Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS02095

Experiment: Heptanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS02090 and ABZR87_RS02095 are separated by 613 nucleotidesABZR87_RS02095 and ABZR87_RS02100 are separated by 83 nucleotidesABZR87_RS02100 and ABZR87_RS02105 are separated by 4 nucleotides ABZR87_RS02090: ABZR87_RS02090 - 16S ribosomal RNA, at 449,499 to 451,038 _RS02090 ABZR87_RS02095: ABZR87_RS02095 - enoyl-CoA hydratase, at 451,652 to 452,428 _RS02095 ABZR87_RS02100: ABZR87_RS02100 - 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG, at 452,512 to 453,300 _RS02100 ABZR87_RS02105: ABZR87_RS02105 - hydroxyphenylacetyl-CoA thioesterase PaaI, at 453,305 to 453,772 _RS02105 Position (kb) 451 452 453Strain fitness (log2 ratio) -2 -1 0 1 2at 451.365 kb on - strandat 451.365 kb on - strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.469 kb on + strandat 451.470 kb on - strandat 451.470 kb on - strandat 451.470 kb on - strandat 451.470 kb on - strandat 451.470 kb on - strandat 451.471 kb on + strandat 451.472 kb on - strandat 451.537 kb on - strandat 451.553 kb on + strandat 451.553 kb on + strandat 451.553 kb on + strandat 451.553 kb on + strandat 451.553 kb on + strandat 451.554 kb on - strandat 451.554 kb on - strandat 451.554 kb on - strandat 451.602 kb on - strandat 451.653 kb on + strandat 451.782 kb on + strand, within ABZR87_RS02095at 451.782 kb on + strand, within ABZR87_RS02095at 451.783 kb on - strand, within ABZR87_RS02095at 451.783 kb on - strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.181 kb on + strand, within ABZR87_RS02095at 452.182 kb on - strand, within ABZR87_RS02095at 452.182 kb on - strand, within ABZR87_RS02095at 452.191 kb on + strand, within ABZR87_RS02095at 452.191 kb on + strand, within ABZR87_RS02095at 452.191 kb on + strand, within ABZR87_RS02095at 452.191 kb on + strand, within ABZR87_RS02095at 452.192 kb on - strand, within ABZR87_RS02095at 452.192 kb on - strand, within ABZR87_RS02095at 452.192 kb on - strand, within ABZR87_RS02095at 452.192 kb on - strand, within ABZR87_RS02095at 452.192 kb on - strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.193 kb on + strand, within ABZR87_RS02095at 452.194 kb on - strand, within ABZR87_RS02095at 452.194 kb on - strand, within ABZR87_RS02095at 452.194 kb on - strand, within ABZR87_RS02095at 452.194 kb on - strand, within ABZR87_RS02095at 452.194 kb on - strand, within ABZR87_RS02095at 452.211 kb on + strand, within ABZR87_RS02095at 452.211 kb on + strand, within ABZR87_RS02095at 452.212 kb on - strand, within ABZR87_RS02095at 452.267 kb on - strand, within ABZR87_RS02095at 452.377 kb on + strandat 452.377 kb on + strandat 452.377 kb on + strandat 452.378 kb on - strandat 452.378 kb on - strandat 452.378 kb on - strandat 452.422 kb on - strandat 452.422 kb on - strandat 452.452 kb on + strandat 452.452 kb on + strandat 452.918 kb on + strand, within ABZR87_RS02100at 452.918 kb on + strand, within ABZR87_RS02100at 452.918 kb on + strand, within ABZR87_RS02100at 452.919 kb on - strand, within ABZR87_RS02100at 452.919 kb on - strand, within ABZR87_RS02100at 452.919 kb on - strand, within ABZR87_RS02100at 453.241 kb on + strandat 453.278 kb on + strandat 453.278 kb on + strandat 453.298 kb on + strandat 453.298 kb on + strandat 453.298 kb on + strandat 453.298 kb on + strandat 453.299 kb on - strandat 453.299 kb on - strandat 453.299 kb on - strandat 453.299 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Heptanoic (C)
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451,365 - -0.4
451,365 - -0.0
451,469 + -1.1
451,469 + -0.2
451,469 + -0.6
451,469 + -0.7
451,469 + -2.1
451,469 + -0.3
451,469 + -0.4
451,469 + +0.2
451,470 - -0.5
451,470 - -0.5
451,470 - +0.4
451,470 - -0.5
451,470 - -0.8
451,471 + +0.5
451,472 - -0.5
451,537 - +1.1
451,553 + -0.6
451,553 + +0.3
451,553 + -2.4
451,553 + -2.2
451,553 + -0.1
451,554 - -2.6
451,554 - -0.6
451,554 - -0.1
451,602 - -0.1
451,653 + +0.5
451,782 + ABZR87_RS02095 0.17 -1.8
451,782 + ABZR87_RS02095 0.17 -0.0
451,783 - ABZR87_RS02095 0.17 -1.0
451,783 - ABZR87_RS02095 0.17 +0.5
452,181 + ABZR87_RS02095 0.68 -1.0
452,181 + ABZR87_RS02095 0.68 -0.6
452,181 + ABZR87_RS02095 0.68 +0.7
452,181 + ABZR87_RS02095 0.68 +0.7
452,181 + ABZR87_RS02095 0.68 +0.3
452,181 + ABZR87_RS02095 0.68 -1.5
452,181 + ABZR87_RS02095 0.68 -1.4
452,181 + ABZR87_RS02095 0.68 +0.1
452,181 + ABZR87_RS02095 0.68 -1.6
452,182 - ABZR87_RS02095 0.68 +0.2
452,182 - ABZR87_RS02095 0.68 -0.0
452,191 + ABZR87_RS02095 0.69 +1.0
452,191 + ABZR87_RS02095 0.69 +1.6
452,191 + ABZR87_RS02095 0.69 +0.1
452,191 + ABZR87_RS02095 0.69 -0.8
452,192 - ABZR87_RS02095 0.69 +1.3
452,192 - ABZR87_RS02095 0.69 -1.9
452,192 - ABZR87_RS02095 0.69 -0.0
452,192 - ABZR87_RS02095 0.69 +0.1
452,192 - ABZR87_RS02095 0.69 -1.1
452,193 + ABZR87_RS02095 0.70 +2.7
452,193 + ABZR87_RS02095 0.70 -1.5
452,193 + ABZR87_RS02095 0.70 -0.7
452,193 + ABZR87_RS02095 0.70 -0.0
452,193 + ABZR87_RS02095 0.70 +0.0
452,193 + ABZR87_RS02095 0.70 +0.6
452,194 - ABZR87_RS02095 0.70 +0.4
452,194 - ABZR87_RS02095 0.70 +0.1
452,194 - ABZR87_RS02095 0.70 -1.7
452,194 - ABZR87_RS02095 0.70 +0.7
452,194 - ABZR87_RS02095 0.70 +1.2
452,211 + ABZR87_RS02095 0.72 +0.5
452,211 + ABZR87_RS02095 0.72 -0.9
452,212 - ABZR87_RS02095 0.72 +0.6
452,267 - ABZR87_RS02095 0.79 -0.6
452,377 + -1.2
452,377 + -0.5
452,377 + +0.5
452,378 - -1.3
452,378 - -0.2
452,378 - -0.2
452,422 - -1.6
452,422 - +0.2
452,452 + -0.1
452,452 + -2.6
452,918 + ABZR87_RS02100 0.51 -2.6
452,918 + ABZR87_RS02100 0.51 +0.1
452,918 + ABZR87_RS02100 0.51 -1.2
452,919 - ABZR87_RS02100 0.52 -0.5
452,919 - ABZR87_RS02100 0.52 -0.6
452,919 - ABZR87_RS02100 0.52 +1.1
453,241 + -1.1
453,278 + -2.7
453,278 + -1.7
453,298 + -0.4
453,298 + +0.5
453,298 + +0.3
453,298 + +0.5
453,299 - +1.3
453,299 - +0.6
453,299 - -0.1
453,299 - +0.3

Or see this region's nucleotide sequence