Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08850 and ABZR87_RS08855 are separated by 537 nucleotides ABZR87_RS08855 and ABZR87_RS08860 are separated by 75 nucleotides
ABZR87_RS08850: ABZR87_RS08850 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 1,879,805 to 1,881,316
_RS08850
ABZR87_RS08855: ABZR87_RS08855 - lytic transglycosylase domain-containing protein, at 1,881,854 to 1,883,044
_RS08855
ABZR87_RS08860: ABZR87_RS08860 - pyridoxal phosphate-dependent aminotransferase, at 1,883,120 to 1,884,304
_RS08860
Position (kb)
1881
1882
1883
1884 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1881.351 kb on + strand at 1881.407 kb on + strand at 1881.429 kb on - strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.479 kb on + strand at 1881.480 kb on - strand at 1881.562 kb on + strand at 1881.562 kb on + strand at 1881.562 kb on + strand at 1881.563 kb on - strand at 1881.563 kb on - strand at 1881.563 kb on - strand at 1881.563 kb on - strand at 1881.636 kb on + strand at 1881.636 kb on + strand at 1881.636 kb on + strand at 1881.636 kb on + strand at 1881.637 kb on - strand at 1881.637 kb on - strand at 1881.637 kb on - strand at 1881.637 kb on - strand at 1881.637 kb on - strand at 1881.769 kb on + strand at 1881.769 kb on + strand at 1881.770 kb on - strand at 1881.770 kb on - strand at 1881.849 kb on + strand at 1881.849 kb on + strand at 1881.849 kb on + strand at 1881.849 kb on + strand at 1881.849 kb on + strand at 1881.850 kb on - strand at 1881.850 kb on - strand at 1881.850 kb on - strand at 1881.850 kb on - strand at 1881.850 kb on - strand at 1881.853 kb on + strand at 1881.853 kb on + strand at 1881.853 kb on + strand at 1881.854 kb on - strand at 1881.854 kb on - strand at 1881.854 kb on - strand at 1881.854 kb on - strand at 1881.854 kb on - strand at 1881.854 kb on - strand at 1881.967 kb on + strand at 1882.032 kb on + strand, within ABZR87_RS08855 at 1882.033 kb on - strand, within ABZR87_RS08855 at 1882.033 kb on - strand, within ABZR87_RS08855 at 1882.033 kb on - strand, within ABZR87_RS08855 at 1882.033 kb on - strand, within ABZR87_RS08855 at 1882.069 kb on + strand, within ABZR87_RS08855 at 1882.069 kb on + strand, within ABZR87_RS08855 at 1882.070 kb on - strand, within ABZR87_RS08855 at 1882.070 kb on - strand, within ABZR87_RS08855 at 1882.070 kb on - strand, within ABZR87_RS08855 at 1882.070 kb on - strand, within ABZR87_RS08855 at 1882.070 kb on - strand, within ABZR87_RS08855 at 1882.281 kb on + strand, within ABZR87_RS08855 at 1882.281 kb on + strand, within ABZR87_RS08855 at 1882.282 kb on - strand, within ABZR87_RS08855 at 1882.454 kb on + strand, within ABZR87_RS08855 at 1882.469 kb on + strand, within ABZR87_RS08855 at 1882.514 kb on + strand, within ABZR87_RS08855 at 1882.515 kb on - strand, within ABZR87_RS08855 at 1882.658 kb on + strand, within ABZR87_RS08855 at 1882.658 kb on + strand, within ABZR87_RS08855 at 1882.658 kb on + strand, within ABZR87_RS08855 at 1882.658 kb on + strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.659 kb on - strand, within ABZR87_RS08855 at 1882.698 kb on - strand, within ABZR87_RS08855 at 1882.698 kb on - strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.778 kb on + strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1882.779 kb on - strand, within ABZR87_RS08855 at 1883.023 kb on + strand at 1883.024 kb on - strand at 1883.024 kb on - strand at 1883.024 kb on - strand at 1883.024 kb on - strand at 1883.024 kb on - strand at 1883.024 kb on - strand at 1883.064 kb on + strand at 1883.065 kb on - strand at 1883.065 kb on - strand at 1883.066 kb on + strand at 1883.066 kb on + strand at 1883.066 kb on + strand at 1883.067 kb on - strand at 1883.067 kb on - strand at 1883.067 kb on - strand at 1883.067 kb on - strand at 1883.067 kb on - strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.068 kb on + strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.069 kb on - strand at 1883.113 kb on + strand at 1883.114 kb on - strand at 1883.184 kb on + strand at 1883.184 kb on + strand at 1883.184 kb on + strand at 1883.185 kb on - strand at 1883.199 kb on + strand at 1883.199 kb on + strand at 1883.199 kb on + strand at 1883.200 kb on - strand at 1883.200 kb on - strand at 1883.328 kb on + strand, within ABZR87_RS08860 at 1883.328 kb on + strand, within ABZR87_RS08860 at 1883.328 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.334 kb on + strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.335 kb on - strand, within ABZR87_RS08860 at 1883.436 kb on + strand, within ABZR87_RS08860 at 1883.436 kb on + strand, within ABZR87_RS08860 at 1883.437 kb on - strand, within ABZR87_RS08860 at 1883.437 kb on - strand, within ABZR87_RS08860 at 1883.478 kb on + strand, within ABZR87_RS08860 at 1883.479 kb on - strand, within ABZR87_RS08860 at 1883.479 kb on - strand, within ABZR87_RS08860 at 1883.592 kb on + strand, within ABZR87_RS08860 at 1883.593 kb on - strand, within ABZR87_RS08860 at 1883.593 kb on - strand, within ABZR87_RS08860 at 1883.661 kb on + strand, within ABZR87_RS08860 at 1883.662 kb on - strand, within ABZR87_RS08860 at 1883.662 kb on - strand, within ABZR87_RS08860 at 1883.662 kb on - strand, within ABZR87_RS08860 at 1883.677 kb on - strand, within ABZR87_RS08860 at 1883.728 kb on + strand, within ABZR87_RS08860 at 1883.728 kb on + strand, within ABZR87_RS08860 at 1883.729 kb on - strand, within ABZR87_RS08860 at 1883.729 kb on - strand, within ABZR87_RS08860
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 1,881,351 + -0.5 1,881,407 + -0.0 1,881,429 - -0.2 1,881,479 + +0.5 1,881,479 + -0.1 1,881,479 + -1.1 1,881,479 + -0.2 1,881,479 + -0.8 1,881,479 + -0.5 1,881,479 + +0.4 1,881,480 - +0.2 1,881,562 + -1.5 1,881,562 + +0.3 1,881,562 + -0.2 1,881,563 - +0.0 1,881,563 - +0.3 1,881,563 - -1.1 1,881,563 - +0.2 1,881,636 + +0.6 1,881,636 + +0.5 1,881,636 + +0.3 1,881,636 + +0.0 1,881,637 - -0.2 1,881,637 - +1.0 1,881,637 - +0.3 1,881,637 - +0.3 1,881,637 - -1.3 1,881,769 + -0.7 1,881,769 + +0.0 1,881,770 - -0.4 1,881,770 - +0.0 1,881,849 + -0.2 1,881,849 + +0.8 1,881,849 + -0.2 1,881,849 + +0.3 1,881,849 + -1.3 1,881,850 - +0.3 1,881,850 - +0.1 1,881,850 - -0.2 1,881,850 - +0.2 1,881,850 - -0.6 1,881,853 + -0.3 1,881,853 + -0.3 1,881,853 + +0.2 1,881,854 - +0.4 1,881,854 - +0.6 1,881,854 - -1.8 1,881,854 - -1.1 1,881,854 - +1.5 1,881,854 - +0.0 1,881,967 + +0.5 1,882,032 + ABZR87_RS08855 0.15 -0.5 1,882,033 - ABZR87_RS08855 0.15 +0.3 1,882,033 - ABZR87_RS08855 0.15 -0.8 1,882,033 - ABZR87_RS08855 0.15 -1.0 1,882,033 - ABZR87_RS08855 0.15 -0.2 1,882,069 + ABZR87_RS08855 0.18 -1.8 1,882,069 + ABZR87_RS08855 0.18 -1.2 1,882,070 - ABZR87_RS08855 0.18 +0.1 1,882,070 - ABZR87_RS08855 0.18 +0.6 1,882,070 - ABZR87_RS08855 0.18 -1.1 1,882,070 - ABZR87_RS08855 0.18 -1.7 1,882,070 - ABZR87_RS08855 0.18 -1.1 1,882,281 + ABZR87_RS08855 0.36 -1.4 1,882,281 + ABZR87_RS08855 0.36 +0.9 1,882,282 - ABZR87_RS08855 0.36 +0.1 1,882,454 + ABZR87_RS08855 0.50 +1.3 1,882,469 + ABZR87_RS08855 0.52 +0.0 1,882,514 + ABZR87_RS08855 0.55 -0.1 1,882,515 - ABZR87_RS08855 0.55 -1.4 1,882,658 + ABZR87_RS08855 0.68 -1.2 1,882,658 + ABZR87_RS08855 0.68 -0.3 1,882,658 + ABZR87_RS08855 0.68 +1.0 1,882,658 + ABZR87_RS08855 0.68 -1.6 1,882,659 - ABZR87_RS08855 0.68 -0.1 1,882,659 - ABZR87_RS08855 0.68 +0.3 1,882,659 - ABZR87_RS08855 0.68 -1.5 1,882,659 - ABZR87_RS08855 0.68 +0.9 1,882,659 - ABZR87_RS08855 0.68 -0.6 1,882,659 - ABZR87_RS08855 0.68 -0.6 1,882,659 - ABZR87_RS08855 0.68 -0.6 1,882,698 - ABZR87_RS08855 0.71 -0.1 1,882,698 - ABZR87_RS08855 0.71 +1.1 1,882,778 + ABZR87_RS08855 0.78 +0.5 1,882,778 + ABZR87_RS08855 0.78 -0.9 1,882,778 + ABZR87_RS08855 0.78 +0.6 1,882,778 + ABZR87_RS08855 0.78 -1.3 1,882,778 + ABZR87_RS08855 0.78 -2.0 1,882,778 + ABZR87_RS08855 0.78 -0.5 1,882,778 + ABZR87_RS08855 0.78 -0.2 1,882,779 - ABZR87_RS08855 0.78 +1.6 1,882,779 - ABZR87_RS08855 0.78 -1.3 1,882,779 - ABZR87_RS08855 0.78 -0.5 1,882,779 - ABZR87_RS08855 0.78 +0.5 1,882,779 - ABZR87_RS08855 0.78 -0.5 1,882,779 - ABZR87_RS08855 0.78 +1.7 1,882,779 - ABZR87_RS08855 0.78 -0.3 1,883,023 + +0.0 1,883,024 - -0.4 1,883,024 - +2.1 1,883,024 - +0.4 1,883,024 - -0.5 1,883,024 - -0.5 1,883,024 - -1.0 1,883,064 + -0.2 1,883,065 - +0.8 1,883,065 - -0.4 1,883,066 + -0.6 1,883,066 + +0.1 1,883,066 + +0.2 1,883,067 - +0.2 1,883,067 - -1.1 1,883,067 - +0.5 1,883,067 - -0.3 1,883,067 - +0.7 1,883,068 + -2.3 1,883,068 + +0.3 1,883,068 + +0.2 1,883,068 + +0.0 1,883,068 + +1.2 1,883,068 + -0.0 1,883,068 + +0.5 1,883,068 + -0.8 1,883,069 - -0.0 1,883,069 - +1.1 1,883,069 - +1.3 1,883,069 - -0.5 1,883,069 - +1.5 1,883,069 - -0.2 1,883,069 - -0.5 1,883,069 - -0.3 1,883,069 - -0.2 1,883,113 + +0.4 1,883,114 - +0.1 1,883,184 + +0.2 1,883,184 + +0.2 1,883,184 + -0.2 1,883,185 - -2.0 1,883,199 + -0.9 1,883,199 + -0.5 1,883,199 + -0.5 1,883,200 - +1.5 1,883,200 - -0.3 1,883,328 + ABZR87_RS08860 0.18 +0.5 1,883,328 + ABZR87_RS08860 0.18 -0.3 1,883,328 + ABZR87_RS08860 0.18 +0.7 1,883,334 + ABZR87_RS08860 0.18 +0.5 1,883,334 + ABZR87_RS08860 0.18 -0.1 1,883,334 + ABZR87_RS08860 0.18 +0.7 1,883,334 + ABZR87_RS08860 0.18 -0.2 1,883,334 + ABZR87_RS08860 0.18 -0.2 1,883,334 + ABZR87_RS08860 0.18 -0.2 1,883,335 - ABZR87_RS08860 0.18 -0.1 1,883,335 - ABZR87_RS08860 0.18 +0.1 1,883,335 - ABZR87_RS08860 0.18 -1.3 1,883,335 - ABZR87_RS08860 0.18 -0.3 1,883,335 - ABZR87_RS08860 0.18 +0.7 1,883,335 - ABZR87_RS08860 0.18 -0.1 1,883,335 - ABZR87_RS08860 0.18 +0.0 1,883,335 - ABZR87_RS08860 0.18 -0.4 1,883,335 - ABZR87_RS08860 0.18 -3.5 1,883,436 + ABZR87_RS08860 0.27 +0.5 1,883,436 + ABZR87_RS08860 0.27 -0.9 1,883,437 - ABZR87_RS08860 0.27 +0.8 1,883,437 - ABZR87_RS08860 0.27 +0.2 1,883,478 + ABZR87_RS08860 0.30 -0.0 1,883,479 - ABZR87_RS08860 0.30 -0.6 1,883,479 - ABZR87_RS08860 0.30 +0.8 1,883,592 + ABZR87_RS08860 0.40 +1.0 1,883,593 - ABZR87_RS08860 0.40 +0.2 1,883,593 - ABZR87_RS08860 0.40 -0.4 1,883,661 + ABZR87_RS08860 0.46 +0.0 1,883,662 - ABZR87_RS08860 0.46 +0.2 1,883,662 - ABZR87_RS08860 0.46 -0.2 1,883,662 - ABZR87_RS08860 0.46 -0.2 1,883,677 - ABZR87_RS08860 0.47 +0.9 1,883,728 + ABZR87_RS08860 0.51 +1.5 1,883,728 + ABZR87_RS08860 0.51 +0.5 1,883,729 - ABZR87_RS08860 0.51 +0.7 1,883,729 - ABZR87_RS08860 0.51 +0.4
Or see this region's nucleotide sequence