Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11115 and ABZR87_RS11120 are separated by 187 nucleotides ABZR87_RS11120 and ABZR87_RS11125 are separated by 101 nucleotides
ABZR87_RS11115: ABZR87_RS11115 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 2,358,183 to 2,359,442
_RS11115
ABZR87_RS11120: ABZR87_RS11120 - dihydrolipoyl dehydrogenase, at 2,359,630 to 2,361,066
_RS11120
ABZR87_RS11125: ABZR87_RS11125 - cell division protein ZapE, at 2,361,168 to 2,362,265
_RS11125
Position (kb)
2359
2360
2361
2362 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2359.458 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.504 kb on + strand at 2359.573 kb on + strand at 2359.574 kb on - strand at 2361.060 kb on + strand at 2361.060 kb on + strand at 2361.060 kb on + strand at 2361.064 kb on + strand at 2361.065 kb on - strand at 2361.186 kb on + strand at 2361.187 kb on - strand at 2361.187 kb on - strand at 2361.190 kb on + strand at 2361.191 kb on - strand at 2361.191 kb on - strand at 2361.213 kb on + strand at 2361.348 kb on + strand, within ABZR87_RS11125 at 2361.349 kb on - strand, within ABZR87_RS11125 at 2361.349 kb on - strand, within ABZR87_RS11125 at 2361.399 kb on + strand, within ABZR87_RS11125 at 2361.399 kb on + strand, within ABZR87_RS11125 at 2361.399 kb on + strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.400 kb on - strand, within ABZR87_RS11125 at 2361.401 kb on + strand, within ABZR87_RS11125 at 2361.402 kb on - strand, within ABZR87_RS11125 at 2361.402 kb on - strand, within ABZR87_RS11125 at 2361.795 kb on + strand, within ABZR87_RS11125 at 2361.796 kb on - strand, within ABZR87_RS11125 at 2361.796 kb on - strand, within ABZR87_RS11125 at 2361.796 kb on - strand, within ABZR87_RS11125 at 2361.796 kb on - strand, within ABZR87_RS11125 at 2361.798 kb on + strand, within ABZR87_RS11125 at 2361.799 kb on - strand, within ABZR87_RS11125 at 2361.799 kb on - strand, within ABZR87_RS11125 at 2361.845 kb on + strand, within ABZR87_RS11125 at 2361.846 kb on + strand, within ABZR87_RS11125 at 2361.917 kb on + strand, within ABZR87_RS11125 at 2361.984 kb on + strand, within ABZR87_RS11125
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,359,458 + -0.3 2,359,504 + +1.1 2,359,504 + +0.7 2,359,504 + +0.6 2,359,504 + +2.1 2,359,504 + +2.2 2,359,504 + -0.5 2,359,504 + +0.6 2,359,573 + +0.0 2,359,574 - +1.1 2,361,060 + +0.8 2,361,060 + +1.4 2,361,060 + +0.0 2,361,064 + -1.4 2,361,065 - -4.6 2,361,186 + +2.1 2,361,187 - -0.9 2,361,187 - -0.5 2,361,190 + -0.9 2,361,191 - -0.1 2,361,191 - -1.2 2,361,213 + -1.7 2,361,348 + ABZR87_RS11125 0.16 -1.9 2,361,349 - ABZR87_RS11125 0.16 +0.4 2,361,349 - ABZR87_RS11125 0.16 -2.5 2,361,399 + ABZR87_RS11125 0.21 -1.7 2,361,399 + ABZR87_RS11125 0.21 -1.9 2,361,399 + ABZR87_RS11125 0.21 +1.1 2,361,400 - ABZR87_RS11125 0.21 -2.8 2,361,400 - ABZR87_RS11125 0.21 -0.9 2,361,400 - ABZR87_RS11125 0.21 -2.1 2,361,400 - ABZR87_RS11125 0.21 -1.2 2,361,400 - ABZR87_RS11125 0.21 -0.9 2,361,400 - ABZR87_RS11125 0.21 -2.9 2,361,401 + ABZR87_RS11125 0.21 -1.7 2,361,402 - ABZR87_RS11125 0.21 -3.5 2,361,402 - ABZR87_RS11125 0.21 -1.9 2,361,795 + ABZR87_RS11125 0.57 -0.9 2,361,796 - ABZR87_RS11125 0.57 -0.5 2,361,796 - ABZR87_RS11125 0.57 -2.1 2,361,796 - ABZR87_RS11125 0.57 -2.1 2,361,796 - ABZR87_RS11125 0.57 -0.5 2,361,798 + ABZR87_RS11125 0.57 -0.9 2,361,799 - ABZR87_RS11125 0.57 -0.8 2,361,799 - ABZR87_RS11125 0.57 -2.9 2,361,845 + ABZR87_RS11125 0.62 -2.4 2,361,846 + ABZR87_RS11125 0.62 -5.2 2,361,917 + ABZR87_RS11125 0.68 +1.1 2,361,984 + ABZR87_RS11125 0.74 +0.2
Or see this region's nucleotide sequence