Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20710 and SM_b20711 are separated by 202 nucleotides SM_b20711 and SM_b20712 are separated by 239 nucleotides
SM_b20710: SM_b20710 - dehydrogenase, at 1,512,188 to 1,513,075
_b20710
SM_b20711: SM_b20711 - hypothetical protein, at 1,513,278 to 1,514,090
_b20711
SM_b20712: SM_b20712 - rhizopine uptake ABC transporter substrate-binding protein precursor, at 1,514,330 to 1,515,259
_b20712
Position (kb)
1513
1514
1515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1512.535 kb on + strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.723 kb on + strand, within SM_b20710 at 1512.724 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.936 kb on - strand, within SM_b20710 at 1513.025 kb on + strand at 1513.026 kb on - strand at 1513.033 kb on + strand at 1513.034 kb on - strand at 1513.034 kb on - strand at 1513.307 kb on + strand at 1513.307 kb on + strand at 1513.308 kb on - strand at 1513.308 kb on - strand at 1513.635 kb on - strand, within SM_b20711 at 1513.983 kb on + strand, within SM_b20711 at 1514.070 kb on + strand at 1514.070 kb on + strand at 1514.070 kb on + strand at 1514.463 kb on - strand, within SM_b20712 at 1514.463 kb on - strand, within SM_b20712 at 1514.463 kb on - strand, within SM_b20712 at 1514.648 kb on + strand, within SM_b20712 at 1514.648 kb on + strand, within SM_b20712 at 1514.649 kb on - strand, within SM_b20712 at 1514.649 kb on - strand, within SM_b20712 at 1514.677 kb on + strand, within SM_b20712 at 1514.678 kb on - strand, within SM_b20712 at 1514.753 kb on - strand, within SM_b20712 at 1514.753 kb on - strand, within SM_b20712
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 1,512,535 + SM_b20710 0.39 -0.0 1,512,536 - SM_b20710 0.39 +0.1 1,512,536 - SM_b20710 0.39 -0.1 1,512,536 - SM_b20710 0.39 +0.4 1,512,723 + SM_b20710 0.60 +0.5 1,512,724 - SM_b20710 0.60 +0.8 1,512,840 - SM_b20710 0.73 +0.2 1,512,840 - SM_b20710 0.73 -2.0 1,512,923 + SM_b20710 0.83 -2.3 1,512,923 + SM_b20710 0.83 -0.0 1,512,923 + SM_b20710 0.83 -0.2 1,512,923 + SM_b20710 0.83 -0.3 1,512,936 - SM_b20710 0.84 -1.3 1,513,025 + -0.3 1,513,026 - -0.1 1,513,033 + +0.3 1,513,034 - +0.0 1,513,034 - -0.3 1,513,307 + -0.6 1,513,307 + +0.9 1,513,308 - -0.3 1,513,308 - +0.1 1,513,635 - SM_b20711 0.44 +0.0 1,513,983 + SM_b20711 0.87 +0.8 1,514,070 + -0.3 1,514,070 + +0.2 1,514,070 + -0.4 1,514,463 - SM_b20712 0.14 -0.2 1,514,463 - SM_b20712 0.14 -1.2 1,514,463 - SM_b20712 0.14 +2.6 1,514,648 + SM_b20712 0.34 -0.8 1,514,648 + SM_b20712 0.34 +0.2 1,514,649 - SM_b20712 0.34 -0.3 1,514,649 - SM_b20712 0.34 -2.3 1,514,677 + SM_b20712 0.37 +0.6 1,514,678 - SM_b20712 0.37 +0.5 1,514,753 - SM_b20712 0.45 -0.4 1,514,753 - SM_b20712 0.45 +0.6
Or see this region's nucleotide sequence