Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00765 and AZOBR_RS00770 are separated by 204 nucleotides AZOBR_RS00770 and AZOBR_RS00775 are separated by 0 nucleotides AZOBR_RS00775 and AZOBR_RS00780 are separated by 220 nucleotides
AZOBR_RS00765: AZOBR_RS00765 - hypothetical protein, at 150,294 to 150,647
_RS00765
AZOBR_RS00770: AZOBR_RS00770 - rhodanese, at 150,852 to 151,259
_RS00770
AZOBR_RS00775: AZOBR_RS00775 - glyoxalase, at 151,260 to 151,694
_RS00775
AZOBR_RS00780: AZOBR_RS00780 - putative methyl-accepting chemotaxis protein, at 151,915 to 153,585
_RS00780
Position (kb) 151
152 Strain fitness (log2 ratio) -1
0
1 at 150.458 kb on - strand, within AZOBR_RS00765 at 150.492 kb on - strand, within AZOBR_RS00765 at 150.601 kb on + strand, within AZOBR_RS00765 at 151.104 kb on + strand, within AZOBR_RS00770 at 151.104 kb on + strand, within AZOBR_RS00770 at 151.105 kb on - strand, within AZOBR_RS00770 at 151.324 kb on - strand, within AZOBR_RS00775 at 151.380 kb on + strand, within AZOBR_RS00775 at 151.381 kb on - strand, within AZOBR_RS00775 at 151.381 kb on - strand, within AZOBR_RS00775 at 151.381 kb on - strand, within AZOBR_RS00775 at 151.593 kb on + strand, within AZOBR_RS00775 at 151.921 kb on - strand at 152.431 kb on + strand, within AZOBR_RS00780 at 152.431 kb on + strand, within AZOBR_RS00780 at 152.432 kb on - strand, within AZOBR_RS00780 at 152.452 kb on + strand, within AZOBR_RS00780 at 152.453 kb on - strand, within AZOBR_RS00780 at 152.453 kb on - strand, within AZOBR_RS00780
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI remove 150,458 - AZOBR_RS00765 0.46 +1.6 150,492 - AZOBR_RS00765 0.56 +0.0 150,601 + AZOBR_RS00765 0.87 -0.3 151,104 + AZOBR_RS00770 0.62 +0.8 151,104 + AZOBR_RS00770 0.62 +0.5 151,105 - AZOBR_RS00770 0.62 -0.1 151,324 - AZOBR_RS00775 0.15 +1.2 151,380 + AZOBR_RS00775 0.28 +0.1 151,381 - AZOBR_RS00775 0.28 +0.2 151,381 - AZOBR_RS00775 0.28 +0.2 151,381 - AZOBR_RS00775 0.28 +0.2 151,593 + AZOBR_RS00775 0.77 -0.8 151,921 - -0.6 152,431 + AZOBR_RS00780 0.31 -0.8 152,431 + AZOBR_RS00780 0.31 +1.1 152,432 - AZOBR_RS00780 0.31 +1.0 152,452 + AZOBR_RS00780 0.32 -0.2 152,453 - AZOBR_RS00780 0.32 -0.1 152,453 - AZOBR_RS00780 0.32 +0.0
Or see this region's nucleotide sequence