleotides ABZR87_RS00235 and ABZR87_RS00240 are separated by 203 nucleotides
ABZR87_RS00225: ABZR87_RS00225 - ABC transporter substrate-binding protein, at 44,469 to 45,638
_RS00225
ABZR87_RS00230: ABZR87_RS00230 - NAD(P)-dependent oxidoreductase, at 45,660 to 46,544
_RS00230
ABZR87_RS00235: ABZR87_RS00235 - tRNA-Leu, at 46,611 to 46,695
_RS00235
ABZR87_RS00240: ABZR87_RS00240 - dihydroxy-acid dehydratase, at 46,899 to 48,758
_RS00240
Position (kb) 45
46
47 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 44.819 kb on + strand, within ABZR87_RS00225 at 44.819 kb on + strand, within ABZR87_RS00225 at 44.969 kb on + strand, within ABZR87_RS00225 at 44.969 kb on + strand, within ABZR87_RS00225 at 44.969 kb on + strand, within ABZR87_RS00225 at 44.979 kb on + strand, within ABZR87_RS00225 at 44.980 kb on - strand, within ABZR87_RS00225 at 45.183 kb on + strand, within ABZR87_RS00225 at 45.184 kb on - strand, within ABZR87_RS00225 at 45.199 kb on - strand, within ABZR87_RS00225 at 45.199 kb on - strand, within ABZR87_RS00225 at 45.260 kb on + strand, within ABZR87_RS00225 at 45.260 kb on + strand, within ABZR87_RS00225 at 45.260 kb on + strand, within ABZR87_RS00225 at 45.260 kb on + strand, within ABZR87_RS00225 at 45.260 kb on + strand, within ABZR87_RS00225 at 45.261 kb on - strand, within ABZR87_RS00225 at 45.261 kb on - strand, within ABZR87_RS00225 at 45.261 kb on - strand, within ABZR87_RS00225 at 45.261 kb on - strand, within ABZR87_RS00225 at 45.261 kb on - strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.359 kb on + strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.360 kb on - strand, within ABZR87_RS00225 at 45.364 kb on - strand, within ABZR87_RS00225 at 45.364 kb on - strand, within ABZR87_RS00225 at 45.622 kb on - strand at 45.622 kb on - strand at 45.747 kb on + strand at 45.747 kb on + strand at 45.747 kb on + strand at 45.747 kb on + strand at 45.747 kb on + strand at 45.748 kb on - strand at 45.748 kb on - strand at 46.248 kb on - strand, within ABZR87_RS00230 at 46.390 kb on + strand, within ABZR87_RS00230 at 46.457 kb on + strand at 46.457 kb on + strand at 46.458 kb on - strand at 46.483 kb on - strand at 46.588 kb on + strand at 46.588 kb on + strand at 46.588 kb on + strand at 46.588 kb on + strand at 46.791 kb on + strand at 46.791 kb on + strand at 46.792 kb on - strand at 46.854 kb on + strand at 46.855 kb on - strand at 46.909 kb on - strand at 46.909 kb on - strand at 46.909 kb on - strand at 47.172 kb on + strand, within ABZR87_RS00240 at 47.172 kb on + strand, within ABZR87_RS00240 at 47.172 kb on + strand, within ABZR87_RS00240 at 47.172 kb on + strand, within ABZR87_RS00240 at 47.173 kb on - strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.214 kb on + strand, within ABZR87_RS00240 at 47.215 kb on - strand, within ABZR87_RS00240 at 47.215 kb on - strand, within ABZR87_RS00240 at 47.282 kb on + strand, within ABZR87_RS00240 at 47.283 kb on - strand, within ABZR87_RS00240 at 47.287 kb on + strand, within ABZR87_RS00240 at 47.287 kb on + strand, within ABZR87_RS00240 at 47.287 kb on + strand, within ABZR87_RS00240 at 47.287 kb on - strand, within ABZR87_RS00240 at 47.288 kb on - strand, within ABZR87_RS00240 at 47.442 kb on + strand, within ABZR87_RS00240 at 47.442 kb on + strand, within ABZR87_RS00240 at 47.442 kb on + strand, within ABZR87_RS00240 at 47.443 kb on - strand, within ABZR87_RS00240 at 47.443 kb on - strand, within ABZR87_RS00240
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 44,819 + ABZR87_RS00225 0.30 -2.1 44,819 + ABZR87_RS00225 0.30 +0.1 44,969 + ABZR87_RS00225 0.43 +1.0 44,969 + ABZR87_RS00225 0.43 +1.6 44,969 + ABZR87_RS00225 0.43 +1.8 44,979 + ABZR87_RS00225 0.44 +0.6 44,980 - ABZR87_RS00225 0.44 -1.2 45,183 + ABZR87_RS00225 0.61 -1.4 45,184 - ABZR87_RS00225 0.61 +0.1 45,199 - ABZR87_RS00225 0.62 +0.9 45,199 - ABZR87_RS00225 0.62 +2.4 45,260 + ABZR87_RS00225 0.68 -0.2 45,260 + ABZR87_RS00225 0.68 -2.0 45,260 + ABZR87_RS00225 0.68 +1.8 45,260 + ABZR87_RS00225 0.68 -0.9 45,260 + ABZR87_RS00225 0.68 +1.6 45,261 - ABZR87_RS00225 0.68 +1.5 45,261 - ABZR87_RS00225 0.68 -0.5 45,261 - ABZR87_RS00225 0.68 -0.5 45,261 - ABZR87_RS00225 0.68 -0.1 45,261 - ABZR87_RS00225 0.68 -1.6 45,359 + ABZR87_RS00225 0.76 -2.7 45,359 + ABZR87_RS00225 0.76 -1.1 45,359 + ABZR87_RS00225 0.76 -0.6 45,359 + ABZR87_RS00225 0.76 -0.6 45,359 + ABZR87_RS00225 0.76 +1.1 45,359 + ABZR87_RS00225 0.76 -0.7 45,359 + ABZR87_RS00225 0.76 +0.4 45,359 + ABZR87_RS00225 0.76 +1.5 45,360 - ABZR87_RS00225 0.76 -0.1 45,360 - ABZR87_RS00225 0.76 -2.6 45,360 - ABZR87_RS00225 0.76 -0.1 45,360 - ABZR87_RS00225 0.76 +1.8 45,360 - ABZR87_RS00225 0.76 +1.0 45,360 - ABZR87_RS00225 0.76 -0.5 45,360 - ABZR87_RS00225 0.76 -0.5 45,360 - ABZR87_RS00225 0.76 -0.6 45,360 - ABZR87_RS00225 0.76 +2.0 45,360 - ABZR87_RS00225 0.76 +1.4 45,364 - ABZR87_RS00225 0.76 +1.5 45,364 - ABZR87_RS00225 0.76 +2.5 45,622 - +0.6 45,622 - +1.5 45,747 + -0.1 45,747 + +1.7 45,747 + -0.4 45,747 + -2.2 45,747 + -2.6 45,748 - +0.6 45,748 - -0.1 46,248 - ABZR87_RS00230 0.66 -0.7 46,390 + ABZR87_RS00230 0.82 +0.7 46,457 + +1.2 46,457 + +3.3 46,458 - +1.8 46,483 - +0.8 46,588 + -0.9 46,588 + +1.9 46,588 + +1.2 46,588 + +0.8 46,791 + -0.3 46,791 + -2.9 46,792 - -1.3 46,854 + +0.0 46,855 - +2.0 46,909 - -1.9 46,909 - +1.7 46,909 - -0.4 47,172 + ABZR87_RS00240 0.15 -0.1 47,172 + ABZR87_RS00240 0.15 +2.0 47,172 + ABZR87_RS00240 0.15 -0.0 47,172 + ABZR87_RS00240 0.15 -2.2 47,173 - ABZR87_RS00240 0.15 -2.0 47,214 + ABZR87_RS00240 0.17 +0.5 47,214 + ABZR87_RS00240 0.17 -2.7 47,214 + ABZR87_RS00240 0.17 +0.6 47,214 + ABZR87_RS00240 0.17 -1.2 47,214 + ABZR87_RS00240 0.17 +0.7 47,214 + ABZR87_RS00240 0.17 -0.4 47,214 + ABZR87_RS00240 0.17 -0.2 47,214 + ABZR87_RS00240 0.17 -0.2 47,214 + ABZR87_RS00240 0.17 -1.7 47,215 - ABZR87_RS00240 0.17 -1.5 47,215 - ABZR87_RS00240 0.17 +2.9 47,282 + ABZR87_RS00240 0.21 +0.7 47,283 - ABZR87_RS00240 0.21 +1.4 47,287 + ABZR87_RS00240 0.21 -1.6 47,287 + ABZR87_RS00240 0.21 -1.0 47,287 + ABZR87_RS00240 0.21 +1.8 47,287 - ABZR87_RS00240 0.21 -0.3 47,288 - ABZR87_RS00240 0.21 -1.0 47,442 + ABZR87_RS00240 0.29 -0.2 47,442 + ABZR87_RS00240 0.29 -0.5 47,442 + ABZR87_RS00240 0.29 +0.1 47,443 - ABZR87_RS00240 0.29 -1.5 47,443 - ABZR87_RS00240 0.29 +0.9
Or see this region's nucleotide sequence