Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16325 and ABZR87_RS16330 are separated by 130 nucleotides ABZR87_RS16330 and ABZR87_RS16335 are separated by 10 nucleotides ABZR87_RS16335 and ABZR87_RS16340 are separated by 7 nucleotides
ABZR87_RS16325: ABZR87_RS16325 - ABC transporter substrate-binding protein, at 15,309 to 16,469
_RS16325
ABZR87_RS16330: ABZR87_RS16330 - branched-chain amino acid ABC transporter permease, at 16,600 to 17,481
_RS16330
ABZR87_RS16335: ABZR87_RS16335 - branched-chain amino acid ABC transporter permease, at 17,492 to 18,400
_RS16335
ABZR87_RS16340: ABZR87_RS16340 - ABC transporter ATP-binding protein, at 18,408 to 19,205
_RS16340
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 15.823 kb on - strand, within ABZR87_RS16325 at 15.823 kb on - strand, within ABZR87_RS16325 at 16.188 kb on + strand, within ABZR87_RS16325 at 16.189 kb on - strand, within ABZR87_RS16325 at 16.200 kb on + strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.201 kb on - strand, within ABZR87_RS16325 at 16.236 kb on + strand, within ABZR87_RS16325 at 16.237 kb on - strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.248 kb on + strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.249 kb on - strand, within ABZR87_RS16325 at 16.277 kb on + strand, within ABZR87_RS16325 at 16.278 kb on - strand, within ABZR87_RS16325 at 16.452 kb on + strand at 16.452 kb on + strand at 16.453 kb on - strand at 16.453 kb on - strand at 16.453 kb on - strand at 16.453 kb on - strand at 16.467 kb on + strand at 16.468 kb on - strand at 16.514 kb on + strand at 16.514 kb on + strand at 16.518 kb on + strand at 16.518 kb on + strand at 16.519 kb on - strand at 16.519 kb on - strand at 16.519 kb on - strand at 16.524 kb on + strand at 16.524 kb on + strand at 16.645 kb on + strand at 16.645 kb on + strand at 16.645 kb on + strand at 16.646 kb on - strand at 16.646 kb on - strand at 16.646 kb on - strand at 16.646 kb on - strand at 16.735 kb on + strand, within ABZR87_RS16330 at 16.736 kb on - strand, within ABZR87_RS16330 at 17.230 kb on + strand, within ABZR87_RS16330 at 17.230 kb on + strand, within ABZR87_RS16330 at 17.231 kb on - strand, within ABZR87_RS16330 at 17.231 kb on - strand, within ABZR87_RS16330 at 17.374 kb on + strand, within ABZR87_RS16330 at 17.374 kb on + strand, within ABZR87_RS16330 at 17.374 kb on + strand, within ABZR87_RS16330 at 17.375 kb on - strand, within ABZR87_RS16330 at 17.375 kb on - strand, within ABZR87_RS16330 at 17.479 kb on + strand at 17.480 kb on - strand at 17.577 kb on - strand at 17.639 kb on + strand, within ABZR87_RS16335 at 17.639 kb on + strand, within ABZR87_RS16335 at 17.639 kb on + strand, within ABZR87_RS16335 at 17.766 kb on - strand, within ABZR87_RS16335 at 17.995 kb on + strand, within ABZR87_RS16335 at 17.996 kb on - strand, within ABZR87_RS16335 at 18.019 kb on + strand, within ABZR87_RS16335 at 18.019 kb on + strand, within ABZR87_RS16335 at 18.019 kb on + strand, within ABZR87_RS16335 at 18.019 kb on + strand, within ABZR87_RS16335 at 18.019 kb on + strand, within ABZR87_RS16335 at 18.020 kb on - strand, within ABZR87_RS16335 at 18.020 kb on - strand, within ABZR87_RS16335
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 15,823 - ABZR87_RS16325 0.44 -0.2 15,823 - ABZR87_RS16325 0.44 +0.2 16,188 + ABZR87_RS16325 0.76 +0.7 16,189 - ABZR87_RS16325 0.76 -0.3 16,200 + ABZR87_RS16325 0.77 -0.7 16,201 - ABZR87_RS16325 0.77 +0.4 16,201 - ABZR87_RS16325 0.77 -0.7 16,201 - ABZR87_RS16325 0.77 -0.3 16,201 - ABZR87_RS16325 0.77 +0.2 16,201 - ABZR87_RS16325 0.77 +0.5 16,201 - ABZR87_RS16325 0.77 -0.5 16,236 + ABZR87_RS16325 0.80 -1.1 16,237 - ABZR87_RS16325 0.80 -0.6 16,248 + ABZR87_RS16325 0.81 -0.6 16,248 + ABZR87_RS16325 0.81 -1.6 16,248 + ABZR87_RS16325 0.81 -0.3 16,248 + ABZR87_RS16325 0.81 -1.6 16,248 + ABZR87_RS16325 0.81 +1.5 16,248 + ABZR87_RS16325 0.81 +0.0 16,248 + ABZR87_RS16325 0.81 -0.1 16,248 + ABZR87_RS16325 0.81 +1.0 16,248 + ABZR87_RS16325 0.81 -0.4 16,249 - ABZR87_RS16325 0.81 +0.1 16,249 - ABZR87_RS16325 0.81 -1.1 16,249 - ABZR87_RS16325 0.81 +0.9 16,249 - ABZR87_RS16325 0.81 +0.3 16,249 - ABZR87_RS16325 0.81 +0.3 16,249 - ABZR87_RS16325 0.81 -1.9 16,249 - ABZR87_RS16325 0.81 +2.2 16,277 + ABZR87_RS16325 0.83 +0.1 16,278 - ABZR87_RS16325 0.83 -2.9 16,452 + -1.0 16,452 + -0.4 16,453 - +1.0 16,453 - +0.2 16,453 - +0.0 16,453 - -1.5 16,467 + -0.6 16,468 - +0.2 16,514 + +0.3 16,514 + +0.7 16,518 + -0.7 16,518 + -0.1 16,519 - +0.2 16,519 - -0.3 16,519 - -0.2 16,524 + -0.7 16,524 + +0.5 16,645 + +0.3 16,645 + +0.6 16,645 + -0.1 16,646 - -0.7 16,646 - +0.5 16,646 - -1.2 16,646 - -0.7 16,735 + ABZR87_RS16330 0.15 -1.4 16,736 - ABZR87_RS16330 0.15 -0.0 17,230 + ABZR87_RS16330 0.71 -0.3 17,230 + ABZR87_RS16330 0.71 +0.3 17,231 - ABZR87_RS16330 0.72 +0.1 17,231 - ABZR87_RS16330 0.72 +2.2 17,374 + ABZR87_RS16330 0.88 +1.0 17,374 + ABZR87_RS16330 0.88 -1.5 17,374 + ABZR87_RS16330 0.88 +0.7 17,375 - ABZR87_RS16330 0.88 +0.2 17,375 - ABZR87_RS16330 0.88 -1.4 17,479 + -0.9 17,480 - -0.4 17,577 - +0.7 17,639 + ABZR87_RS16335 0.16 +0.8 17,639 + ABZR87_RS16335 0.16 -0.5 17,639 + ABZR87_RS16335 0.16 -1.2 17,766 - ABZR87_RS16335 0.30 -0.5 17,995 + ABZR87_RS16335 0.55 +0.2 17,996 - ABZR87_RS16335 0.55 -1.7 18,019 + ABZR87_RS16335 0.58 +0.0 18,019 + ABZR87_RS16335 0.58 -0.9 18,019 + ABZR87_RS16335 0.58 -1.1 18,019 + ABZR87_RS16335 0.58 +1.4 18,019 + ABZR87_RS16335 0.58 +0.7 18,020 - ABZR87_RS16335 0.58 +0.1 18,020 - ABZR87_RS16335 0.58 +0.9
Or see this region's nucleotide sequence