Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS21755 and ABZR87_RS21760 overlap by 20 nucleotides ABZR87_RS21760 and ABZR87_RS21765 are separated by 698 nucleotides
ABZR87_RS21755: ABZR87_RS21755 - ATP-binding cassette domain-containing protein, at 1,265,356 to 1,266,492
_RS21755
ABZR87_RS21760: ABZR87_RS21760 - methionine ABC transporter permease, at 1,266,473 to 1,267,126
_RS21760
ABZR87_RS21765: ABZR87_RS21765 - family 2A encapsulin nanocompartment cargo protein cysteine desulfurase, at 1,267,825 to 1,269,693
_RS21765
Position (kb)
1266
1267
1268 Strain fitness (log2 ratio)
-1
0
1
2 at 1265.485 kb on + strand, within ABZR87_RS21755 at 1265.486 kb on - strand, within ABZR87_RS21755 at 1265.486 kb on - strand, within ABZR87_RS21755 at 1265.750 kb on + strand, within ABZR87_RS21755 at 1265.750 kb on + strand, within ABZR87_RS21755 at 1265.751 kb on - strand, within ABZR87_RS21755 at 1265.863 kb on + strand, within ABZR87_RS21755 at 1265.863 kb on + strand, within ABZR87_RS21755 at 1265.864 kb on - strand, within ABZR87_RS21755 at 1266.275 kb on - strand, within ABZR87_RS21755 at 1266.753 kb on + strand, within ABZR87_RS21760 at 1266.753 kb on + strand, within ABZR87_RS21760 at 1266.754 kb on - strand, within ABZR87_RS21760 at 1266.922 kb on + strand, within ABZR87_RS21760 at 1266.922 kb on + strand, within ABZR87_RS21760 at 1266.923 kb on - strand, within ABZR87_RS21760 at 1267.013 kb on + strand, within ABZR87_RS21760 at 1267.114 kb on + strand at 1267.114 kb on + strand at 1267.115 kb on - strand at 1267.160 kb on - strand at 1267.363 kb on + strand at 1267.364 kb on - strand at 1267.409 kb on - strand at 1267.409 kb on - strand at 1267.409 kb on - strand at 1267.532 kb on + strand at 1267.672 kb on + strand at 1267.672 kb on + strand at 1267.672 kb on + strand at 1267.887 kb on - strand at 1267.966 kb on + strand at 1268.108 kb on + strand, within ABZR87_RS21765 at 1268.108 kb on + strand, within ABZR87_RS21765 at 1268.109 kb on - strand, within ABZR87_RS21765 at 1268.109 kb on - strand, within ABZR87_RS21765 at 1268.109 kb on - strand, within ABZR87_RS21765
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 1,265,485 + ABZR87_RS21755 0.11 +0.7 1,265,486 - ABZR87_RS21755 0.11 +0.3 1,265,486 - ABZR87_RS21755 0.11 -0.7 1,265,750 + ABZR87_RS21755 0.35 -0.3 1,265,750 + ABZR87_RS21755 0.35 -1.1 1,265,751 - ABZR87_RS21755 0.35 +0.9 1,265,863 + ABZR87_RS21755 0.45 +0.3 1,265,863 + ABZR87_RS21755 0.45 -0.1 1,265,864 - ABZR87_RS21755 0.45 +0.2 1,266,275 - ABZR87_RS21755 0.81 +0.2 1,266,753 + ABZR87_RS21760 0.43 +0.7 1,266,753 + ABZR87_RS21760 0.43 +0.4 1,266,754 - ABZR87_RS21760 0.43 +0.5 1,266,922 + ABZR87_RS21760 0.69 +0.5 1,266,922 + ABZR87_RS21760 0.69 -1.6 1,266,923 - ABZR87_RS21760 0.69 +0.1 1,267,013 + ABZR87_RS21760 0.83 +1.2 1,267,114 + +0.4 1,267,114 + +0.4 1,267,115 - +0.8 1,267,160 - -1.0 1,267,363 + -0.8 1,267,364 - +2.1 1,267,409 - +0.2 1,267,409 - +1.1 1,267,409 - +1.3 1,267,532 + +0.1 1,267,672 + -0.5 1,267,672 + +0.3 1,267,672 + +1.0 1,267,887 - -0.5 1,267,966 + +0.1 1,268,108 + ABZR87_RS21765 0.15 -0.4 1,268,108 + ABZR87_RS21765 0.15 +0.5 1,268,109 - ABZR87_RS21765 0.15 -0.1 1,268,109 - ABZR87_RS21765 0.15 -0.3 1,268,109 - ABZR87_RS21765 0.15 +0.7
Or see this region's nucleotide sequence