Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04805 and ABZR87_RS04810 are separated by 125 nucleotides ABZR87_RS04810 and ABZR87_RS04815 are separated by 223 nucleotides
ABZR87_RS04805: ABZR87_RS04805 - thiamine phosphate synthase, at 1,007,351 to 1,008,505
_RS04805
ABZR87_RS04810: ABZR87_RS04810 - VOC family protein, at 1,008,631 to 1,009,110
_RS04810
ABZR87_RS04815: ABZR87_RS04815 - DUF3274 domain-containing protein, at 1,009,334 to 1,011,727
_RS04815
Position (kb)
1008
1009
1010 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1008.462 kb on + strand at 1008.462 kb on + strand at 1008.462 kb on + strand at 1008.503 kb on + strand at 1008.504 kb on - strand at 1008.504 kb on - strand at 1008.504 kb on - strand at 1008.562 kb on + strand at 1008.562 kb on + strand at 1008.563 kb on - strand at 1008.563 kb on - strand at 1008.563 kb on - strand at 1008.658 kb on + strand at 1008.715 kb on + strand, within ABZR87_RS04810 at 1008.715 kb on + strand, within ABZR87_RS04810 at 1008.715 kb on + strand, within ABZR87_RS04810 at 1008.715 kb on + strand, within ABZR87_RS04810 at 1008.715 kb on + strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.716 kb on - strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.717 kb on + strand, within ABZR87_RS04810 at 1008.718 kb on - strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.889 kb on + strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.890 kb on - strand, within ABZR87_RS04810 at 1008.894 kb on - strand, within ABZR87_RS04810 at 1008.894 kb on - strand, within ABZR87_RS04810 at 1008.894 kb on - strand, within ABZR87_RS04810 at 1008.894 kb on - strand, within ABZR87_RS04810 at 1008.970 kb on + strand, within ABZR87_RS04810 at 1008.971 kb on - strand, within ABZR87_RS04810 at 1008.971 kb on - strand, within ABZR87_RS04810 at 1009.195 kb on + strand at 1009.195 kb on + strand at 1009.196 kb on - strand at 1009.196 kb on - strand at 1009.196 kb on - strand at 1009.196 kb on - strand at 1009.213 kb on + strand at 1009.213 kb on + strand at 1009.213 kb on + strand at 1009.213 kb on + strand at 1009.214 kb on - strand at 1009.214 kb on - strand at 1009.214 kb on - strand at 1009.340 kb on - strand at 1009.340 kb on - strand at 1009.366 kb on + strand at 1009.394 kb on + strand at 1009.395 kb on - strand at 1009.623 kb on - strand, within ABZR87_RS04815 at 1009.623 kb on - strand, within ABZR87_RS04815 at 1009.624 kb on + strand, within ABZR87_RS04815 at 1009.625 kb on - strand, within ABZR87_RS04815 at 1009.649 kb on + strand, within ABZR87_RS04815 at 1009.649 kb on + strand, within ABZR87_RS04815 at 1009.649 kb on + strand, within ABZR87_RS04815 at 1009.650 kb on - strand, within ABZR87_RS04815 at 1009.650 kb on - strand, within ABZR87_RS04815 at 1009.650 kb on - strand, within ABZR87_RS04815 at 1009.650 kb on - strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.651 kb on + strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.652 kb on - strand, within ABZR87_RS04815 at 1009.653 kb on + strand, within ABZR87_RS04815 at 1009.653 kb on + strand, within ABZR87_RS04815 at 1009.654 kb on - strand, within ABZR87_RS04815 at 1009.654 kb on - strand, within ABZR87_RS04815 at 1009.654 kb on - strand, within ABZR87_RS04815 at 1009.730 kb on + strand, within ABZR87_RS04815 at 1009.730 kb on + strand, within ABZR87_RS04815 at 1009.804 kb on + strand, within ABZR87_RS04815 at 1009.804 kb on + strand, within ABZR87_RS04815 at 1009.804 kb on + strand, within ABZR87_RS04815 at 1009.804 kb on + strand, within ABZR87_RS04815 at 1009.955 kb on + strand, within ABZR87_RS04815 at 1009.955 kb on + strand, within ABZR87_RS04815 at 1009.956 kb on - strand, within ABZR87_RS04815 at 1009.956 kb on - strand, within ABZR87_RS04815 at 1009.976 kb on + strand, within ABZR87_RS04815 at 1009.976 kb on + strand, within ABZR87_RS04815 at 1009.976 kb on + strand, within ABZR87_RS04815 at 1010.080 kb on + strand, within ABZR87_RS04815
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 1,008,462 + +0.1 1,008,462 + +0.8 1,008,462 + -1.5 1,008,503 + -0.1 1,008,504 - +0.1 1,008,504 - -1.0 1,008,504 - +0.1 1,008,562 + -0.3 1,008,562 + -0.9 1,008,563 - -0.3 1,008,563 - +0.7 1,008,563 - +0.3 1,008,658 + -0.0 1,008,715 + ABZR87_RS04810 0.17 -1.1 1,008,715 + ABZR87_RS04810 0.17 +0.2 1,008,715 + ABZR87_RS04810 0.17 -1.6 1,008,715 + ABZR87_RS04810 0.17 +0.3 1,008,715 + ABZR87_RS04810 0.17 -0.1 1,008,716 - ABZR87_RS04810 0.18 -1.5 1,008,716 - ABZR87_RS04810 0.18 -0.4 1,008,716 - ABZR87_RS04810 0.18 +0.1 1,008,716 - ABZR87_RS04810 0.18 -0.1 1,008,716 - ABZR87_RS04810 0.18 -0.0 1,008,716 - ABZR87_RS04810 0.18 +0.8 1,008,716 - ABZR87_RS04810 0.18 -0.9 1,008,716 - ABZR87_RS04810 0.18 -0.3 1,008,716 - ABZR87_RS04810 0.18 -0.3 1,008,717 + ABZR87_RS04810 0.18 +0.8 1,008,717 + ABZR87_RS04810 0.18 +0.1 1,008,717 + ABZR87_RS04810 0.18 +0.2 1,008,717 + ABZR87_RS04810 0.18 +0.5 1,008,717 + ABZR87_RS04810 0.18 +0.9 1,008,717 + ABZR87_RS04810 0.18 +0.5 1,008,718 - ABZR87_RS04810 0.18 +0.2 1,008,889 + ABZR87_RS04810 0.54 +0.1 1,008,889 + ABZR87_RS04810 0.54 -0.7 1,008,889 + ABZR87_RS04810 0.54 -0.4 1,008,889 + ABZR87_RS04810 0.54 +0.2 1,008,889 + ABZR87_RS04810 0.54 +0.8 1,008,889 + ABZR87_RS04810 0.54 -0.7 1,008,889 + ABZR87_RS04810 0.54 -0.3 1,008,889 + ABZR87_RS04810 0.54 -0.2 1,008,889 + ABZR87_RS04810 0.54 +0.4 1,008,890 - ABZR87_RS04810 0.54 -0.3 1,008,890 - ABZR87_RS04810 0.54 -0.0 1,008,890 - ABZR87_RS04810 0.54 -0.0 1,008,890 - ABZR87_RS04810 0.54 +0.1 1,008,890 - ABZR87_RS04810 0.54 +0.9 1,008,890 - ABZR87_RS04810 0.54 +0.5 1,008,890 - ABZR87_RS04810 0.54 -0.3 1,008,890 - ABZR87_RS04810 0.54 -0.6 1,008,890 - ABZR87_RS04810 0.54 +0.1 1,008,894 - ABZR87_RS04810 0.55 +1.3 1,008,894 - ABZR87_RS04810 0.55 -0.5 1,008,894 - ABZR87_RS04810 0.55 +1.7 1,008,894 - ABZR87_RS04810 0.55 -0.7 1,008,970 + ABZR87_RS04810 0.71 -1.1 1,008,971 - ABZR87_RS04810 0.71 -0.0 1,008,971 - ABZR87_RS04810 0.71 -1.1 1,009,195 + -0.2 1,009,195 + +1.1 1,009,196 - -1.7 1,009,196 - -0.3 1,009,196 - -0.9 1,009,196 - +0.3 1,009,213 + +0.7 1,009,213 + +0.9 1,009,213 + -2.4 1,009,213 + -0.0 1,009,214 - -0.4 1,009,214 - +0.2 1,009,214 - +0.8 1,009,340 - +0.9 1,009,340 - -0.7 1,009,366 + +0.2 1,009,394 + -2.8 1,009,395 - +0.2 1,009,623 - ABZR87_RS04815 0.12 +0.5 1,009,623 - ABZR87_RS04815 0.12 -0.5 1,009,624 + ABZR87_RS04815 0.12 +0.0 1,009,625 - ABZR87_RS04815 0.12 -0.2 1,009,649 + ABZR87_RS04815 0.13 +0.1 1,009,649 + ABZR87_RS04815 0.13 -1.5 1,009,649 + ABZR87_RS04815 0.13 -1.2 1,009,650 - ABZR87_RS04815 0.13 -0.5 1,009,650 - ABZR87_RS04815 0.13 +0.1 1,009,650 - ABZR87_RS04815 0.13 +0.6 1,009,650 - ABZR87_RS04815 0.13 -0.9 1,009,651 + ABZR87_RS04815 0.13 -0.0 1,009,651 + ABZR87_RS04815 0.13 +0.6 1,009,651 + ABZR87_RS04815 0.13 -0.5 1,009,651 + ABZR87_RS04815 0.13 -3.1 1,009,651 + ABZR87_RS04815 0.13 +0.7 1,009,651 + ABZR87_RS04815 0.13 +1.7 1,009,651 + ABZR87_RS04815 0.13 -0.4 1,009,651 + ABZR87_RS04815 0.13 -0.5 1,009,651 + ABZR87_RS04815 0.13 -1.5 1,009,651 + ABZR87_RS04815 0.13 -0.3 1,009,651 + ABZR87_RS04815 0.13 -0.7 1,009,651 + ABZR87_RS04815 0.13 -1.1 1,009,651 + ABZR87_RS04815 0.13 +1.5 1,009,651 + ABZR87_RS04815 0.13 +0.3 1,009,652 - ABZR87_RS04815 0.13 -0.1 1,009,652 - ABZR87_RS04815 0.13 -0.2 1,009,652 - ABZR87_RS04815 0.13 +0.1 1,009,652 - ABZR87_RS04815 0.13 +1.2 1,009,652 - ABZR87_RS04815 0.13 -0.2 1,009,652 - ABZR87_RS04815 0.13 -1.3 1,009,652 - ABZR87_RS04815 0.13 -1.2 1,009,653 + ABZR87_RS04815 0.13 +0.2 1,009,653 + ABZR87_RS04815 0.13 -0.4 1,009,654 - ABZR87_RS04815 0.13 +0.3 1,009,654 - ABZR87_RS04815 0.13 -2.2 1,009,654 - ABZR87_RS04815 0.13 +0.7 1,009,730 + ABZR87_RS04815 0.17 +0.8 1,009,730 + ABZR87_RS04815 0.17 +1.0 1,009,804 + ABZR87_RS04815 0.20 +1.4 1,009,804 + ABZR87_RS04815 0.20 +0.3 1,009,804 + ABZR87_RS04815 0.20 +1.5 1,009,804 + ABZR87_RS04815 0.20 +0.9 1,009,955 + ABZR87_RS04815 0.26 +0.3 1,009,955 + ABZR87_RS04815 0.26 +0.9 1,009,956 - ABZR87_RS04815 0.26 -0.2 1,009,956 - ABZR87_RS04815 0.26 +0.1 1,009,976 + ABZR87_RS04815 0.27 -1.0 1,009,976 + ABZR87_RS04815 0.27 -0.0 1,009,976 + ABZR87_RS04815 0.27 +0.6 1,010,080 + ABZR87_RS04815 0.31 -0.4
Or see this region's nucleotide sequence