Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS30105

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt AZOBR_RS30105: AZOBR_RS30105 - hypothetical protein, at 93,752 to 94,092 _RS30105 Position (kb) 93 94 95Strain fitness (log2 ratio) -2 -1 0 1 2at 93.174 kb on - strandat 93.177 kb on + strandat 93.178 kb on + strandat 93.179 kb on - strandat 93.261 kb on + strandat 93.262 kb on - strandat 93.383 kb on + strandat 93.384 kb on - strandat 93.384 kb on - strandat 93.720 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI
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93,174 - -1.0
93,177 + -0.9
93,178 + -0.4
93,179 - +0.2
93,261 + -0.9
93,262 - -1.0
93,383 + -1.9
93,384 - +2.6
93,384 - -0.9
93,720 - +0.6

Or see this region's nucleotide sequence