Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16685 and ABZR87_RS16690 are separated by 187 nucleotides ABZR87_RS16690 and ABZR87_RS16695 are separated by 93 nucleotides
ABZR87_RS16685: ABZR87_RS16685 - MFS transporter, at 90,783 to 92,081
_RS16685
ABZR87_RS16690: ABZR87_RS16690 - TetR/AcrR family transcriptional regulator, at 92,269 to 92,946
_RS16690
ABZR87_RS16695: ABZR87_RS16695 - MoxR family ATPase, at 93,040 to 94,002
_RS16695
Position (kb) 92
93 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 91.315 kb on + strand, within ABZR87_RS16685 at 91.316 kb on - strand, within ABZR87_RS16685 at 91.407 kb on + strand, within ABZR87_RS16685 at 91.468 kb on + strand, within ABZR87_RS16685 at 91.468 kb on + strand, within ABZR87_RS16685 at 91.468 kb on + strand, within ABZR87_RS16685 at 91.468 kb on + strand, within ABZR87_RS16685 at 91.468 kb on + strand, within ABZR87_RS16685 at 91.469 kb on - strand, within ABZR87_RS16685 at 91.469 kb on - strand, within ABZR87_RS16685 at 91.515 kb on + strand, within ABZR87_RS16685 at 91.516 kb on - strand, within ABZR87_RS16685 at 91.516 kb on - strand, within ABZR87_RS16685 at 91.576 kb on + strand, within ABZR87_RS16685 at 91.576 kb on + strand, within ABZR87_RS16685 at 91.577 kb on - strand, within ABZR87_RS16685 at 91.577 kb on - strand, within ABZR87_RS16685 at 91.577 kb on - strand, within ABZR87_RS16685 at 91.577 kb on - strand, within ABZR87_RS16685 at 91.849 kb on + strand, within ABZR87_RS16685 at 91.849 kb on + strand, within ABZR87_RS16685 at 91.849 kb on + strand, within ABZR87_RS16685 at 91.849 kb on + strand, within ABZR87_RS16685 at 91.850 kb on - strand, within ABZR87_RS16685 at 91.850 kb on - strand, within ABZR87_RS16685 at 91.850 kb on - strand, within ABZR87_RS16685 at 91.850 kb on - strand, within ABZR87_RS16685 at 91.889 kb on - strand, within ABZR87_RS16685 at 92.041 kb on + strand at 92.042 kb on - strand at 92.042 kb on - strand at 92.136 kb on + strand at 92.175 kb on + strand at 92.178 kb on + strand at 92.178 kb on + strand at 92.179 kb on - strand at 92.262 kb on + strand at 92.262 kb on + strand at 92.262 kb on + strand at 92.262 kb on + strand at 92.262 kb on + strand at 92.263 kb on - strand at 92.263 kb on - strand at 92.263 kb on - strand at 92.263 kb on - strand at 92.263 kb on - strand at 92.263 kb on - strand at 92.358 kb on + strand, within ABZR87_RS16690 at 92.413 kb on + strand, within ABZR87_RS16690 at 92.413 kb on + strand, within ABZR87_RS16690 at 92.414 kb on - strand, within ABZR87_RS16690 at 92.416 kb on + strand, within ABZR87_RS16690 at 92.417 kb on - strand, within ABZR87_RS16690 at 92.417 kb on - strand, within ABZR87_RS16690 at 92.474 kb on - strand, within ABZR87_RS16690 at 92.486 kb on - strand, within ABZR87_RS16690 at 92.524 kb on + strand, within ABZR87_RS16690 at 92.524 kb on + strand, within ABZR87_RS16690 at 92.524 kb on + strand, within ABZR87_RS16690 at 92.557 kb on + strand, within ABZR87_RS16690 at 92.627 kb on + strand, within ABZR87_RS16690 at 92.628 kb on - strand, within ABZR87_RS16690 at 92.836 kb on + strand, within ABZR87_RS16690 at 92.836 kb on + strand, within ABZR87_RS16690 at 92.836 kb on + strand, within ABZR87_RS16690 at 92.839 kb on - strand, within ABZR87_RS16690 at 92.952 kb on + strand at 92.953 kb on - strand at 93.004 kb on + strand at 93.005 kb on - strand at 93.005 kb on - strand at 93.075 kb on + strand at 93.231 kb on - strand, within ABZR87_RS16695 at 93.280 kb on + strand, within ABZR87_RS16695 at 93.280 kb on + strand, within ABZR87_RS16695 at 93.281 kb on - strand, within ABZR87_RS16695 at 93.340 kb on + strand, within ABZR87_RS16695 at 93.341 kb on - strand, within ABZR87_RS16695 at 93.493 kb on + strand, within ABZR87_RS16695 at 93.493 kb on + strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.641 kb on - strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 91,315 + ABZR87_RS16685 0.41 +0.4 91,316 - ABZR87_RS16685 0.41 +0.9 91,407 + ABZR87_RS16685 0.48 +0.2 91,468 + ABZR87_RS16685 0.53 +0.2 91,468 + ABZR87_RS16685 0.53 -0.0 91,468 + ABZR87_RS16685 0.53 -1.3 91,468 + ABZR87_RS16685 0.53 +0.0 91,468 + ABZR87_RS16685 0.53 +1.0 91,469 - ABZR87_RS16685 0.53 +0.3 91,469 - ABZR87_RS16685 0.53 -1.4 91,515 + ABZR87_RS16685 0.56 -0.3 91,516 - ABZR87_RS16685 0.56 +0.6 91,516 - ABZR87_RS16685 0.56 -0.2 91,576 + ABZR87_RS16685 0.61 +3.6 91,576 + ABZR87_RS16685 0.61 +2.0 91,577 - ABZR87_RS16685 0.61 +0.4 91,577 - ABZR87_RS16685 0.61 -0.7 91,577 - ABZR87_RS16685 0.61 +1.1 91,577 - ABZR87_RS16685 0.61 -2.5 91,849 + ABZR87_RS16685 0.82 +0.2 91,849 + ABZR87_RS16685 0.82 -0.0 91,849 + ABZR87_RS16685 0.82 +1.6 91,849 + ABZR87_RS16685 0.82 -0.9 91,850 - ABZR87_RS16685 0.82 +1.4 91,850 - ABZR87_RS16685 0.82 -0.9 91,850 - ABZR87_RS16685 0.82 -3.0 91,850 - ABZR87_RS16685 0.82 +0.9 91,889 - ABZR87_RS16685 0.85 +1.9 92,041 + +2.4 92,042 - -1.0 92,042 - +1.4 92,136 + -0.4 92,175 + -0.9 92,178 + -0.5 92,178 + -0.2 92,179 - +0.0 92,262 + +0.3 92,262 + -1.4 92,262 + +0.6 92,262 + -0.9 92,262 + -0.5 92,263 - -1.6 92,263 - +0.4 92,263 - -0.1 92,263 - -1.7 92,263 - +0.3 92,263 - -0.4 92,358 + ABZR87_RS16690 0.13 -1.9 92,413 + ABZR87_RS16690 0.21 -1.3 92,413 + ABZR87_RS16690 0.21 -1.8 92,414 - ABZR87_RS16690 0.21 -1.3 92,416 + ABZR87_RS16690 0.22 -1.3 92,417 - ABZR87_RS16690 0.22 -1.0 92,417 - ABZR87_RS16690 0.22 -2.6 92,474 - ABZR87_RS16690 0.30 -0.8 92,486 - ABZR87_RS16690 0.32 +0.1 92,524 + ABZR87_RS16690 0.38 -0.4 92,524 + ABZR87_RS16690 0.38 -1.7 92,524 + ABZR87_RS16690 0.38 +0.9 92,557 + ABZR87_RS16690 0.42 -0.9 92,627 + ABZR87_RS16690 0.53 -1.0 92,628 - ABZR87_RS16690 0.53 -1.8 92,836 + ABZR87_RS16690 0.84 +0.4 92,836 + ABZR87_RS16690 0.84 +0.1 92,836 + ABZR87_RS16690 0.84 -0.3 92,839 - ABZR87_RS16690 0.84 -1.8 92,952 + +1.3 92,953 - -1.0 93,004 + +1.1 93,005 - +0.8 93,005 - -2.5 93,075 + -1.0 93,231 - ABZR87_RS16695 0.20 -0.3 93,280 + ABZR87_RS16695 0.25 +1.4 93,280 + ABZR87_RS16695 0.25 -0.0 93,281 - ABZR87_RS16695 0.25 -1.1 93,340 + ABZR87_RS16695 0.31 +0.3 93,341 - ABZR87_RS16695 0.31 +0.1 93,493 + ABZR87_RS16695 0.47 -0.1 93,493 + ABZR87_RS16695 0.47 +0.7 93,494 - ABZR87_RS16695 0.47 +0.2 93,494 - ABZR87_RS16695 0.47 +0.1 93,494 - ABZR87_RS16695 0.47 -0.2 93,640 + ABZR87_RS16695 0.62 +0.1 93,640 + ABZR87_RS16695 0.62 +0.6 93,640 + ABZR87_RS16695 0.62 +0.3 93,641 - ABZR87_RS16695 0.62 -1.4 93,751 + ABZR87_RS16695 0.74 -0.8 93,751 + ABZR87_RS16695 0.74 +1.9 93,751 + ABZR87_RS16695 0.74 -0.7 93,751 + ABZR87_RS16695 0.74 -0.6 93,751 + ABZR87_RS16695 0.74 +0.3 93,752 - ABZR87_RS16695 0.74 -0.8 93,752 - ABZR87_RS16695 0.74 -0.6 93,752 - ABZR87_RS16695 0.74 +0.3
Or see this region's nucleotide sequence