Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20745 and SM_b20746 are separated by 563 nucleotides SM_b20746 and SM_b20747 are separated by 19 nucleotides SM_b20747 and SM_b20748 are separated by 151 nucleotides
SM_b20745: SM_b20745 - glutatmine synthetase II protein, at 1,533,876 to 1,534,910
_b20745
SM_b20746: SM_b20746 - hypothetical protein, at 1,535,474 to 1,535,659
_b20746
SM_b20747: SM_b20747 - hypothetical protein, at 1,535,679 to 1,536,353
_b20747
SM_b20748: SM_b20748 - glycosyltransferase, at 1,536,505 to 1,537,569
_b20748
Position (kb)
1535
1536
1537 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1534.888 kb on + strand at 1534.888 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.901 kb on - strand at 1534.925 kb on - strand at 1535.054 kb on + strand at 1535.054 kb on + strand at 1535.346 kb on + strand at 1535.347 kb on - strand at 1535.347 kb on - strand at 1535.347 kb on - strand at 1535.440 kb on + strand at 1535.441 kb on - strand at 1535.441 kb on - strand at 1535.441 kb on - strand at 1535.622 kb on - strand, within SM_b20746 at 1535.670 kb on + strand at 1535.840 kb on + strand, within SM_b20747 at 1535.840 kb on + strand, within SM_b20747 at 1535.841 kb on - strand, within SM_b20747 at 1535.926 kb on + strand, within SM_b20747 at 1535.926 kb on + strand, within SM_b20747 at 1535.927 kb on - strand, within SM_b20747 at 1535.927 kb on - strand, within SM_b20747 at 1535.958 kb on + strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.060 kb on + strand, within SM_b20747 at 1536.061 kb on - strand, within SM_b20747 at 1536.061 kb on - strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.113 kb on - strand, within SM_b20747 at 1536.460 kb on + strand at 1536.461 kb on - strand at 1536.817 kb on + strand, within SM_b20748 at 1536.981 kb on - strand, within SM_b20748 at 1537.004 kb on + strand, within SM_b20748 at 1537.005 kb on - strand, within SM_b20748 at 1537.103 kb on + strand, within SM_b20748 at 1537.275 kb on - strand, within SM_b20748 at 1537.280 kb on + strand, within SM_b20748 at 1537.280 kb on + strand, within SM_b20748 at 1537.281 kb on - strand, within SM_b20748 at 1537.281 kb on - strand, within SM_b20748
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 1,534,888 + +2.1 1,534,888 + +0.5 1,534,900 + +0.4 1,534,900 + -0.0 1,534,900 + -1.0 1,534,900 + -0.3 1,534,900 + +0.0 1,534,901 - +1.8 1,534,925 - -0.3 1,535,054 + +1.8 1,535,054 + +0.2 1,535,346 + -0.2 1,535,347 - +1.1 1,535,347 - -0.6 1,535,347 - -0.9 1,535,440 + -0.6 1,535,441 - -0.0 1,535,441 - -0.1 1,535,441 - -0.0 1,535,622 - SM_b20746 0.80 -1.8 1,535,670 + -0.5 1,535,840 + SM_b20747 0.24 +0.6 1,535,840 + SM_b20747 0.24 -0.7 1,535,841 - SM_b20747 0.24 -0.6 1,535,926 + SM_b20747 0.37 +0.3 1,535,926 + SM_b20747 0.37 +0.4 1,535,927 - SM_b20747 0.37 +1.1 1,535,927 - SM_b20747 0.37 -0.4 1,535,958 + SM_b20747 0.41 -0.1 1,536,032 - SM_b20747 0.52 -0.4 1,536,032 - SM_b20747 0.52 +0.2 1,536,032 - SM_b20747 0.52 +0.2 1,536,060 + SM_b20747 0.56 -0.1 1,536,061 - SM_b20747 0.57 +0.4 1,536,061 - SM_b20747 0.57 -0.2 1,536,090 + SM_b20747 0.61 +0.1 1,536,090 + SM_b20747 0.61 -1.2 1,536,090 + SM_b20747 0.61 +1.6 1,536,090 + SM_b20747 0.61 -0.5 1,536,090 + SM_b20747 0.61 -0.2 1,536,090 + SM_b20747 0.61 -0.1 1,536,090 + SM_b20747 0.61 -0.1 1,536,091 - SM_b20747 0.61 -0.5 1,536,091 - SM_b20747 0.61 -0.6 1,536,091 - SM_b20747 0.61 -0.8 1,536,091 - SM_b20747 0.61 +1.2 1,536,091 - SM_b20747 0.61 +0.1 1,536,091 - SM_b20747 0.61 +1.1 1,536,092 + SM_b20747 0.61 +0.4 1,536,092 + SM_b20747 0.61 +0.5 1,536,092 + SM_b20747 0.61 -0.6 1,536,092 + SM_b20747 0.61 -0.4 1,536,092 + SM_b20747 0.61 -0.9 1,536,092 + SM_b20747 0.61 -0.4 1,536,092 + SM_b20747 0.61 -0.6 1,536,093 - SM_b20747 0.61 +0.1 1,536,093 - SM_b20747 0.61 -1.2 1,536,093 - SM_b20747 0.61 -0.9 1,536,113 - SM_b20747 0.64 -1.1 1,536,460 + -0.6 1,536,461 - +0.2 1,536,817 + SM_b20748 0.29 +0.0 1,536,981 - SM_b20748 0.45 -0.9 1,537,004 + SM_b20748 0.47 +0.4 1,537,005 - SM_b20748 0.47 -0.2 1,537,103 + SM_b20748 0.56 +0.1 1,537,275 - SM_b20748 0.72 -0.8 1,537,280 + SM_b20748 0.73 +0.2 1,537,280 + SM_b20748 0.73 -0.4 1,537,281 - SM_b20748 0.73 -0.2 1,537,281 - SM_b20748 0.73 +3.0
Or see this region's nucleotide sequence