Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS33735

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS33730 and AZOBR_RS33735 are separated by 100 nucleotides AZOBR_RS33730: AZOBR_RS33730 - hypothetical protein, at 96,310 to 96,828 _RS33730 AZOBR_RS33735: AZOBR_RS33735 - hypothetical protein, at 96,929 to 97,936 _RS33735 Position (kb) 96 97 98Strain fitness (log2 ratio) -3 -2 -1 0 1at 98.106 kb on + strandat 98.127 kb on + strandat 98.127 kb on + strandat 98.127 kb on + strandat 98.128 kb on - strandat 98.128 kb on - strandat 98.128 kb on - strandat 98.128 kb on - strandat 98.250 kb on + strandat 98.250 kb on + strandat 98.250 kb on + strandat 98.589 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI
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98,106 + -0.4
98,127 + -0.1
98,127 + +1.2
98,127 + -0.9
98,128 - +0.3
98,128 - +0.9
98,128 - +0.5
98,128 - -0.8
98,250 + -0.4
98,250 + -0.1
98,250 + -2.9
98,589 + +0.2

Or see this region's nucleotide sequence