Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18505 and AZOBR_RS18510 are separated by 965 nucleotides
AZOBR_RS18505: AZOBR_RS18505 - hypothetical protein, at 920,822 to 921,049
_RS18505
AZOBR_RS18510: AZOBR_RS18510 - plasmid replication protein, at 922,015 to 922,944
_RS18510
Position (kb) 922
923 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.069 kb on + strand at 921.070 kb on - strand at 921.070 kb on - strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.274 kb on - strand at 921.274 kb on - strand at 921.276 kb on + strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.327 kb on + strand at 921.327 kb on + strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.330 kb on + strand at 921.330 kb on + strand at 921.331 kb on - strand at 921.331 kb on - strand at 921.390 kb on + strand at 921.391 kb on - strand at 921.391 kb on - strand at 921.459 kb on + strand at 921.460 kb on - strand at 921.460 kb on - strand at 921.460 kb on - strand at 921.531 kb on + strand at 921.531 kb on + strand at 921.532 kb on - strand at 921.636 kb on + strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.688 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.820 kb on - strand at 923.910 kb on + strand at 923.911 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI remove 921,036 + -0.8 921,036 + +1.3 921,036 + -3.1 921,036 - -0.6 921,037 - +1.3 921,037 - +0.3 921,037 - -0.1 921,069 + -0.0 921,070 - -0.8 921,070 - +1.6 921,159 + -0.2 921,159 + -2.5 921,159 + -0.9 921,160 - +0.4 921,160 - +1.6 921,160 - -0.5 921,160 - +0.0 921,160 - +1.6 921,160 - -0.6 921,160 - +0.3 921,196 - +1.5 921,196 - +0.2 921,196 - -1.4 921,196 - +1.1 921,273 + -3.2 921,273 + -0.0 921,273 + -1.3 921,273 + -1.1 921,274 - +0.4 921,274 - -0.1 921,276 + -1.1 921,277 - +1.1 921,277 - -1.0 921,277 - -0.6 921,277 - -0.4 921,327 + +0.3 921,327 + +0.1 921,328 - -1.5 921,328 - -0.6 921,328 - -1.4 921,328 - -0.5 921,328 - -0.1 921,328 - +0.8 921,330 + +0.9 921,330 + +0.9 921,331 - -1.1 921,331 - -0.3 921,390 + +0.4 921,391 - -1.2 921,391 - -2.4 921,459 + -0.4 921,460 - +0.2 921,460 - +0.4 921,460 - -0.4 921,531 + +1.7 921,531 + +0.1 921,532 - -0.9 921,636 + -0.1 921,637 - +0.6 921,637 - +0.3 921,637 - +1.4 921,637 - -0.1 921,637 - +1.2 921,688 - -2.4 921,748 - -2.7 921,748 - +0.1 921,748 - -1.2 921,748 - -1.3 921,820 - -2.6 923,910 + -0.1 923,911 - +0.9
Or see this region's nucleotide sequence