Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09395 and ABZR87_RS09400 are separated by 43 nucleotides ABZR87_RS09400 and ABZR87_RS09410 are separated by 917 nucleotides
ABZR87_RS09395: ABZR87_RS09395 - fimbrial protein, at 1,993,081 to 1,994,097
_RS09395
ABZR87_RS09400: ABZR87_RS09400 - IS3 family transposase, at 1,994,141 to 1,994,276
_RS09400
ABZR87_RS09410: ABZR87_RS09410 - DUF748 domain-containing protein, at 1,995,194 to 1,998,976
_RS09410
Position (kb)
1994
1995 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1993.143 kb on - strand at 1993.158 kb on - strand at 1993.219 kb on + strand, within ABZR87_RS09395 at 1993.219 kb on + strand, within ABZR87_RS09395 at 1993.220 kb on - strand, within ABZR87_RS09395 at 1993.328 kb on + strand, within ABZR87_RS09395 at 1993.353 kb on + strand, within ABZR87_RS09395 at 1993.372 kb on - strand, within ABZR87_RS09395 at 1993.372 kb on - strand, within ABZR87_RS09395 at 1993.398 kb on + strand, within ABZR87_RS09395 at 1993.403 kb on + strand, within ABZR87_RS09395 at 1993.404 kb on - strand, within ABZR87_RS09395 at 1993.483 kb on + strand, within ABZR87_RS09395 at 1993.483 kb on + strand, within ABZR87_RS09395 at 1993.484 kb on - strand, within ABZR87_RS09395 at 1993.493 kb on + strand, within ABZR87_RS09395 at 1993.494 kb on - strand, within ABZR87_RS09395 at 1993.494 kb on - strand, within ABZR87_RS09395 at 1993.494 kb on - strand, within ABZR87_RS09395 at 1993.494 kb on - strand, within ABZR87_RS09395 at 1993.526 kb on - strand, within ABZR87_RS09395 at 1993.546 kb on + strand, within ABZR87_RS09395 at 1993.546 kb on + strand, within ABZR87_RS09395 at 1993.547 kb on - strand, within ABZR87_RS09395 at 1993.547 kb on - strand, within ABZR87_RS09395 at 1993.547 kb on - strand, within ABZR87_RS09395 at 1993.547 kb on - strand, within ABZR87_RS09395 at 1993.615 kb on + strand, within ABZR87_RS09395 at 1993.615 kb on + strand, within ABZR87_RS09395 at 1993.615 kb on + strand, within ABZR87_RS09395 at 1993.615 kb on + strand, within ABZR87_RS09395 at 1993.617 kb on + strand, within ABZR87_RS09395 at 1993.617 kb on + strand, within ABZR87_RS09395 at 1993.617 kb on + strand, within ABZR87_RS09395 at 1993.617 kb on + strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.618 kb on - strand, within ABZR87_RS09395 at 1993.692 kb on + strand, within ABZR87_RS09395 at 1993.692 kb on + strand, within ABZR87_RS09395 at 1993.693 kb on - strand, within ABZR87_RS09395 at 1993.693 kb on - strand, within ABZR87_RS09395 at 1993.693 kb on - strand, within ABZR87_RS09395 at 1993.759 kb on - strand, within ABZR87_RS09395 at 1993.759 kb on - strand, within ABZR87_RS09395 at 1993.759 kb on - strand, within ABZR87_RS09395 at 1993.828 kb on + strand, within ABZR87_RS09395 at 1993.829 kb on - strand, within ABZR87_RS09395 at 1993.851 kb on + strand, within ABZR87_RS09395 at 1993.852 kb on - strand, within ABZR87_RS09395 at 1993.852 kb on - strand, within ABZR87_RS09395 at 1993.978 kb on + strand, within ABZR87_RS09395 at 1994.001 kb on + strand at 1994.001 kb on + strand at 1994.002 kb on - strand at 1994.004 kb on + strand at 1994.023 kb on + strand at 1994.026 kb on + strand at 1994.026 kb on + strand at 1994.026 kb on + strand at 1994.026 kb on + strand at 1994.027 kb on - strand at 1994.027 kb on - strand at 1994.064 kb on + strand at 1994.064 kb on + strand at 1994.064 kb on + strand at 1994.065 kb on - strand at 1994.065 kb on - strand at 1994.065 kb on - strand at 1994.089 kb on + strand at 1994.089 kb on + strand at 1994.089 kb on + strand at 1994.090 kb on - strand at 1994.090 kb on - strand at 1994.090 kb on - strand at 1994.090 kb on - strand at 1994.090 kb on - strand at 1994.095 kb on + strand at 1994.095 kb on + strand at 1994.096 kb on - strand at 1994.096 kb on - strand at 1994.096 kb on - strand at 1994.138 kb on + strand at 1994.139 kb on - strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.345 kb on + strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.346 kb on - strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.347 kb on + strand at 1994.348 kb on - strand at 1994.348 kb on - strand at 1994.348 kb on - strand at 1994.348 kb on - strand at 1994.348 kb on - strand at 1994.393 kb on - strand at 1994.400 kb on + strand at 1994.423 kb on + strand at 1994.510 kb on + strand at 1994.511 kb on - strand at 1994.511 kb on - strand at 1994.521 kb on + strand at 1994.522 kb on - strand at 1994.558 kb on - strand at 1994.567 kb on + strand at 1994.568 kb on - strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.625 kb on + strand at 1994.626 kb on + strand at 1994.626 kb on - strand at 1994.626 kb on - strand at 1994.626 kb on - strand at 1994.626 kb on - strand at 1994.629 kb on + strand at 1994.629 kb on + strand at 1994.629 kb on + strand at 1994.629 kb on + strand at 1994.629 kb on + strand at 1994.629 kb on + strand at 1994.633 kb on + strand at 1994.633 kb on + strand at 1994.634 kb on - strand at 1994.634 kb on - strand at 1994.722 kb on + strand at 1994.722 kb on + strand at 1994.723 kb on - strand at 1994.723 kb on - strand at 1994.754 kb on + strand at 1994.754 kb on + strand at 1994.754 kb on + strand at 1994.755 kb on - strand at 1994.755 kb on - strand at 1994.800 kb on + strand at 1994.801 kb on - strand at 1994.859 kb on - strand at 1994.859 kb on - strand at 1994.859 kb on - strand at 1994.862 kb on + strand at 1994.862 kb on + strand at 1994.862 kb on + strand at 1994.866 kb on + strand at 1994.866 kb on + strand at 1994.866 kb on + strand at 1994.866 kb on + strand at 1994.866 kb on + strand at 1994.866 kb on + strand at 1994.867 kb on - strand at 1994.867 kb on - strand at 1994.913 kb on + strand at 1994.944 kb on - strand at 1994.960 kb on + strand at 1994.960 kb on + strand at 1994.961 kb on - strand at 1994.967 kb on + strand at 1994.968 kb on - strand at 1994.968 kb on - strand at 1994.976 kb on + strand at 1994.976 kb on + strand at 1995.004 kb on - strand at 1995.075 kb on + strand at 1995.075 kb on + strand at 1995.075 kb on + strand at 1995.075 kb on + strand at 1995.179 kb on + strand at 1995.180 kb on - strand at 1995.180 kb on - strand at 1995.180 kb on - strand at 1995.186 kb on + strand at 1995.186 kb on + strand at 1995.186 kb on + strand at 1995.186 kb on + strand at 1995.186 kb on + strand at 1995.186 kb on + strand at 1995.187 kb on - strand at 1995.196 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 1,993,143 - +0.4 1,993,158 - +0.3 1,993,219 + ABZR87_RS09395 0.14 +0.6 1,993,219 + ABZR87_RS09395 0.14 -0.4 1,993,220 - ABZR87_RS09395 0.14 +1.0 1,993,328 + ABZR87_RS09395 0.24 +0.1 1,993,353 + ABZR87_RS09395 0.27 +1.8 1,993,372 - ABZR87_RS09395 0.29 -1.0 1,993,372 - ABZR87_RS09395 0.29 -2.6 1,993,398 + ABZR87_RS09395 0.31 +0.4 1,993,403 + ABZR87_RS09395 0.32 +0.6 1,993,404 - ABZR87_RS09395 0.32 -0.1 1,993,483 + ABZR87_RS09395 0.40 +0.2 1,993,483 + ABZR87_RS09395 0.40 +0.8 1,993,484 - ABZR87_RS09395 0.40 -1.0 1,993,493 + ABZR87_RS09395 0.41 +1.2 1,993,494 - ABZR87_RS09395 0.41 -0.2 1,993,494 - ABZR87_RS09395 0.41 +0.8 1,993,494 - ABZR87_RS09395 0.41 +0.9 1,993,494 - ABZR87_RS09395 0.41 +0.1 1,993,526 - ABZR87_RS09395 0.44 -0.2 1,993,546 + ABZR87_RS09395 0.46 -1.8 1,993,546 + ABZR87_RS09395 0.46 -0.0 1,993,547 - ABZR87_RS09395 0.46 -0.6 1,993,547 - ABZR87_RS09395 0.46 -0.1 1,993,547 - ABZR87_RS09395 0.46 -0.7 1,993,547 - ABZR87_RS09395 0.46 +0.4 1,993,615 + ABZR87_RS09395 0.53 -0.2 1,993,615 + ABZR87_RS09395 0.53 -1.0 1,993,615 + ABZR87_RS09395 0.53 +0.4 1,993,615 + ABZR87_RS09395 0.53 +0.2 1,993,617 + ABZR87_RS09395 0.53 +0.5 1,993,617 + ABZR87_RS09395 0.53 +0.6 1,993,617 + ABZR87_RS09395 0.53 -1.0 1,993,617 + ABZR87_RS09395 0.53 +0.0 1,993,618 - ABZR87_RS09395 0.53 +0.8 1,993,618 - ABZR87_RS09395 0.53 +0.3 1,993,618 - ABZR87_RS09395 0.53 -1.0 1,993,618 - ABZR87_RS09395 0.53 +0.3 1,993,618 - ABZR87_RS09395 0.53 +0.5 1,993,618 - ABZR87_RS09395 0.53 +0.2 1,993,692 + ABZR87_RS09395 0.60 +0.3 1,993,692 + ABZR87_RS09395 0.60 +0.5 1,993,693 - ABZR87_RS09395 0.60 +0.1 1,993,693 - ABZR87_RS09395 0.60 +0.2 1,993,693 - ABZR87_RS09395 0.60 +0.0 1,993,759 - ABZR87_RS09395 0.67 -0.6 1,993,759 - ABZR87_RS09395 0.67 +0.9 1,993,759 - ABZR87_RS09395 0.67 +0.7 1,993,828 + ABZR87_RS09395 0.73 -2.6 1,993,829 - ABZR87_RS09395 0.74 -1.1 1,993,851 + ABZR87_RS09395 0.76 -0.1 1,993,852 - ABZR87_RS09395 0.76 -0.8 1,993,852 - ABZR87_RS09395 0.76 -1.2 1,993,978 + ABZR87_RS09395 0.88 -1.0 1,994,001 + -1.0 1,994,001 + -1.5 1,994,002 - +0.8 1,994,004 + -0.1 1,994,023 + -0.2 1,994,026 + +0.1 1,994,026 + +0.2 1,994,026 + +0.7 1,994,026 + -0.9 1,994,027 - +0.8 1,994,027 - -1.9 1,994,064 + -0.1 1,994,064 + +0.7 1,994,064 + +0.5 1,994,065 - -0.7 1,994,065 - -0.5 1,994,065 - +0.1 1,994,089 + -0.4 1,994,089 + +0.4 1,994,089 + +0.5 1,994,090 - -0.0 1,994,090 - -0.2 1,994,090 - -0.2 1,994,090 - +1.3 1,994,090 - -0.5 1,994,095 + -0.6 1,994,095 + -0.7 1,994,096 - -0.5 1,994,096 - +0.4 1,994,096 - +1.4 1,994,138 + -0.3 1,994,139 - +0.1 1,994,345 + +0.1 1,994,345 + -0.0 1,994,345 + -1.6 1,994,345 + +0.9 1,994,345 + -0.0 1,994,345 + -0.4 1,994,345 + -0.5 1,994,345 + -0.5 1,994,345 + -0.2 1,994,346 - -0.7 1,994,346 - -0.2 1,994,346 - -0.6 1,994,346 - -0.8 1,994,346 - -0.4 1,994,346 - +0.8 1,994,346 - +1.5 1,994,347 + +0.1 1,994,347 + +1.1 1,994,347 + -2.1 1,994,347 + +0.5 1,994,347 + -0.4 1,994,347 + +0.6 1,994,347 + +1.9 1,994,347 + -0.3 1,994,347 + -1.0 1,994,348 - +0.3 1,994,348 - +0.7 1,994,348 - -0.5 1,994,348 - +0.7 1,994,348 - +0.0 1,994,393 - +0.0 1,994,400 + +1.0 1,994,423 + -1.1 1,994,510 + -0.7 1,994,511 - +0.4 1,994,511 - +1.3 1,994,521 + -1.0 1,994,522 - +0.4 1,994,558 - +0.8 1,994,567 + -0.3 1,994,568 - +0.7 1,994,625 + +0.3 1,994,625 + -1.3 1,994,625 + +0.3 1,994,625 + -1.0 1,994,625 + -0.4 1,994,625 + -0.5 1,994,625 + +0.4 1,994,625 + +0.4 1,994,626 + +0.1 1,994,626 - -1.5 1,994,626 - +1.2 1,994,626 - +2.0 1,994,626 - +1.1 1,994,629 + -1.0 1,994,629 + +0.9 1,994,629 + -2.1 1,994,629 + -0.9 1,994,629 + +0.1 1,994,629 + -0.8 1,994,633 + +0.1 1,994,633 + +0.9 1,994,634 - -1.9 1,994,634 - +1.1 1,994,722 + +0.1 1,994,722 + -0.0 1,994,723 - +1.3 1,994,723 - +1.1 1,994,754 + +0.5 1,994,754 + -0.2 1,994,754 + +0.2 1,994,755 - +1.3 1,994,755 - -0.3 1,994,800 + -2.0 1,994,801 - +0.9 1,994,859 - +0.3 1,994,859 - -2.3 1,994,859 - -1.3 1,994,862 + -1.7 1,994,862 + -2.2 1,994,862 + -2.2 1,994,866 + -1.3 1,994,866 + -0.7 1,994,866 + -1.3 1,994,866 + -0.3 1,994,866 + -2.0 1,994,866 + -1.3 1,994,867 - -1.3 1,994,867 - -0.7 1,994,913 + -0.7 1,994,944 - -1.3 1,994,960 + -0.5 1,994,960 + -2.0 1,994,961 - -2.7 1,994,967 + -1.3 1,994,968 - -1.5 1,994,968 - -1.5 1,994,976 + +1.3 1,994,976 + -0.5 1,995,004 - -1.9 1,995,075 + -1.0 1,995,075 + -3.3 1,995,075 + -1.0 1,995,075 + -1.5 1,995,179 + -0.7 1,995,180 - -0.1 1,995,180 - +0.6 1,995,180 - +0.3 1,995,186 + +0.3 1,995,186 + -1.2 1,995,186 + +1.3 1,995,186 + -1.0 1,995,186 + -1.0 1,995,186 + -0.7 1,995,187 - -0.4 1,995,196 - +0.1
Or see this region's nucleotide sequence