Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09695 and ABZR87_RS09700 are separated by 121 nucleotides ABZR87_RS09700 and ABZR87_RS09705 are separated by 494 nucleotides ABZR87_RS09705 and ABZR87_RS09710 are separated by 112 nucleotides
ABZR87_RS09695: ABZR87_RS09695 - ergothioneine biosynthesis protein EgtB, at 2,052,979 to 2,054,277
_RS09695
ABZR87_RS09700: ABZR87_RS09700 - DEAD/DEAH box helicase, at 2,054,399 to 2,056,264
_RS09700
ABZR87_RS09705: ABZR87_RS09705 - hypothetical protein, at 2,056,759 to 2,056,947
_RS09705
ABZR87_RS09710: ABZR87_RS09710 - tRNA-Arg, at 2,057,060 to 2,057,134
_RS09710
Position (kb)
2054
2055
2056
2057 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2053.439 kb on + strand, within ABZR87_RS09695 at 2053.440 kb on - strand, within ABZR87_RS09695 at 2053.440 kb on - strand, within ABZR87_RS09695 at 2053.443 kb on + strand, within ABZR87_RS09695 at 2053.443 kb on + strand, within ABZR87_RS09695 at 2053.443 kb on + strand, within ABZR87_RS09695 at 2053.443 kb on + strand, within ABZR87_RS09695 at 2053.443 kb on + strand, within ABZR87_RS09695 at 2053.444 kb on - strand, within ABZR87_RS09695 at 2053.444 kb on - strand, within ABZR87_RS09695 at 2053.444 kb on - strand, within ABZR87_RS09695 at 2053.553 kb on + strand, within ABZR87_RS09695 at 2053.554 kb on - strand, within ABZR87_RS09695 at 2053.683 kb on - strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.702 kb on + strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.703 kb on - strand, within ABZR87_RS09695 at 2053.750 kb on + strand, within ABZR87_RS09695 at 2053.750 kb on + strand, within ABZR87_RS09695 at 2053.751 kb on - strand, within ABZR87_RS09695 at 2053.894 kb on + strand, within ABZR87_RS09695 at 2053.948 kb on + strand, within ABZR87_RS09695 at 2053.948 kb on + strand, within ABZR87_RS09695 at 2053.949 kb on - strand, within ABZR87_RS09695 at 2054.184 kb on + strand at 2054.185 kb on - strand at 2054.337 kb on - strand at 2054.337 kb on - strand at 2054.337 kb on - strand at 2054.337 kb on - strand at 2054.373 kb on - strand at 2054.385 kb on + strand at 2054.436 kb on + strand at 2054.436 kb on + strand at 2054.436 kb on + strand at 2054.437 kb on - strand at 2054.437 kb on - strand at 2054.467 kb on - strand at 2054.560 kb on - strand at 2054.645 kb on - strand, within ABZR87_RS09700 at 2054.695 kb on - strand, within ABZR87_RS09700 at 2054.695 kb on - strand, within ABZR87_RS09700 at 2055.106 kb on + strand, within ABZR87_RS09700 at 2055.126 kb on + strand, within ABZR87_RS09700 at 2055.126 kb on + strand, within ABZR87_RS09700 at 2055.126 kb on + strand, within ABZR87_RS09700 at 2055.826 kb on - strand, within ABZR87_RS09700 at 2055.826 kb on - strand, within ABZR87_RS09700 at 2056.107 kb on + strand at 2056.107 kb on + strand at 2056.107 kb on + strand at 2056.272 kb on - strand at 2056.272 kb on - strand at 2056.272 kb on - strand at 2056.272 kb on - strand at 2056.275 kb on + strand at 2056.275 kb on + strand at 2056.275 kb on + strand at 2056.275 kb on + strand at 2056.276 kb on - strand at 2056.276 kb on - strand at 2056.276 kb on - strand at 2056.278 kb on + strand at 2056.278 kb on + strand at 2056.278 kb on + strand at 2056.340 kb on + strand at 2056.606 kb on - strand at 2056.614 kb on - strand at 2056.634 kb on - strand at 2056.634 kb on - strand at 2056.634 kb on - strand at 2056.634 kb on - strand at 2056.634 kb on - strand at 2056.635 kb on + strand at 2056.635 kb on + strand at 2056.636 kb on - strand at 2056.718 kb on + strand at 2056.718 kb on + strand at 2056.718 kb on + strand at 2056.719 kb on - strand at 2056.719 kb on - strand at 2056.720 kb on + strand at 2056.720 kb on + strand at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.790 kb on + strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.791 kb on - strand, within ABZR87_RS09705 at 2056.792 kb on + strand, within ABZR87_RS09705 at 2056.792 kb on + strand, within ABZR87_RS09705 at 2056.792 kb on + strand, within ABZR87_RS09705 at 2056.792 kb on + strand, within ABZR87_RS09705 at 2056.792 kb on + strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.793 kb on - strand, within ABZR87_RS09705 at 2056.794 kb on + strand, within ABZR87_RS09705 at 2056.869 kb on - strand, within ABZR87_RS09705 at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.945 kb on + strand at 2056.946 kb on - strand at 2056.946 kb on - strand at 2056.972 kb on + strand at 2056.972 kb on + strand at 2056.973 kb on - strand at 2056.973 kb on - strand at 2056.973 kb on - strand at 2056.973 kb on - strand at 2057.042 kb on + strand at 2057.043 kb on - strand at 2057.043 kb on - strand at 2057.043 kb on - strand at 2057.043 kb on - strand at 2057.088 kb on - strand, within ABZR87_RS09710 at 2057.088 kb on - strand, within ABZR87_RS09710 at 2057.098 kb on + strand, within ABZR87_RS09710 at 2057.098 kb on + strand, within ABZR87_RS09710 at 2057.098 kb on + strand, within ABZR87_RS09710 at 2057.099 kb on - strand, within ABZR87_RS09710 at 2057.099 kb on - strand, within ABZR87_RS09710 at 2057.099 kb on - strand, within ABZR87_RS09710 at 2057.184 kb on + strand at 2057.184 kb on + strand at 2057.246 kb on - strand at 2057.257 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,053,439 + ABZR87_RS09695 0.35 +0.6 2,053,440 - ABZR87_RS09695 0.35 -3.0 2,053,440 - ABZR87_RS09695 0.35 +0.6 2,053,443 + ABZR87_RS09695 0.36 +0.1 2,053,443 + ABZR87_RS09695 0.36 +0.0 2,053,443 + ABZR87_RS09695 0.36 -2.2 2,053,443 + ABZR87_RS09695 0.36 +0.7 2,053,443 + ABZR87_RS09695 0.36 -1.3 2,053,444 - ABZR87_RS09695 0.36 -0.1 2,053,444 - ABZR87_RS09695 0.36 -0.2 2,053,444 - ABZR87_RS09695 0.36 +1.5 2,053,553 + ABZR87_RS09695 0.44 +0.4 2,053,554 - ABZR87_RS09695 0.44 -1.1 2,053,683 - ABZR87_RS09695 0.54 +0.7 2,053,702 + ABZR87_RS09695 0.56 +0.1 2,053,702 + ABZR87_RS09695 0.56 +1.2 2,053,702 + ABZR87_RS09695 0.56 +1.8 2,053,702 + ABZR87_RS09695 0.56 +0.3 2,053,702 + ABZR87_RS09695 0.56 +0.4 2,053,702 + ABZR87_RS09695 0.56 +1.2 2,053,702 + ABZR87_RS09695 0.56 -0.1 2,053,702 + ABZR87_RS09695 0.56 +1.7 2,053,702 + ABZR87_RS09695 0.56 -0.4 2,053,702 + ABZR87_RS09695 0.56 -0.1 2,053,702 + ABZR87_RS09695 0.56 -2.2 2,053,702 + ABZR87_RS09695 0.56 -0.4 2,053,702 + ABZR87_RS09695 0.56 -0.8 2,053,702 + ABZR87_RS09695 0.56 +0.8 2,053,703 - ABZR87_RS09695 0.56 -0.1 2,053,703 - ABZR87_RS09695 0.56 +0.0 2,053,703 - ABZR87_RS09695 0.56 -0.7 2,053,703 - ABZR87_RS09695 0.56 +0.7 2,053,703 - ABZR87_RS09695 0.56 +0.3 2,053,703 - ABZR87_RS09695 0.56 +0.3 2,053,750 + ABZR87_RS09695 0.59 -0.2 2,053,750 + ABZR87_RS09695 0.59 -0.0 2,053,751 - ABZR87_RS09695 0.59 -0.7 2,053,894 + ABZR87_RS09695 0.70 +0.5 2,053,948 + ABZR87_RS09695 0.75 +0.1 2,053,948 + ABZR87_RS09695 0.75 +0.9 2,053,949 - ABZR87_RS09695 0.75 -1.3 2,054,184 + +1.0 2,054,185 - -0.7 2,054,337 - +1.1 2,054,337 - -0.8 2,054,337 - -0.3 2,054,337 - -1.9 2,054,373 - +0.7 2,054,385 + +0.1 2,054,436 + -1.5 2,054,436 + -1.3 2,054,436 + -0.0 2,054,437 - -0.2 2,054,437 - +1.3 2,054,467 - +0.5 2,054,560 - +1.8 2,054,645 - ABZR87_RS09700 0.13 -1.4 2,054,695 - ABZR87_RS09700 0.16 -2.6 2,054,695 - ABZR87_RS09700 0.16 -2.7 2,055,106 + ABZR87_RS09700 0.38 -1.7 2,055,126 + ABZR87_RS09700 0.39 -1.1 2,055,126 + ABZR87_RS09700 0.39 -1.9 2,055,126 + ABZR87_RS09700 0.39 -2.8 2,055,826 - ABZR87_RS09700 0.76 -2.8 2,055,826 - ABZR87_RS09700 0.76 -3.4 2,056,107 + -1.9 2,056,107 + -4.8 2,056,107 + -3.2 2,056,272 - +1.3 2,056,272 - +0.3 2,056,272 - -0.5 2,056,272 - +1.5 2,056,275 + -2.1 2,056,275 + -1.1 2,056,275 + -0.7 2,056,275 + -3.1 2,056,276 - +1.8 2,056,276 - +2.3 2,056,276 - +2.6 2,056,278 + -3.1 2,056,278 + +1.3 2,056,278 + -2.9 2,056,340 + -1.9 2,056,606 - -1.3 2,056,614 - -3.8 2,056,634 - -1.1 2,056,634 - -4.2 2,056,634 - -2.1 2,056,634 - -2.4 2,056,634 - -2.3 2,056,635 + -2.0 2,056,635 + -1.6 2,056,636 - -2.4 2,056,718 + +0.3 2,056,718 + -0.3 2,056,718 + -0.4 2,056,719 - -0.8 2,056,719 - -1.4 2,056,720 + +0.9 2,056,720 + -2.1 2,056,790 + ABZR87_RS09705 0.16 -0.5 2,056,790 + ABZR87_RS09705 0.16 +0.5 2,056,790 + ABZR87_RS09705 0.16 -0.6 2,056,790 + ABZR87_RS09705 0.16 -0.5 2,056,790 + ABZR87_RS09705 0.16 +0.9 2,056,790 + ABZR87_RS09705 0.16 +1.0 2,056,790 + ABZR87_RS09705 0.16 -0.3 2,056,790 + ABZR87_RS09705 0.16 +0.3 2,056,790 + ABZR87_RS09705 0.16 -0.0 2,056,791 - ABZR87_RS09705 0.17 +0.5 2,056,791 - ABZR87_RS09705 0.17 +0.2 2,056,791 - ABZR87_RS09705 0.17 +0.3 2,056,791 - ABZR87_RS09705 0.17 -0.6 2,056,791 - ABZR87_RS09705 0.17 -2.3 2,056,791 - ABZR87_RS09705 0.17 -0.1 2,056,791 - ABZR87_RS09705 0.17 +0.4 2,056,791 - ABZR87_RS09705 0.17 +0.3 2,056,791 - ABZR87_RS09705 0.17 -0.0 2,056,791 - ABZR87_RS09705 0.17 -0.6 2,056,791 - ABZR87_RS09705 0.17 -0.4 2,056,792 + ABZR87_RS09705 0.17 +0.3 2,056,792 + ABZR87_RS09705 0.17 +0.6 2,056,792 + ABZR87_RS09705 0.17 -0.9 2,056,792 + ABZR87_RS09705 0.17 +1.3 2,056,792 + ABZR87_RS09705 0.17 -1.5 2,056,793 - ABZR87_RS09705 0.18 -0.5 2,056,793 - ABZR87_RS09705 0.18 -0.2 2,056,793 - ABZR87_RS09705 0.18 +0.5 2,056,793 - ABZR87_RS09705 0.18 -2.7 2,056,793 - ABZR87_RS09705 0.18 -1.0 2,056,793 - ABZR87_RS09705 0.18 -0.9 2,056,794 + ABZR87_RS09705 0.19 -0.5 2,056,869 - ABZR87_RS09705 0.58 -0.1 2,056,945 + +1.8 2,056,945 + +0.3 2,056,945 + -0.4 2,056,945 + -0.7 2,056,945 + +0.8 2,056,945 + +0.8 2,056,945 + -0.2 2,056,946 - -1.2 2,056,946 - -0.3 2,056,972 + +0.5 2,056,972 + +0.9 2,056,973 - -0.1 2,056,973 - -0.1 2,056,973 - -0.9 2,056,973 - +0.5 2,057,042 + +1.2 2,057,043 - -1.6 2,057,043 - -0.6 2,057,043 - -1.0 2,057,043 - -0.9 2,057,088 - ABZR87_RS09710 0.37 -2.8 2,057,088 - ABZR87_RS09710 0.37 -3.0 2,057,098 + ABZR87_RS09710 0.51 -1.7 2,057,098 + ABZR87_RS09710 0.51 -1.7 2,057,098 + ABZR87_RS09710 0.51 -1.0 2,057,099 - ABZR87_RS09710 0.52 -2.1 2,057,099 - ABZR87_RS09710 0.52 -3.8 2,057,099 - ABZR87_RS09710 0.52 -2.6 2,057,184 + +1.1 2,057,184 + +0.1 2,057,246 - -0.1 2,057,257 - -1.1
Or see this region's nucleotide sequence