Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21273 and SM_b21274 are separated by 16 nucleotides SM_b21274 and SM_b21275 overlap by 4 nucleotides
SM_b21273: SM_b21273 - spermidineputrescine ABC transporter substrate-binding protein precursor, at 847,044 to 848,066
_b21273
SM_b21274: SM_b21274 - spermidine/putrescine ABC transporter permease, at 848,083 to 848,982
_b21274
SM_b21275: SM_b21275 - spermidineputrescine ABC transporter permease, at 848,979 to 849,758
_b21275
Position (kb) 848
849
850 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 848.120 kb on - strand at 848.120 kb on - strand at 848.151 kb on - strand at 848.468 kb on + strand, within SM_b21274 at 848.488 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.802 kb on + strand, within SM_b21274 at 848.802 kb on + strand, within SM_b21274 at 849.229 kb on - strand, within SM_b21275 at 849.328 kb on + strand, within SM_b21275 at 849.328 kb on + strand, within SM_b21275 at 849.329 kb on - strand, within SM_b21275 at 849.329 kb on - strand, within SM_b21275 at 849.334 kb on - strand, within SM_b21275 at 849.334 kb on - strand, within SM_b21275 at 849.359 kb on + strand, within SM_b21275 at 849.359 kb on + strand, within SM_b21275 at 849.642 kb on + strand, within SM_b21275 at 849.643 kb on - strand, within SM_b21275 at 849.643 kb on - strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.750 kb on + strand at 849.796 kb on + strand at 849.936 kb on + strand at 849.937 kb on - strand at 849.960 kb on + strand at 849.961 kb on - strand at 850.009 kb on + strand at 850.010 kb on - strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.425 kb on + strand at 850.648 kb on + strand at 850.648 kb on + strand at 850.660 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 848,120 - -0.1 848,120 - -0.6 848,151 - +0.1 848,468 + SM_b21274 0.43 -0.4 848,488 + SM_b21274 0.45 +0.4 848,800 + SM_b21274 0.80 -2.8 848,800 + SM_b21274 0.80 -0.5 848,800 + SM_b21274 0.80 +0.1 848,800 + SM_b21274 0.80 +0.8 848,801 - SM_b21274 0.80 +0.3 848,801 - SM_b21274 0.80 -0.4 848,801 - SM_b21274 0.80 -0.2 848,801 - SM_b21274 0.80 -0.6 848,801 - SM_b21274 0.80 +0.7 848,801 - SM_b21274 0.80 +0.8 848,801 - SM_b21274 0.80 -0.2 848,801 - SM_b21274 0.80 -0.2 848,801 - SM_b21274 0.80 -0.2 848,801 - SM_b21274 0.80 -0.5 848,801 - SM_b21274 0.80 +0.5 848,802 + SM_b21274 0.80 +0.5 848,802 + SM_b21274 0.80 +0.4 849,229 - SM_b21275 0.32 +0.2 849,328 + SM_b21275 0.45 -0.2 849,328 + SM_b21275 0.45 -0.0 849,329 - SM_b21275 0.45 -0.1 849,329 - SM_b21275 0.45 -0.8 849,334 - SM_b21275 0.46 +0.7 849,334 - SM_b21275 0.46 -1.9 849,359 + SM_b21275 0.49 -0.3 849,359 + SM_b21275 0.49 +1.5 849,642 + SM_b21275 0.85 +0.2 849,643 - SM_b21275 0.85 +0.5 849,643 - SM_b21275 0.85 -0.3 849,657 + SM_b21275 0.87 +0.4 849,657 + SM_b21275 0.87 +1.0 849,657 + SM_b21275 0.87 +1.1 849,658 - SM_b21275 0.87 +0.6 849,658 - SM_b21275 0.87 +0.7 849,658 - SM_b21275 0.87 +0.2 849,658 - SM_b21275 0.87 -1.0 849,658 - SM_b21275 0.87 +0.1 849,750 + -0.2 849,796 + -0.7 849,936 + +0.2 849,937 - +1.5 849,960 + -0.4 849,961 - +0.1 850,009 + -0.6 850,010 - +0.5 850,423 + +1.5 850,423 + -0.4 850,423 + +0.1 850,424 - -1.0 850,424 - -0.3 850,424 - -0.3 850,424 - +0.1 850,425 + -0.3 850,648 + +0.2 850,648 + +0.6 850,660 - +0.6
Or see this region's nucleotide sequence