Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09015 and ABZR87_RS09020 are separated by 29 nucleotides ABZR87_RS09020 and ABZR87_RS09025 are separated by 58 nucleotides
ABZR87_RS09015: ABZR87_RS09015 - TIM barrel protein, at 1,911,417 to 1,912,187
_RS09015
ABZR87_RS09020: ABZR87_RS09020 - sugar kinase, at 1,912,217 to 1,913,206
_RS09020
ABZR87_RS09025: ABZR87_RS09025 - MFS transporter, at 1,913,265 to 1,914,545
_RS09025
Position (kb)
1912
1913
1914 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1911.272 kb on + strand at 1911.279 kb on - strand at 1911.344 kb on + strand at 1911.346 kb on + strand at 1911.346 kb on + strand at 1911.486 kb on + strand at 1911.486 kb on + strand at 1911.486 kb on + strand at 1911.486 kb on + strand at 1911.486 kb on + strand at 1911.486 kb on + strand at 1911.487 kb on - strand at 1911.487 kb on - strand at 1911.487 kb on - strand at 1911.487 kb on - strand at 1911.487 kb on - strand at 1911.612 kb on + strand, within ABZR87_RS09015 at 1911.614 kb on - strand, within ABZR87_RS09015 at 1911.631 kb on - strand, within ABZR87_RS09015 at 1911.651 kb on + strand, within ABZR87_RS09015 at 1911.984 kb on + strand, within ABZR87_RS09015 at 1911.984 kb on + strand, within ABZR87_RS09015 at 1911.985 kb on - strand, within ABZR87_RS09015 at 1911.985 kb on - strand, within ABZR87_RS09015 at 1911.993 kb on + strand, within ABZR87_RS09015 at 1911.993 kb on + strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1911.994 kb on - strand, within ABZR87_RS09015 at 1912.103 kb on - strand, within ABZR87_RS09015 at 1912.103 kb on - strand, within ABZR87_RS09015 at 1912.128 kb on - strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.212 kb on + strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.213 kb on - strand at 1912.225 kb on + strand at 1912.225 kb on + strand at 1912.225 kb on + strand at 1912.226 kb on - strand at 1912.226 kb on - strand at 1912.226 kb on - strand at 1912.226 kb on - strand at 1912.244 kb on + strand at 1912.245 kb on - strand at 1912.245 kb on - strand at 1912.245 kb on - strand at 1912.245 kb on - strand at 1912.245 kb on - strand at 1912.245 kb on - strand at 1912.379 kb on + strand, within ABZR87_RS09020 at 1912.379 kb on + strand, within ABZR87_RS09020 at 1912.380 kb on - strand, within ABZR87_RS09020 at 1912.380 kb on - strand, within ABZR87_RS09020 at 1912.380 kb on - strand, within ABZR87_RS09020 at 1912.415 kb on + strand, within ABZR87_RS09020 at 1912.415 kb on + strand, within ABZR87_RS09020 at 1912.415 kb on + strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.416 kb on - strand, within ABZR87_RS09020 at 1912.461 kb on + strand, within ABZR87_RS09020 at 1912.462 kb on - strand, within ABZR87_RS09020 at 1912.479 kb on - strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.538 kb on + strand, within ABZR87_RS09020 at 1912.539 kb on - strand, within ABZR87_RS09020 at 1912.546 kb on + strand, within ABZR87_RS09020 at 1912.583 kb on + strand, within ABZR87_RS09020 at 1912.583 kb on + strand, within ABZR87_RS09020 at 1912.584 kb on - strand, within ABZR87_RS09020 at 1912.584 kb on - strand, within ABZR87_RS09020 at 1912.584 kb on - strand, within ABZR87_RS09020 at 1912.595 kb on + strand, within ABZR87_RS09020 at 1912.596 kb on - strand, within ABZR87_RS09020 at 1912.596 kb on - strand, within ABZR87_RS09020 at 1912.596 kb on - strand, within ABZR87_RS09020 at 1912.596 kb on - strand, within ABZR87_RS09020 at 1912.841 kb on + strand, within ABZR87_RS09020 at 1912.841 kb on + strand, within ABZR87_RS09020 at 1912.842 kb on - strand, within ABZR87_RS09020 at 1912.872 kb on - strand, within ABZR87_RS09020 at 1912.925 kb on + strand, within ABZR87_RS09020 at 1912.928 kb on + strand, within ABZR87_RS09020 at 1912.928 kb on + strand, within ABZR87_RS09020 at 1912.928 kb on + strand, within ABZR87_RS09020 at 1912.929 kb on - strand, within ABZR87_RS09020 at 1912.929 kb on - strand, within ABZR87_RS09020 at 1913.025 kb on + strand, within ABZR87_RS09020 at 1913.026 kb on - strand, within ABZR87_RS09020 at 1913.246 kb on + strand at 1913.246 kb on + strand at 1913.318 kb on + strand at 1913.325 kb on + strand at 1913.325 kb on + strand at 1913.337 kb on + strand at 1913.338 kb on - strand at 1913.355 kb on + strand at 1913.355 kb on + strand at 1913.355 kb on + strand at 1913.356 kb on - strand at 1913.356 kb on - strand at 1913.356 kb on - strand at 1913.446 kb on - strand, within ABZR87_RS09025 at 1913.475 kb on + strand, within ABZR87_RS09025 at 1913.475 kb on + strand, within ABZR87_RS09025 at 1913.475 kb on + strand, within ABZR87_RS09025 at 1913.476 kb on - strand, within ABZR87_RS09025 at 1913.476 kb on - strand, within ABZR87_RS09025 at 1913.476 kb on - strand, within ABZR87_RS09025 at 1913.654 kb on + strand, within ABZR87_RS09025 at 1913.682 kb on - strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.932 kb on - strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.980 kb on - strand, within ABZR87_RS09025 at 1913.980 kb on - strand, within ABZR87_RS09025 at 1914.003 kb on + strand, within ABZR87_RS09025 at 1914.003 kb on + strand, within ABZR87_RS09025 at 1914.004 kb on - strand, within ABZR87_RS09025 at 1914.090 kb on + strand, within ABZR87_RS09025 at 1914.090 kb on + strand, within ABZR87_RS09025 at 1914.091 kb on - strand, within ABZR87_RS09025 at 1914.091 kb on - strand, within ABZR87_RS09025
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 1,911,272 + +0.8 1,911,279 - +0.1 1,911,344 + +0.2 1,911,346 + +0.5 1,911,346 + -0.1 1,911,486 + +0.1 1,911,486 + -0.9 1,911,486 + +1.1 1,911,486 + +0.2 1,911,486 + -0.2 1,911,486 + +2.0 1,911,487 - -1.8 1,911,487 - -0.2 1,911,487 - +0.6 1,911,487 - -0.6 1,911,487 - +0.3 1,911,612 + ABZR87_RS09015 0.25 +2.3 1,911,614 - ABZR87_RS09015 0.26 -0.4 1,911,631 - ABZR87_RS09015 0.28 +0.5 1,911,651 + ABZR87_RS09015 0.30 -0.3 1,911,984 + ABZR87_RS09015 0.74 -0.6 1,911,984 + ABZR87_RS09015 0.74 -0.8 1,911,985 - ABZR87_RS09015 0.74 -0.1 1,911,985 - ABZR87_RS09015 0.74 -0.9 1,911,993 + ABZR87_RS09015 0.75 +1.3 1,911,993 + ABZR87_RS09015 0.75 +0.2 1,911,994 - ABZR87_RS09015 0.75 -0.1 1,911,994 - ABZR87_RS09015 0.75 -0.3 1,911,994 - ABZR87_RS09015 0.75 -1.1 1,911,994 - ABZR87_RS09015 0.75 +0.2 1,911,994 - ABZR87_RS09015 0.75 -0.8 1,911,994 - ABZR87_RS09015 0.75 -0.5 1,912,103 - ABZR87_RS09015 0.89 +0.8 1,912,103 - ABZR87_RS09015 0.89 +0.2 1,912,128 - +0.1 1,912,212 + +0.2 1,912,212 + -0.9 1,912,212 + -0.5 1,912,212 + +1.0 1,912,212 + +1.0 1,912,212 + -0.5 1,912,212 + -0.3 1,912,212 + +0.4 1,912,213 - -0.2 1,912,213 - +0.9 1,912,213 - -0.1 1,912,213 - -0.1 1,912,213 - -0.2 1,912,213 - +1.2 1,912,213 - +0.4 1,912,213 - +0.0 1,912,225 + -0.3 1,912,225 + -0.2 1,912,225 + +0.7 1,912,226 - +0.9 1,912,226 - +1.0 1,912,226 - -0.9 1,912,226 - -0.4 1,912,244 + +0.5 1,912,245 - +0.8 1,912,245 - +0.0 1,912,245 - +0.9 1,912,245 - +0.2 1,912,245 - +0.7 1,912,245 - -1.1 1,912,379 + ABZR87_RS09020 0.16 +0.7 1,912,379 + ABZR87_RS09020 0.16 -1.2 1,912,380 - ABZR87_RS09020 0.16 +0.4 1,912,380 - ABZR87_RS09020 0.16 -0.3 1,912,380 - ABZR87_RS09020 0.16 -0.2 1,912,415 + ABZR87_RS09020 0.20 +0.7 1,912,415 + ABZR87_RS09020 0.20 +1.0 1,912,415 + ABZR87_RS09020 0.20 -1.0 1,912,416 - ABZR87_RS09020 0.20 +0.3 1,912,416 - ABZR87_RS09020 0.20 +0.2 1,912,416 - ABZR87_RS09020 0.20 -0.5 1,912,416 - ABZR87_RS09020 0.20 -0.8 1,912,416 - ABZR87_RS09020 0.20 +0.1 1,912,416 - ABZR87_RS09020 0.20 -0.1 1,912,416 - ABZR87_RS09020 0.20 -0.4 1,912,461 + ABZR87_RS09020 0.25 -0.2 1,912,462 - ABZR87_RS09020 0.25 +0.3 1,912,479 - ABZR87_RS09020 0.26 +0.3 1,912,538 + ABZR87_RS09020 0.32 -0.5 1,912,538 + ABZR87_RS09020 0.32 +1.1 1,912,538 + ABZR87_RS09020 0.32 -1.6 1,912,538 + ABZR87_RS09020 0.32 +0.6 1,912,538 + ABZR87_RS09020 0.32 -0.4 1,912,538 + ABZR87_RS09020 0.32 +0.1 1,912,539 - ABZR87_RS09020 0.33 -1.4 1,912,546 + ABZR87_RS09020 0.33 +0.0 1,912,583 + ABZR87_RS09020 0.37 -0.7 1,912,583 + ABZR87_RS09020 0.37 +1.1 1,912,584 - ABZR87_RS09020 0.37 +0.7 1,912,584 - ABZR87_RS09020 0.37 +0.4 1,912,584 - ABZR87_RS09020 0.37 +1.6 1,912,595 + ABZR87_RS09020 0.38 +1.3 1,912,596 - ABZR87_RS09020 0.38 -1.4 1,912,596 - ABZR87_RS09020 0.38 -0.3 1,912,596 - ABZR87_RS09020 0.38 +0.1 1,912,596 - ABZR87_RS09020 0.38 +1.0 1,912,841 + ABZR87_RS09020 0.63 +0.3 1,912,841 + ABZR87_RS09020 0.63 -0.0 1,912,842 - ABZR87_RS09020 0.63 -1.6 1,912,872 - ABZR87_RS09020 0.66 +0.8 1,912,925 + ABZR87_RS09020 0.72 +0.1 1,912,928 + ABZR87_RS09020 0.72 -0.6 1,912,928 + ABZR87_RS09020 0.72 +0.9 1,912,928 + ABZR87_RS09020 0.72 -0.8 1,912,929 - ABZR87_RS09020 0.72 +0.1 1,912,929 - ABZR87_RS09020 0.72 +0.7 1,913,025 + ABZR87_RS09020 0.82 -0.1 1,913,026 - ABZR87_RS09020 0.82 +1.0 1,913,246 + +0.1 1,913,246 + -0.0 1,913,318 + -0.2 1,913,325 + -0.3 1,913,325 + +0.9 1,913,337 + -0.0 1,913,338 - -0.8 1,913,355 + +0.2 1,913,355 + +0.2 1,913,355 + -0.1 1,913,356 - +2.2 1,913,356 - -0.0 1,913,356 - -1.6 1,913,446 - ABZR87_RS09025 0.14 +0.4 1,913,475 + ABZR87_RS09025 0.16 +0.4 1,913,475 + ABZR87_RS09025 0.16 -0.5 1,913,475 + ABZR87_RS09025 0.16 -0.5 1,913,476 - ABZR87_RS09025 0.16 +0.1 1,913,476 - ABZR87_RS09025 0.16 -0.3 1,913,476 - ABZR87_RS09025 0.16 +0.9 1,913,654 + ABZR87_RS09025 0.30 -0.3 1,913,682 - ABZR87_RS09025 0.33 -0.2 1,913,768 + ABZR87_RS09025 0.39 -0.3 1,913,768 + ABZR87_RS09025 0.39 -0.9 1,913,768 + ABZR87_RS09025 0.39 -0.5 1,913,768 + ABZR87_RS09025 0.39 -0.1 1,913,768 + ABZR87_RS09025 0.39 -1.1 1,913,769 - ABZR87_RS09025 0.39 +0.4 1,913,769 - ABZR87_RS09025 0.39 -0.6 1,913,769 - ABZR87_RS09025 0.39 -0.1 1,913,769 - ABZR87_RS09025 0.39 -0.4 1,913,769 - ABZR87_RS09025 0.39 -0.5 1,913,769 - ABZR87_RS09025 0.39 +0.2 1,913,932 - ABZR87_RS09025 0.52 -0.1 1,913,979 + ABZR87_RS09025 0.56 -0.6 1,913,979 + ABZR87_RS09025 0.56 -0.1 1,913,979 + ABZR87_RS09025 0.56 +0.1 1,913,980 - ABZR87_RS09025 0.56 -0.3 1,913,980 - ABZR87_RS09025 0.56 +0.0 1,914,003 + ABZR87_RS09025 0.58 -0.8 1,914,003 + ABZR87_RS09025 0.58 -0.8 1,914,004 - ABZR87_RS09025 0.58 -0.6 1,914,090 + ABZR87_RS09025 0.64 -0.5 1,914,090 + ABZR87_RS09025 0.64 -1.3 1,914,091 - ABZR87_RS09025 0.64 -1.6 1,914,091 - ABZR87_RS09025 0.64 -1.0
Or see this region's nucleotide sequence