Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02771 and SMc02770 are separated by 267 nucleotides SMc02770 and SMc02769 are separated by 149 nucleotides SMc02769 and SMc02768 are separated by 98 nucleotides
SMc02771: SMc02771 - zinc-type alcohol dehydrogenase, at 23,151 to 24,167
SMc02771
SMc02770: SMc02770 - hypothetical protein, at 24,435 to 25,709
SMc02770
SMc02769: SMc02769 - hypothetical protein, at 25,859 to 26,284
SMc02769
SMc02768: SMc02768 - hypothetical protein, at 26,383 to 27,138
SMc02768
Position (kb) 24
25
26 Strain fitness (log2 ratio) -2
-1
0
1
2 at 23.647 kb on + strand, within SMc02771 at 23.647 kb on + strand, within SMc02771 at 23.647 kb on + strand, within SMc02771 at 23.648 kb on - strand, within SMc02771 at 23.648 kb on - strand, within SMc02771 at 23.648 kb on - strand, within SMc02771 at 23.648 kb on - strand, within SMc02771 at 23.707 kb on + strand, within SMc02771 at 23.707 kb on + strand, within SMc02771 at 23.708 kb on - strand, within SMc02771 at 23.708 kb on - strand, within SMc02771 at 23.708 kb on - strand, within SMc02771 at 23.708 kb on - strand, within SMc02771 at 23.708 kb on - strand, within SMc02771 at 24.242 kb on - strand at 24.247 kb on - strand at 24.247 kb on - strand at 24.247 kb on - strand at 24.247 kb on - strand at 24.331 kb on - strand at 24.354 kb on + strand at 24.546 kb on + strand at 24.546 kb on + strand at 24.547 kb on - strand at 24.604 kb on - strand, within SMc02770 at 24.704 kb on - strand, within SMc02770 at 24.780 kb on + strand, within SMc02770 at 24.781 kb on - strand, within SMc02770 at 24.834 kb on + strand, within SMc02770 at 24.834 kb on + strand, within SMc02770 at 24.834 kb on + strand, within SMc02770 at 24.834 kb on + strand, within SMc02770 at 24.834 kb on + strand, within SMc02770 at 24.900 kb on + strand, within SMc02770 at 24.900 kb on + strand, within SMc02770 at 24.900 kb on + strand, within SMc02770 at 24.900 kb on + strand, within SMc02770 at 24.901 kb on - strand, within SMc02770 at 24.902 kb on + strand, within SMc02770 at 24.910 kb on - strand, within SMc02770 at 25.354 kb on - strand, within SMc02770 at 25.547 kb on + strand, within SMc02770 at 25.547 kb on + strand, within SMc02770 at 25.548 kb on - strand, within SMc02770 at 25.560 kb on + strand, within SMc02770 at 25.560 kb on + strand, within SMc02770 at 25.560 kb on + strand, within SMc02770 at 25.560 kb on + strand, within SMc02770 at 25.561 kb on - strand, within SMc02770 at 25.770 kb on + strand at 25.771 kb on - strand at 25.771 kb on - strand at 25.950 kb on + strand, within SMc02769 at 25.951 kb on - strand, within SMc02769 at 25.951 kb on - strand, within SMc02769 at 25.965 kb on - strand, within SMc02769 at 26.077 kb on + strand, within SMc02769 at 26.078 kb on - strand, within SMc02769 at 26.177 kb on + strand, within SMc02769 at 26.178 kb on - strand, within SMc02769 at 26.178 kb on - strand, within SMc02769 at 26.181 kb on + strand, within SMc02769 at 26.182 kb on - strand, within SMc02769 at 26.182 kb on - strand, within SMc02769 at 26.182 kb on - strand, within SMc02769 at 26.182 kb on - strand, within SMc02769 at 26.182 kb on - strand, within SMc02769 at 26.336 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 23,647 + SMc02771 0.49 -0.6 23,647 + SMc02771 0.49 +0.5 23,647 + SMc02771 0.49 +0.1 23,648 - SMc02771 0.49 +0.6 23,648 - SMc02771 0.49 +0.5 23,648 - SMc02771 0.49 -0.6 23,648 - SMc02771 0.49 -0.5 23,707 + SMc02771 0.55 -0.4 23,707 + SMc02771 0.55 +0.3 23,708 - SMc02771 0.55 +0.7 23,708 - SMc02771 0.55 +0.5 23,708 - SMc02771 0.55 -0.1 23,708 - SMc02771 0.55 -0.4 23,708 - SMc02771 0.55 -0.1 24,242 - +0.6 24,247 - +1.7 24,247 - -0.7 24,247 - -1.6 24,247 - -0.2 24,331 - +0.2 24,354 + +0.4 24,546 + -0.2 24,546 + +1.8 24,547 - -0.8 24,604 - SMc02770 0.13 +0.8 24,704 - SMc02770 0.21 +0.2 24,780 + SMc02770 0.27 +1.0 24,781 - SMc02770 0.27 +0.3 24,834 + SMc02770 0.31 +0.4 24,834 + SMc02770 0.31 -1.8 24,834 + SMc02770 0.31 +0.8 24,834 + SMc02770 0.31 +0.4 24,834 + SMc02770 0.31 +0.3 24,900 + SMc02770 0.36 +1.4 24,900 + SMc02770 0.36 +0.2 24,900 + SMc02770 0.36 -0.2 24,900 + SMc02770 0.36 +0.0 24,901 - SMc02770 0.37 +0.3 24,902 + SMc02770 0.37 +0.3 24,910 - SMc02770 0.37 +1.8 25,354 - SMc02770 0.72 +0.6 25,547 + SMc02770 0.87 -1.5 25,547 + SMc02770 0.87 +0.1 25,548 - SMc02770 0.87 +0.3 25,560 + SMc02770 0.88 +0.2 25,560 + SMc02770 0.88 +2.5 25,560 + SMc02770 0.88 +0.5 25,560 + SMc02770 0.88 +0.2 25,561 - SMc02770 0.88 -0.5 25,770 + -0.1 25,771 - +0.3 25,771 - -0.3 25,950 + SMc02769 0.21 +0.1 25,951 - SMc02769 0.22 +1.8 25,951 - SMc02769 0.22 +0.6 25,965 - SMc02769 0.25 -0.0 26,077 + SMc02769 0.51 -0.4 26,078 - SMc02769 0.51 -0.3 26,177 + SMc02769 0.75 -0.9 26,178 - SMc02769 0.75 -0.6 26,178 - SMc02769 0.75 +0.8 26,181 + SMc02769 0.76 -0.5 26,182 - SMc02769 0.76 +0.7 26,182 - SMc02769 0.76 +0.4 26,182 - SMc02769 0.76 +0.0 26,182 - SMc02769 0.76 -0.7 26,182 - SMc02769 0.76 -1.2 26,336 + -0.2
Or see this region's nucleotide sequence